RNA–Protein interactions for RNA: ENST00000483561.2

DENND4B-209, Transcript of DENN domain containing 4B, human

TSL 4

Gene DENND4B, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4B-209	ENST00000483561	KDM2A	Q9Y2K7	1162 aa		33.8	■■■■□ 3
DENND4B-209	ENST00000483561	CDC42BPG	Q6DT37	1551 aa		33.79	■■■■□ 3
DENND4B-209	ENST00000483561	ORAI2	Q96SN7	254 aa		33.78	■■■■□ 3
DENND4B-209	ENST00000483561	DCAF11	Q8TEB1	546 aa		33.77	■■■■□ 3
DENND4B-209	ENST00000483561	LRP6	O75581	1613 aa		33.75	■■■□□ 2.99
DENND4B-209	ENST00000483561	DHX57	Q6P158	1386 aa	Known RBP	33.73	■■■□□ 2.99
DENND4B-209	ENST00000483561	SPATA31A6	Q5VVP1	1343 aa		33.7	■■■□□ 2.99
DENND4B-209	ENST00000483561	NUTM2F	A1L443	756 aa		33.69	■■■□□ 2.98
DENND4B-209	ENST00000483561	ADGRB1	O14514	1584 aa		33.68	■■■□□ 2.98
DENND4B-209	ENST00000483561	FMN2	Q9NZ56	1722 aa		33.68	■■■□□ 2.98
DENND4B-209	ENST00000483561	SIRT1	Q96EB6	747 aa		33.66	■■■□□ 2.98
DENND4B-209	ENST00000483561	POTEA	Q6S8J7	498 aa		33.65	■■■□□ 2.98
DENND4B-209	ENST00000483561	LRRC59	Q96AG4	307 aa	Known RBP	33.65	■■■□□ 2.98
DENND4B-209	ENST00000483561	RGPD8	O14715	1765 aa	Predicted RBP	33.65	■■■□□ 2.98
DENND4B-209	ENST00000483561	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.64	■■■□□ 2.98
DENND4B-209	ENST00000483561	NUTM2E	B1AL46	878 aa	Predicted RBP	33.64	■■■□□ 2.98
DENND4B-209	ENST00000483561	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.64	■■■□□ 2.98
DENND4B-209	ENST00000483561	ESCO1	Q5FWF5	840 aa		33.64	■■■□□ 2.98
DENND4B-209	ENST00000483561	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.64	■■■□□ 2.98
DENND4B-209	ENST00000483561	PRAM1	Q96QH2	718 aa		33.62	■■■□□ 2.97
DENND4B-209	ENST00000483561	DLC1	Q96QB1	1528 aa		33.62	■■■□□ 2.97
DENND4B-209	ENST00000483561	MEX3C	Q5U5Q3	659 aa	Known RBP	33.61	■■■□□ 2.97
DENND4B-209	ENST00000483561	PNPLA6	Q8IY17	1366 aa		33.6	■■■□□ 2.97
DENND4B-209	ENST00000483561	SOS2	Q07890	1332 aa	Predicted RBP	33.59	■■■□□ 2.97
DENND4B-209	ENST00000483561	TRAK1	Q9UPV9	953 aa		33.59	■■■□□ 2.97
DENND4B-209	ENST00000483561	STAC3	Q96MF2	364 aa		33.58	■■■□□ 2.97
DENND4B-209	ENST00000483561	POGK	Q9P215	609 aa		33.56	■■■□□ 2.96
DENND4B-209	ENST00000483561	FOXO3	O43524	673 aa		33.53	■■■□□ 2.96
DENND4B-209	ENST00000483561	XPC	Q01831	940 aa	Predicted RBP	33.53	■■■□□ 2.96
DENND4B-209	ENST00000483561	PXDN	Q92626	1479 aa		33.51	■■■□□ 2.96
DENND4B-209	ENST00000483561	NPHP3	Q7Z494	1330 aa		33.51	■■■□□ 2.95
DENND4B-209	ENST00000483561	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.5	■■■□□ 2.95
DENND4B-209	ENST00000483561	KIF1A	Q12756	1690 aa		33.5	■■■□□ 2.95
DENND4B-209	ENST00000483561	ADGRB2	O60241	1585 aa		33.48	■■■□□ 2.95
DENND4B-209	ENST00000483561	KIAA1210	Q9ULL0	1709 aa		33.48	■■■□□ 2.95
DENND4B-209	ENST00000483561	USP32	Q8NFA0	1604 aa		33.47	■■■□□ 2.95
DENND4B-209	ENST00000483561	SIN3A	Q96ST3	1273 aa		33.47	■■■□□ 2.95
DENND4B-209	ENST00000483561	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.47	■■■□□ 2.95
DENND4B-209	ENST00000483561	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.47	■■■□□ 2.95
DENND4B-209	ENST00000483561	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.45	■■■□□ 2.95
DENND4B-209	ENST00000483561	ADAMTS2	O95450	1211 aa		33.41	■■■□□ 2.94
DENND4B-209	ENST00000483561	ZNF772	Q68DY9	489 aa	Predicted RBP	33.41	■■■□□ 2.94
DENND4B-209	ENST00000483561	C8orf37	Q96NL8	207 aa		33.41	■■■□□ 2.94
DENND4B-209	ENST00000483561	AFF2	P51816	1311 aa		33.41	■■■□□ 2.94
DENND4B-209	ENST00000483561	PHF8	Q9UPP1	1060 aa		33.4	■■■□□ 2.94
DENND4B-209	ENST00000483561	NBPF1	Q3BBV0	1214 aa		33.39	■■■□□ 2.94
DENND4B-209	ENST00000483561	NEUROD1	Q13562	356 aa		33.38	■■■□□ 2.93
DENND4B-209	ENST00000483561	L3MBTL2	Q969R5	705 aa		33.38	■■■□□ 2.93
DENND4B-209	ENST00000483561	KRT28	Q7Z3Y7	464 aa		33.36	■■■□□ 2.93
DENND4B-209	ENST00000483561	ANKAR	Q7Z5J8	1434 aa		33.36	■■■□□ 2.93
DENND4B-209	ENST00000483561	PMFBP1	Q8TBY8	1022 aa		33.34	■■■□□ 2.93
DENND4B-209	ENST00000483561	PRR36	Q9H6K5	1346 aa		33.33	■■■□□ 2.93
DENND4B-209	ENST00000483561	MARF1	Q9Y4F3	1742 aa	Known RBP	33.33	■■■□□ 2.93
DENND4B-209	ENST00000483561	WASL	O00401	505 aa	Predicted RBP	33.32	■■■□□ 2.92
DENND4B-209	ENST00000483561	TULP4	Q9NRJ4	1543 aa		33.32	■■■□□ 2.92
DENND4B-209	ENST00000483561	SPATA31A3	Q5VYP0	1347 aa		33.31	■■■□□ 2.92
DENND4B-209	ENST00000483561	TRIM26	Q12899	539 aa	Predicted RBP	33.31	■■■□□ 2.92
DENND4B-209	ENST00000483561	NGLY1	Q96IV0	654 aa		33.31	■■■□□ 2.92
DENND4B-209	ENST00000483561	EIF3A	Q14152	1382 aa	Known RBP	33.26	■■■□□ 2.92
DENND4B-209	ENST00000483561	TRPM1	Q7Z4N2	1603 aa		33.25	■■■□□ 2.91
DENND4B-209	ENST00000483561	PSME1	Q06323	249 aa		33.25	■■■□□ 2.91
DENND4B-209	ENST00000483561	TNS3	Q68CZ2	1445 aa		33.25	■■■□□ 2.91
DENND4B-209	ENST00000483561	RXRB	P28702	533 aa		33.24	■■■□□ 2.91
DENND4B-209	ENST00000483561	ITSN1	Q15811	1721 aa		33.23	■■■□□ 2.91
DENND4B-209	ENST00000483561	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.23	■■■□□ 2.91
DENND4B-209	ENST00000483561	PLEKHG5	O94827	1062 aa		33.22	■■■□□ 2.91
DENND4B-209	ENST00000483561	QTRT2	Q9H974	415 aa	Known RBP	33.22	■■■□□ 2.91
DENND4B-209	ENST00000483561	ATP7B	P35670	1465 aa		33.21	■■■□□ 2.91
DENND4B-209	ENST00000483561	SBNO1	A3KN83	1393 aa		33.21	■■■□□ 2.91
DENND4B-209	ENST00000483561	CDK19	Q9BWU1	502 aa		33.2	■■■□□ 2.91
DENND4B-209	ENST00000483561	LMOD2	Q6P5Q4	547 aa		33.19	■■■□□ 2.9
DENND4B-209	ENST00000483561	USP21	Q9UK80	565 aa		33.19	■■■□□ 2.9
DENND4B-209	ENST00000483561	ABCA3	Q99758	1704 aa		33.19	■■■□□ 2.9
DENND4B-209	ENST00000483561	QRICH2	Q9H0J4	1663 aa		33.18	■■■□□ 2.9
DENND4B-209	ENST00000483561	CABLES1	Q8TDN4	633 aa		33.18	■■■□□ 2.9
DENND4B-209	ENST00000483561	NUDT16	Q96DE0	195 aa	Known RBP	33.18	■■■□□ 2.9
DENND4B-209	ENST00000483561	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.16	■■■□□ 2.9
DENND4B-209	ENST00000483561	TOPAZ1	Q8N9V7	1692 aa		33.15	■■■□□ 2.9
DENND4B-209	ENST00000483561	ALS2	Q96Q42	1657 aa		33.15	■■■□□ 2.9
DENND4B-209	ENST00000483561	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.14	■■■□□ 2.9
DENND4B-209	ENST00000483561	NGDN	Q8NEJ9	315 aa	Known RBP	33.14	■■■□□ 2.9
DENND4B-209	ENST00000483561	GPRASP1	Q5JY77	1395 aa		33.13	■■■□□ 2.89
DENND4B-209	ENST00000483561	RBM6	P78332	1123 aa	Known RBP	33.13	■■■□□ 2.89
DENND4B-209	ENST00000483561	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.12	■■■□□ 2.89
DENND4B-209	ENST00000483561	NBPF8	Q3BBV2	869 aa		33.12	■■■□□ 2.89
DENND4B-209	ENST00000483561	ARHGEF10	O15013	1369 aa		33.11	■■■□□ 2.89
DENND4B-209	ENST00000483561	BCL9L	Q86UU0	1499 aa		33.1	■■■□□ 2.89
DENND4B-209	ENST00000483561	RGS12	O14924	1447 aa		33.1	■■■□□ 2.89
DENND4B-209	ENST00000483561	HAP1	P54257	671 aa	Predicted RBP	33.09	■■■□□ 2.89
DENND4B-209	ENST00000483561	ATRN	O75882	1429 aa		33.09	■■■□□ 2.89
DENND4B-209	ENST00000483561	ROCK2	O75116	1388 aa	Known RBP	33.09	■■■□□ 2.89
DENND4B-209	ENST00000483561	TRPC5	Q9UL62	973 aa	Predicted RBP	33.08	■■■□□ 2.89
DENND4B-209	ENST00000483561	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.05	■■■□□ 2.88
DENND4B-209	ENST00000483561	PAK3	O75914	559 aa	Predicted RBP	33.04	■■■□□ 2.88
DENND4B-209	ENST00000483561	PLCH1	Q4KWH8	1693 aa		33.04	■■■□□ 2.88
DENND4B-209	ENST00000483561	SLIT2	O94813	1529 aa		33.03	■■■□□ 2.88
DENND4B-209	ENST00000483561	CRYBG1	Q9Y4K1	1723 aa		33.03	■■■□□ 2.88
DENND4B-209	ENST00000483561	SRPK2	P78362	688 aa	Known RBP	33.03	■■■□□ 2.88
DENND4B-209	ENST00000483561	CABP2	Q9NPB3	220 aa		33.03	■■■□□ 2.88
DENND4B-209	ENST00000483561	CCDC61	Q9Y6R9	512 aa		33.03	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms