RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-208ENST00000483564 MAPK8IP2Q13387 824 aaPredicted RBP11.59□□□□□ -0.55
GABRE-208ENST00000483564 NEUROD2Q15784 382 aa11.59□□□□□ -0.55
GABRE-208ENST00000483564 UTP14CQ5TAP6 766 aaKnown RBP11.59□□□□□ -0.55
GABRE-208ENST00000483564 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.59□□□□□ -0.55
GABRE-208ENST00000483564 ARHGEF5Q12774 1597 aa11.59□□□□□ -0.55
GABRE-208ENST00000483564 TTC37Q6PGP7 1564 aa11.59□□□□□ -0.55
GABRE-208ENST00000483564 MSNP26038 577 aaKnown RBP11.59□□□□□ -0.55
GABRE-208ENST00000483564 TNNT2P45379 298 aaPredicted RBP11.59□□□□□ -0.55
GABRE-208ENST00000483564 ANKRD30AQ9BXX3 1397 aa11.58□□□□□ -0.56
GABRE-208ENST00000483564 COL17A1Q9UMD9 1497 aaPredicted RBP11.58□□□□□ -0.56
GABRE-208ENST00000483564 ZBTB22O15209 634 aa11.58□□□□□ -0.56
GABRE-208ENST00000483564 PRAG1Q86YV5 1406 aa11.58□□□□□ -0.56
GABRE-208ENST00000483564 ERBINQ96RT1 1412 aa11.58□□□□□ -0.56
GABRE-208ENST00000483564 SHANK2Q9UPX8 1470 aa11.58□□□□□ -0.56
GABRE-208ENST00000483564 ARHGEF12Q9NZN5 1544 aa11.58□□□□□ -0.56
GABRE-208ENST00000483564 ADGRL2O95490 1459 aa11.57□□□□□ -0.56
GABRE-208ENST00000483564 MAGI2Q86UL8 1455 aa11.57□□□□□ -0.56
GABRE-208ENST00000483564 WDR7Q9Y4E6 1490 aa11.57□□□□□ -0.56
GABRE-208ENST00000483564 NPM1P06748 294 aaKnown RBP eCLIP11.57□□□□□ -0.56
GABRE-208ENST00000483564 PMFBP1Q8TBY8 1022 aa11.57□□□□□ -0.56
GABRE-208ENST00000483564 ZSCAN30Q86W11 494 aa11.57□□□□□ -0.56
GABRE-208ENST00000483564 HSCBQ8IWL3 235 aa11.57□□□□□ -0.56
GABRE-208ENST00000483564 ARHGAP5Q13017 1502 aa11.56□□□□□ -0.56
GABRE-208ENST00000483564 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
GABRE-208ENST00000483564 RTEL1-TNFRSF6BF6WH68 1400 aa11.56□□□□□ -0.56
GABRE-208ENST00000483564 DDIT3P35638 169 aa11.56□□□□□ -0.56
GABRE-208ENST00000483564 RRP7AQ9Y3A4 280 aaKnown RBP11.56□□□□□ -0.56
GABRE-208ENST00000483564 SAMD9LQ8IVG5 1584 aa11.56□□□□□ -0.56
GABRE-208ENST00000483564 PLCH2O75038 1416 aa11.56□□□□□ -0.56
GABRE-208ENST00000483564 ISY1Q9ULR0 285 aaKnown RBP11.56□□□□□ -0.56
GABRE-208ENST00000483564 NASPP49321 788 aaPredicted RBP11.55□□□□□ -0.56
GABRE-208ENST00000483564 TSPY4P0CV99 314 aa11.54□□□□□ -0.56
GABRE-208ENST00000483564 TSPY10P0CW01 314 aa11.54□□□□□ -0.56
GABRE-208ENST00000483564 RARSP54136 660 aaKnown RBP11.54□□□□□ -0.56
GABRE-208ENST00000483564 XPCQ01831 940 aaPredicted RBP11.54□□□□□ -0.56
GABRE-208ENST00000483564 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
GABRE-208ENST00000483564 CCDC173Q0VFZ6 552 aa11.54□□□□□ -0.56
GABRE-208ENST00000483564 PPP1R9BQ96SB3 815 aa11.54□□□□□ -0.56
GABRE-208ENST00000483564 CBX1P83916 185 aa11.53□□□□□ -0.56
GABRE-208ENST00000483564 RWDD1Q9H446 243 aaPredicted RBP11.53□□□□□ -0.56
GABRE-208ENST00000483564 VIRMAQ69YN4 1812 aaKnown RBP11.53□□□□□ -0.56
GABRE-208ENST00000483564 TERF1P54274 439 aa11.53□□□□□ -0.56
GABRE-208ENST00000483564 EFCAB2Q5VUJ9 269 aa11.53□□□□□ -0.56
GABRE-208ENST00000483564 ABCA9Q8IUA7 1624 aa11.53□□□□□ -0.56
GABRE-208ENST00000483564 CCDC141Q6ZP82 1450 aa11.53□□□□□ -0.56
GABRE-208ENST00000483564 ASXL2Q76L83 1435 aa11.53□□□□□ -0.56
GABRE-208ENST00000483564 CD2BP2O95400 341 aaKnown RBP11.52□□□□□ -0.56
GABRE-208ENST00000483564 MTERF4Q7Z6M4 381 aaKnown RBP11.52□□□□□ -0.56
GABRE-208ENST00000483564 CCDC94Q9BW85 323 aaPredicted RBP11.52□□□□□ -0.56
GABRE-208ENST00000483564 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.57
GABRE-208ENST00000483564 CDK11BP21127 795 aaKnown RBP11.51□□□□□ -0.57
GABRE-208ENST00000483564 RAB3GAP1Q15042 981 aa11.51□□□□□ -0.57
GABRE-208ENST00000483564 ZFP91Q96JP5 570 aaPredicted RBP11.51□□□□□ -0.57
GABRE-208ENST00000483564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.51□□□□□ -0.574e-13■■□□□ 12.7
GABRE-208ENST00000483564 GPRASP1Q5JY77 1395 aa11.51□□□□□ -0.57
GABRE-208ENST00000483564 MAST1Q9Y2H9 1570 aa11.51□□□□□ -0.57
GABRE-208ENST00000483564 ZBTB7CA1YPR0 619 aa11.51□□□□□ -0.57
GABRE-208ENST00000483564 FTSJ3Q8IY81 847 aaKnown RBP11.51□□□□□ -0.57
GABRE-208ENST00000483564 GBP4Q96PP9 640 aa11.51□□□□□ -0.57
GABRE-208ENST00000483564 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
GABRE-208ENST00000483564 KIF20AO95235 890 aa11.51□□□□□ -0.57
GABRE-208ENST00000483564 HSP90AB1P08238 724 aaKnown RBP11.51□□□□□ -0.57
GABRE-208ENST00000483564 SSFA2P28290 1259 aa11.51□□□□□ -0.57
GABRE-208ENST00000483564 KDM5DQ9BY66 1539 aa11.5□□□□□ -0.57
GABRE-208ENST00000483564 IGSF3O75054 1194 aa11.5□□□□□ -0.57
GABRE-208ENST00000483564 HNRNPMP52272 730 aaKnown RBP eCLIP11.5□□□□□ -0.57
GABRE-208ENST00000483564 SMC5Q8IY18 1101 aa11.5□□□□□ -0.57
GABRE-208ENST00000483564 JARID2Q92833 1246 aaPredicted RBP11.5□□□□□ -0.57
GABRE-208ENST00000483564 SYCP2Q9BX26 1530 aa11.49□□□□□ -0.57
GABRE-208ENST00000483564 CCDC144AA2RUR9 1427 aa11.49□□□□□ -0.57
GABRE-208ENST00000483564 DYNC1I1O14576 645 aa11.49□□□□□ -0.57
GABRE-208ENST00000483564 SKOR2Q2VWA4 1001 aaPredicted RBP11.49□□□□□ -0.57
GABRE-208ENST00000483564 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
GABRE-208ENST00000483564 CHMP4AQ9BY43 222 aa11.49□□□□□ -0.57
GABRE-208ENST00000483564 CGNQ9P2M7 1197 aaKnown RBP11.49□□□□□ -0.57
GABRE-208ENST00000483564 DDX49Q9Y6V7 483 aaKnown RBP11.49□□□□□ -0.57
GABRE-208ENST00000483564 RIMBP3CA6NJZ7 1639 aa11.49□□□□□ -0.57
GABRE-208ENST00000483564 RIMBP3BA6NNM3 1639 aa11.49□□□□□ -0.57
GABRE-208ENST00000483564 RIMBP3Q9UFD9 1639 aa11.49□□□□□ -0.57
GABRE-208ENST00000483564 TRPM1Q7Z4N2 1603 aa11.48□□□□□ -0.57
GABRE-208ENST00000483564 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
GABRE-208ENST00000483564 A2MP01023 1474 aa11.48□□□□□ -0.57
GABRE-208ENST00000483564 ABCC1P33527 1531 aa11.48□□□□□ -0.57
GABRE-208ENST00000483564 DNTTIP2Q5QJE6 756 aaKnown RBP11.48□□□□□ -0.57
GABRE-208ENST00000483564 LETM1O95202 739 aaPredicted RBP11.47□□□□□ -0.57
GABRE-208ENST00000483564 KIF2CQ99661 725 aa11.47□□□□□ -0.57
GABRE-208ENST00000483564 GTPBP4Q9BZE4 634 aaKnown RBP11.47□□□□□ -0.57
GABRE-208ENST00000483564 TSC1Q92574 1164 aa11.46□□□□□ -0.57
GABRE-208ENST00000483564 SNX21Q969T3 373 aa11.46□□□□□ -0.57
GABRE-208ENST00000483564 RBSNQ9H1K0 784 aa11.46□□□□□ -0.57
GABRE-208ENST00000483564 MVPQ14764 893 aaKnown RBP11.46□□□□□ -0.58
GABRE-208ENST00000483564 NOL7Q9UMY1 257 aaKnown RBP11.46□□□□□ -0.58
GABRE-208ENST00000483564 PLXNC1O60486 1568 aa11.45□□□□□ -0.58
GABRE-208ENST00000483564 PIK3C2GO75747 1445 aa11.45□□□□□ -0.58
GABRE-208ENST00000483564 RBM25P49756 843 aaKnown RBP11.45□□□□□ -0.58
GABRE-208ENST00000483564 CAVIN1Q6NZI2 390 aaKnown RBP11.45□□□□□ -0.58
GABRE-208ENST00000483564 DHX37Q8IY37 1157 aaKnown RBP11.45□□□□□ -0.58
GABRE-208ENST00000483564 NINLQ9Y2I6 1382 aa11.45□□□□□ -0.58
GABRE-208ENST00000483564 PLA2R1Q13018 1463 aa11.45□□□□□ -0.58
GABRE-208ENST00000483564 GAS2L2Q8NHY3 880 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms