RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, human

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA4-206	ENST00000484388	FAM163A	Q96GL9	167 aa	Predicted RBP	4.22	□□□□□ -1.73
ABCA4-206	ENST00000484388	GJD4	Q96KN9	370 aa	Predicted RBP	4.22	□□□□□ -1.73
ABCA4-206	ENST00000484388	MORN1	Q5T089	497 aa		4.21	□□□□□ -1.74
ABCA4-206	ENST00000484388	HELB	Q8NG08	1087 aa	Predicted RBP	4.21	□□□□□ -1.74
ABCA4-206	ENST00000484388	LRCH3	Q96II8	777 aa		4.21	□□□□□ -1.74
ABCA4-206	ENST00000484388	PRR14	Q9BWN1	585 aa		4.21	□□□□□ -1.74
ABCA4-206	ENST00000484388	GDPD2	Q9HCC8	539 aa		4.21	□□□□□ -1.74
ABCA4-206	ENST00000484388	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	4.21	□□□□□ -1.74
ABCA4-206	ENST00000484388	ZNF777	Q9ULD5	760 aa	Predicted RBP	4.21	□□□□□ -1.74
ABCA4-206	ENST00000484388	CFAP99	D6REC4	459 aa		4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	C6orf229	H3BNL8	230 aa		4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	CTDSPL2	Q05D32	466 aa		4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388		Q3C1V9	767 aa		4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	LCE2D	Q5TA82	110 aa	Predicted RBP	4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	DESI1	Q6ICB0	168 aa		4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	CCDC82	Q8N4S0	544 aa		4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	ARID3A	Q99856	593 aa		4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	PLSCR2	Q9NRY7	297 aa		4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	SERPINA10	Q9UK55	444 aa		4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	ZNF330	Q9Y3S2	320 aa	Predicted RBP	4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	SALL2	Q9Y467	1007 aa	Predicted RBP	4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	NDUFB9	Q9Y6M9	179 aa		4.2	□□□□□ -1.74
ABCA4-206	ENST00000484388	SOWAHB	A6NEL2	793 aa		4.19	□□□□□ -1.74
ABCA4-206	ENST00000484388	RNF40	O75150	1001 aa		4.19	□□□□□ -1.74
ABCA4-206	ENST00000484388	ABL2	P42684	1182 aa		4.19	□□□□□ -1.74
ABCA4-206	ENST00000484388	RETREG3	Q86VR2	466 aa		4.19	□□□□□ -1.74
ABCA4-206	ENST00000484388	ANKK1	Q8NFD2	765 aa		4.19	□□□□□ -1.74
ABCA4-206	ENST00000484388	TRIM34	Q9BYJ4	488 aa		4.19	□□□□□ -1.74
ABCA4-206	ENST00000484388	TBC1D2B	Q9UPU7	963 aa		4.19	□□□□□ -1.74
ABCA4-206	ENST00000484388	PPP4C	P60510	307 aa		4.18	□□□□□ -1.74
ABCA4-206	ENST00000484388	WASHC4	Q2M389	1173 aa		4.18	□□□□□ -1.74
ABCA4-206	ENST00000484388	PRR7	Q8TB68	274 aa		4.18	□□□□□ -1.74
ABCA4-206	ENST00000484388	CCDC97	Q96F63	343 aa	Predicted RBP	4.18	□□□□□ -1.74
ABCA4-206	ENST00000484388	STAC3	Q96MF2	364 aa		4.18	□□□□□ -1.74
ABCA4-206	ENST00000484388	HMX1	Q9NP08	348 aa	Predicted RBP	4.18	□□□□□ -1.74
ABCA4-206	ENST00000484388	TSR3	Q9UJK0	312 aa	Known RBP	4.18	□□□□□ -1.74
ABCA4-206	ENST00000484388	SLC27A5	Q9Y2P5	690 aa		4.18	□□□□□ -1.74
ABCA4-206	ENST00000484388	GOLGA8CP	A6NN73	597 aa		4.17	□□□□□ -1.74
ABCA4-206	ENST00000484388	GPR37L1	O60883	481 aa		4.17	□□□□□ -1.74
ABCA4-206	ENST00000484388	IRF5	Q13568	498 aa		4.17	□□□□□ -1.74
ABCA4-206	ENST00000484388	LRRN4	Q8WUT4	740 aa		4.17	□□□□□ -1.74
ABCA4-206	ENST00000484388	SYMPK	Q92797	1274 aa	Known RBP	4.17	□□□□□ -1.74
ABCA4-206	ENST00000484388	APLP1	P51693	650 aa		4.16	□□□□□ -1.74
ABCA4-206	ENST00000484388	PUS10	Q3MIT2	529 aa	Known RBP	4.16	□□□□□ -1.74
ABCA4-206	ENST00000484388	BRICD5	Q6PL45	260 aa		4.16	□□□□□ -1.74
ABCA4-206	ENST00000484388	LYPD8	Q6UX82	237 aa		4.16	□□□□□ -1.74
ABCA4-206	ENST00000484388	ANKRD13D	Q6ZTN6	518 aa		4.16	□□□□□ -1.74
ABCA4-206	ENST00000484388	TSC1	Q92574	1164 aa		4.16	□□□□□ -1.74
ABCA4-206	ENST00000484388	HPS5	Q9UPZ3	1129 aa		4.16	□□□□□ -1.74
ABCA4-206	ENST00000484388	NR1I2	O75469	434 aa		4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	FMNL1	O95466	1100 aa	Predicted RBP	4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	BCAM	P50895	628 aa		4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	BLOC1S3	Q6QNY0	202 aa		4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	SCUBE3	Q8IX30	993 aa		4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	GLMN	Q92990	594 aa		4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	WNT2B	Q93097	391 aa		4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	THAP11	Q96EK4	314 aa		4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	CALR3	Q96L12	384 aa	Known RBP	4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	USB1	Q9BQ65	265 aa	Known RBP	4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	PCDHB3	Q9Y5E6	796 aa		4.15	□□□□□ -1.75
ABCA4-206	ENST00000484388	POM121C	A8CG34	1229 aa		4.14	□□□□□ -1.75
ABCA4-206	ENST00000484388	PER1	O15534	1290 aa	Predicted RBP	4.14	□□□□□ -1.75
ABCA4-206	ENST00000484388	SOX11	P35716	441 aa		4.14	□□□□□ -1.75
ABCA4-206	ENST00000484388	RNF19B	Q6ZMZ0	732 aa		4.14	□□□□□ -1.75
ABCA4-206	ENST00000484388	PNMA1	Q8ND90	353 aa		4.14	□□□□□ -1.75
ABCA4-206	ENST00000484388	EPS8L1	Q8TE68	723 aa		4.14	□□□□□ -1.75
ABCA4-206	ENST00000484388	PPP1R15A	O75807	674 aa	Predicted RBP	4.13	□□□□□ -1.75
ABCA4-206	ENST00000484388	F12	P00748	615 aa	Predicted RBP	4.13	□□□□□ -1.75
ABCA4-206	ENST00000484388	JUND	P17535	347 aa		4.13	□□□□□ -1.75
ABCA4-206	ENST00000484388	NR6A1	Q15406	480 aa		4.13	□□□□□ -1.75
ABCA4-206	ENST00000484388	MSS51	Q4VC12	460 aa		4.13	□□□□□ -1.75
ABCA4-206	ENST00000484388	NYAP1	Q6ZVC0	841 aa		4.13	□□□□□ -1.75
ABCA4-206	ENST00000484388	KRTAP3-3	Q9BYR6	98 aa		4.13	□□□□□ -1.75
ABCA4-206	ENST00000484388	KRTAP3-2	Q9BYR7	98 aa		4.13	□□□□□ -1.75
ABCA4-206	ENST00000484388	VAC14	Q08AM6	782 aa		4.12	□□□□□ -1.75
ABCA4-206	ENST00000484388	PTPRN	Q16849	979 aa		4.12	□□□□□ -1.75
ABCA4-206	ENST00000484388	HDGFL1	Q5TGJ6	251 aa		4.12	□□□□□ -1.75
ABCA4-206	ENST00000484388	THSD4	Q6ZMP0	1018 aa		4.12	□□□□□ -1.75
ABCA4-206	ENST00000484388	ADAMTS19	Q8TE59	1207 aa		4.12	□□□□□ -1.75
ABCA4-206	ENST00000484388	ALG2	Q9H553	416 aa		4.12	□□□□□ -1.75
ABCA4-206	ENST00000484388	WBP1L	Q9NX94	342 aa		4.12	□□□□□ -1.75
ABCA4-206	ENST00000484388	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.12	□□□□□ -1.75
ABCA4-206	ENST00000484388	DXO	O77932	396 aa	Known RBP	4.11	□□□□□ -1.75
ABCA4-206	ENST00000484388	PDIA4	P13667	645 aa	Known RBP	4.11	□□□□□ -1.75
ABCA4-206	ENST00000484388	MMP16	P51512	607 aa		4.11	□□□□□ -1.75
ABCA4-206	ENST00000484388	FAM160A2	Q8N612	972 aa	Predicted RBP	4.11	□□□□□ -1.75
ABCA4-206	ENST00000484388	FKBPL	Q9UIM3	349 aa		4.11	□□□□□ -1.75
ABCA4-206	ENST00000484388	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
ABCA4-206	ENST00000484388	NR1H3	Q13133	447 aa		4.1	□□□□□ -1.75
ABCA4-206	ENST00000484388	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	4.1	□□□□□ -1.75
ABCA4-206	ENST00000484388	SPSB2	Q99619	263 aa		4.1	□□□□□ -1.75
ABCA4-206	ENST00000484388	TRAIP	Q9BWF2	469 aa		4.1	□□□□□ -1.75
ABCA4-206	ENST00000484388	PPP1R12C	Q9BZL4	782 aa		4.1	□□□□□ -1.75
ABCA4-206	ENST00000484388	EVA1B	Q9NVM1	165 aa		4.1	□□□□□ -1.75
ABCA4-206	ENST00000484388	ZBBX	A8MT70	800 aa		4.09	□□□□□ -1.75
ABCA4-206	ENST00000484388	CCNYL3	P0C7X3	344 aa		4.09	□□□□□ -1.75
ABCA4-206	ENST00000484388	PDE4C	Q08493	712 aa		4.09	□□□□□ -1.75
ABCA4-206	ENST00000484388	SEMA3F	Q13275	785 aa		4.09	□□□□□ -1.75
ABCA4-206	ENST00000484388	CFAP70	Q5T0N1	1121 aa		4.09	□□□□□ -1.75
ABCA4-206	ENST00000484388	ARMC2	Q8NEN0	867 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms