RNA–Protein interactions for RNA: ENST00000482863.1

PCOLCE-206, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-206ENST00000482863 SOS2Q07890 1332 aaPredicted RBP23.33■■□□□ 1.32
PCOLCE-206ENST00000482863 ESCO1Q5FWF5 840 aa23.32■■□□□ 1.32
PCOLCE-206ENST00000482863 XPCQ01831 940 aaPredicted RBP23.31■■□□□ 1.32
PCOLCE-206ENST00000482863 LRPPRCP42704 1394 aaKnown RBP23.29■■□□□ 1.32
PCOLCE-206ENST00000482863 ANKRD30BQ9BXX2 1392 aa23.29■■□□□ 1.32
PCOLCE-206ENST00000482863 UPF1Q92900 1129 aaKnown RBP eCLIP23.29■■□□□ 1.32
PCOLCE-206ENST00000482863 QTRT2Q9H974 415 aaKnown RBP23.29■■□□□ 1.32
PCOLCE-206ENST00000482863 IFT172Q9UG01 1749 aa23.29■■□□□ 1.32
PCOLCE-206ENST00000482863 PIK3C2GO75747 1445 aa23.27■■□□□ 1.32
PCOLCE-206ENST00000482863 LAMC1P11047 1609 aa23.27■■□□□ 1.32
PCOLCE-206ENST00000482863 NGLY1Q96IV0 654 aa23.27■■□□□ 1.32
PCOLCE-206ENST00000482863 FOXO3O43524 673 aa23.26■■□□□ 1.31
PCOLCE-206ENST00000482863 CFAP70Q5T0N1 1121 aa23.25■■□□□ 1.31
PCOLCE-206ENST00000482863 ABCC11Q96J66 1382 aa23.25■■□□□ 1.31
PCOLCE-206ENST00000482863 RAB3GAP2Q9H2M9 1393 aa23.25■■□□□ 1.31
PCOLCE-206ENST00000482863 TECPR2O15040 1411 aa23.25■■□□□ 1.31
PCOLCE-206ENST00000482863 CDC42BPGQ6DT37 1551 aa23.24■■□□□ 1.31
PCOLCE-206ENST00000482863 YTHDC2Q9H6S0 1430 aaKnown RBP23.23■■□□□ 1.31
PCOLCE-206ENST00000482863 C14orf93Q9H972 538 aaKnown RBP23.22■■□□□ 1.31
PCOLCE-206ENST00000482863 RGS12O14924 1447 aa23.22■■□□□ 1.31
PCOLCE-206ENST00000482863 PXDNQ92626 1479 aa23.21■■□□□ 1.31
PCOLCE-206ENST00000482863 NPHP3Q7Z494 1330 aa23.2■■□□□ 1.3
PCOLCE-206ENST00000482863 RBM6P78332 1123 aaKnown RBP23.2■■□□□ 1.3
PCOLCE-206ENST00000482863 SAFB2Q14151 953 aaKnown RBP eCLIP23.2■■□□□ 1.3
PCOLCE-206ENST00000482863 USP21Q9UK80 565 aa23.19■■□□□ 1.3
PCOLCE-206ENST00000482863 CDK12Q9NYV4 1490 aaPredicted RBP23.18■■□□□ 1.3
PCOLCE-206ENST00000482863 KNDC1Q76NI1 1749 aa23.16■■□□□ 1.3
PCOLCE-206ENST00000482863 MYOM2P54296 1465 aa23.16■■□□□ 1.3
PCOLCE-206ENST00000482863 NRXN1Q9ULB1 1477 aa23.16■■□□□ 1.3
PCOLCE-206ENST00000482863 FNBP4Q8N3X1 1017 aaPredicted RBP23.14■■□□□ 1.29
PCOLCE-206ENST00000482863 PRAM1Q96QH2 718 aa23.14■■□□□ 1.29
PCOLCE-206ENST00000482863 COL22A1Q8NFW1 1626 aaPredicted RBP23.14■■□□□ 1.29
PCOLCE-206ENST00000482863 PLEKHG5O94827 1062 aa23.13■■□□□ 1.29
PCOLCE-206ENST00000482863 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
PCOLCE-206ENST00000482863 FMN2Q9NZ56 1722 aa23.13■■□□□ 1.29
PCOLCE-206ENST00000482863 DHX57Q6P158 1386 aaKnown RBP23.13■■□□□ 1.29
PCOLCE-206ENST00000482863 KRT28Q7Z3Y7 464 aa23.12■■□□□ 1.29
PCOLCE-206ENST00000482863 SIRT1Q96EB6 747 aa23.12■■□□□ 1.29
PCOLCE-206ENST00000482863 TRPC5Q9UL62 973 aaPredicted RBP23.1■■□□□ 1.29
PCOLCE-206ENST00000482863 SPATA31A3Q5VYP0 1347 aa23.09■■□□□ 1.29
PCOLCE-206ENST00000482863 ATRNO75882 1429 aa23.09■■□□□ 1.29
PCOLCE-206ENST00000482863 PHF8Q9UPP1 1060 aa23.08■■□□□ 1.29
PCOLCE-206ENST00000482863 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.29
PCOLCE-206ENST00000482863 BCL9LQ86UU0 1499 aa23.08■■□□□ 1.29
PCOLCE-206ENST00000482863 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.28
PCOLCE-206ENST00000482863 CABLES1Q8TDN4 633 aa23.07■■□□□ 1.28
PCOLCE-206ENST00000482863 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
PCOLCE-206ENST00000482863 HIRIP3Q9BW71 556 aaPredicted RBP23.07■■□□□ 1.28
PCOLCE-206ENST00000482863 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
PCOLCE-206ENST00000482863 POGKQ9P215 609 aa23.06■■□□□ 1.28
PCOLCE-206ENST00000482863 RGPD8O14715 1765 aaPredicted RBP23.06■■□□□ 1.28
PCOLCE-206ENST00000482863 ADGRB1O14514 1584 aa23.03■■□□□ 1.28
PCOLCE-206ENST00000482863 KIF1AQ12756 1690 aa23.02■■□□□ 1.28
PCOLCE-206ENST00000482863 MINK1Q8N4C8 1332 aaPredicted RBP23.02■■□□□ 1.28
PCOLCE-206ENST00000482863 LMOD2Q6P5Q4 547 aa23.01■■□□□ 1.27
PCOLCE-206ENST00000482863 GJD4Q96KN9 370 aaPredicted RBP23■■□□□ 1.27
PCOLCE-206ENST00000482863 MARF1Q9Y4F3 1742 aaKnown RBP22.99■■□□□ 1.27
PCOLCE-206ENST00000482863 DLC1Q96QB1 1528 aa22.99■■□□□ 1.27
PCOLCE-206ENST00000482863 PSME1Q06323 249 aa22.99■■□□□ 1.27
PCOLCE-206ENST00000482863 USP32Q8NFA0 1604 aa22.99■■□□□ 1.27
PCOLCE-206ENST00000482863 PRR36Q9H6K5 1346 aa22.99■■□□□ 1.27
PCOLCE-206ENST00000482863 TNS3Q68CZ2 1445 aa22.99■■□□□ 1.27
PCOLCE-206ENST00000482863 UNC5CLQ8IV45 518 aa22.97■■□□□ 1.27
PCOLCE-206ENST00000482863 ATAD2Q6PL18 1390 aa22.97■■□□□ 1.27
PCOLCE-206ENST00000482863 SLIT2O94813 1529 aa22.97■■□□□ 1.27
PCOLCE-206ENST00000482863 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
PCOLCE-206ENST00000482863 SBNO1A3KN83 1393 aa22.94■■□□□ 1.26
PCOLCE-206ENST00000482863 RALGAPBQ86X10 1494 aa22.93■■□□□ 1.26
PCOLCE-206ENST00000482863 HRCP23327 699 aa22.93■■□□□ 1.26
PCOLCE-206ENST00000482863 GLI3P10071 1580 aa22.93■■□□□ 1.26
PCOLCE-206ENST00000482863 ANKARQ7Z5J8 1434 aa22.92■■□□□ 1.26
PCOLCE-206ENST00000482863 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
PCOLCE-206ENST00000482863 ADGRB2O60241 1585 aa22.92■■□□□ 1.26
PCOLCE-206ENST00000482863 FAM83GA6ND36 823 aa22.9■■□□□ 1.26
PCOLCE-206ENST00000482863 CCDC9Q9Y3X0 531 aaKnown RBP22.87■■□□□ 1.25
PCOLCE-206ENST00000482863 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.87■■□□□ 1.25
PCOLCE-206ENST00000482863 ARHGEF10O15013 1369 aa22.87■■□□□ 1.25
PCOLCE-206ENST00000482863 TULP4Q9NRJ4 1543 aa22.87■■□□□ 1.25
PCOLCE-206ENST00000482863 ABCA3Q99758 1704 aa22.86■■□□□ 1.25
PCOLCE-206ENST00000482863 VPS72Q15906 364 aa22.86■■□□□ 1.25
PCOLCE-206ENST00000482863 EP400Q96L91 3159 aa22.86■■□□□ 1.25
PCOLCE-206ENST00000482863 TRPM3Q9HCF6 1732 aaPredicted RBP22.85■■□□□ 1.25
PCOLCE-206ENST00000482863 SEPT12Q8IYM1 358 aa22.85■■□□□ 1.25
PCOLCE-206ENST00000482863 NGDNQ8NEJ9 315 aaKnown RBP22.85■■□□□ 1.25
PCOLCE-206ENST00000482863 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
PCOLCE-206ENST00000482863 NBPF1Q3BBV0 1214 aa22.84■■□□□ 1.25
PCOLCE-206ENST00000482863 PLCH1Q4KWH8 1693 aa22.84■■□□□ 1.25
PCOLCE-206ENST00000482863 NUDT16Q96DE0 195 aaKnown RBP22.83■■□□□ 1.25
PCOLCE-206ENST00000482863 STAC3Q96MF2 364 aa22.83■■□□□ 1.25
PCOLCE-206ENST00000482863 GPRASP1Q5JY77 1395 aa22.83■■□□□ 1.25
PCOLCE-206ENST00000482863 ARHGEF28Q8N1W1 1705 aaKnown RBP22.82■■□□□ 1.24
PCOLCE-206ENST00000482863 CDK19Q9BWU1 502 aa22.81■■□□□ 1.24
PCOLCE-206ENST00000482863 BTG4Q9NY30 223 aa22.81■■□□□ 1.24
PCOLCE-206ENST00000482863 ALS2Q96Q42 1657 aa22.8■■□□□ 1.24
PCOLCE-206ENST00000482863 EIF3AQ14152 1382 aaKnown RBP22.79■■□□□ 1.24
PCOLCE-206ENST00000482863 NUTM2GQ5VZR2 741 aa22.79■■□□□ 1.24
PCOLCE-206ENST00000482863 BRWD3Q6RI45 1802 aa22.79■■□□□ 1.24
PCOLCE-206ENST00000482863 ATP7BP35670 1465 aa22.79■■□□□ 1.24
PCOLCE-206ENST00000482863 DEFB132Q7Z7B7 95 aa22.78■■□□□ 1.24
PCOLCE-206ENST00000482863 ONECUT3O60422 494 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms