RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 STK26Q9P289 416 aa14.47□□□□□ -0.09
SPTLC1-206ENST00000482632 LAMC1P11047 1609 aa14.47□□□□□ -0.09
SPTLC1-206ENST00000482632 PIK3C2GO75747 1445 aa14.47□□□□□ -0.09
SPTLC1-206ENST00000482632 TMEM132EQ6IEE7 984 aa14.45□□□□□ -0.1
SPTLC1-206ENST00000482632 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1-206ENST00000482632 CFAP70Q5T0N1 1121 aa14.43□□□□□ -0.1
SPTLC1-206ENST00000482632 NALCNQ8IZF0 1738 aa14.43□□□□□ -0.1
SPTLC1-206ENST00000482632 ASXL1Q8IXJ9 1541 aa14.42□□□□□ -0.1
SPTLC1-206ENST00000482632 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
SPTLC1-206ENST00000482632 NRXN1Q9ULB1 1477 aa14.42□□□□□ -0.1
SPTLC1-206ENST00000482632 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
SPTLC1-206ENST00000482632 ATF3P18847 181 aa14.41□□□□□ -0.1
SPTLC1-206ENST00000482632 ROBO2Q9HCK4 1378 aa14.4□□□□□ -0.1
SPTLC1-206ENST00000482632 C14orf93Q9H972 538 aaKnown RBP14.4□□□□□ -0.1
SPTLC1-206ENST00000482632 PTCH1Q13635 1447 aa14.4□□□□□ -0.1
SPTLC1-206ENST00000482632 YTHDC2Q9H6S0 1430 aaKnown RBP14.4□□□□□ -0.1
SPTLC1-206ENST00000482632 NCOA3Q9Y6Q9 1424 aa14.39□□□□□ -0.11
SPTLC1-206ENST00000482632 ROBO1Q9Y6N7 1651 aa14.39□□□□□ -0.11
SPTLC1-206ENST00000482632 LRPPRCP42704 1394 aaKnown RBP14.38□□□□□ -0.11
SPTLC1-206ENST00000482632 L3MBTL2Q969R5 705 aa14.38□□□□□ -0.11
SPTLC1-206ENST00000482632 C19orf44Q9H6X5 657 aa14.38□□□□□ -0.11
SPTLC1-206ENST00000482632 ZBTB12Q9Y330 459 aaPredicted RBP14.38□□□□□ -0.11
SPTLC1-206ENST00000482632 TONSLQ96HA7 1378 aa14.37□□□□□ -0.11
SPTLC1-206ENST00000482632 SAFB2Q14151 953 aaKnown RBP eCLIP14.37□□□□□ -0.11
SPTLC1-206ENST00000482632 CADPS2Q86UW7 1296 aa14.37□□□□□ -0.11
SPTLC1-206ENST00000482632 STAC3Q96MF2 364 aa14.37□□□□□ -0.11
SPTLC1-206ENST00000482632 ADGRL3Q9HAR2 1447 aa14.37□□□□□ -0.11
SPTLC1-206ENST00000482632 WAPLQ7Z5K2 1190 aa14.36□□□□□ -0.11
SPTLC1-206ENST00000482632 TRAK1Q9UPV9 953 aa14.36□□□□□ -0.11
SPTLC1-206ENST00000482632 KIAA1210Q9ULL0 1709 aa14.35□□□□□ -0.11
SPTLC1-206ENST00000482632 POGKQ9P215 609 aa14.35□□□□□ -0.11
SPTLC1-206ENST00000482632 SLAIN2Q9P270 581 aa14.35□□□□□ -0.11
SPTLC1-206ENST00000482632 PRAG1Q86YV5 1406 aa14.34□□□□□ -0.11
SPTLC1-206ENST00000482632 RGS17Q9UGC6 210 aaPredicted RBP14.34□□□□□ -0.11
SPTLC1-206ENST00000482632 ABCC11Q96J66 1382 aa14.34□□□□□ -0.11
SPTLC1-206ENST00000482632 PLEKHH1Q9ULM0 1364 aa14.34□□□□□ -0.11
SPTLC1-206ENST00000482632 PHLPP1O60346 1717 aa14.33□□□□□ -0.12
SPTLC1-206ENST00000482632 CCER1Q8TC90 406 aaPredicted RBP14.33□□□□□ -0.12
SPTLC1-206ENST00000482632 ADGRB1O14514 1584 aa14.33□□□□□ -0.12
SPTLC1-206ENST00000482632 TECPR2O15040 1411 aa14.32□□□□□ -0.12
SPTLC1-206ENST00000482632 DCCP43146 1447 aa14.32□□□□□ -0.12
SPTLC1-206ENST00000482632 PRAM1Q96QH2 718 aa14.32□□□□□ -0.12
SPTLC1-206ENST00000482632 ARHGEF28Q8N1W1 1705 aaKnown RBP14.32□□□□□ -0.12
SPTLC1-206ENST00000482632 TRPM1Q7Z4N2 1603 aa14.31□□□□□ -0.12
SPTLC1-206ENST00000482632 NUTM2FA1L443 756 aa14.31□□□□□ -0.12
SPTLC1-206ENST00000482632 FAM135BQ49AJ0 1406 aa14.31□□□□□ -0.12
SPTLC1-206ENST00000482632 MST1RQ04912 1400 aa14.3□□□□□ -0.12
SPTLC1-206ENST00000482632 DLC1Q96QB1 1528 aa14.3□□□□□ -0.12
SPTLC1-206ENST00000482632 NBPF1Q3BBV0 1214 aa14.29□□□□□ -0.12
SPTLC1-206ENST00000482632 CDC42BPGQ6DT37 1551 aa14.29□□□□□ -0.12
SPTLC1-206ENST00000482632 RGPD8O14715 1765 aaPredicted RBP14.28□□□□□ -0.12
SPTLC1-206ENST00000482632 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
SPTLC1-206ENST00000482632 MINK1Q8N4C8 1332 aaPredicted RBP14.28□□□□□ -0.12
SPTLC1-206ENST00000482632 HIRIP3Q9BW71 556 aaPredicted RBP14.28□□□□□ -0.12
SPTLC1-206ENST00000482632 FMN2Q9NZ56 1722 aa14.28□□□□□ -0.12
SPTLC1-206ENST00000482632 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
SPTLC1-206ENST00000482632 C1orf167Q5SNV9 1468 aa14.26□□□□□ -0.13
SPTLC1-206ENST00000482632 BRINP3Q76B58 766 aa14.26□□□□□ -0.13
SPTLC1-206ENST00000482632 SIRT1Q96EB6 747 aa14.25□□□□□ -0.13
SPTLC1-206ENST00000482632 QRICH2Q9H0J4 1663 aa14.24□□□□□ -0.13
SPTLC1-206ENST00000482632 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
SPTLC1-206ENST00000482632 ESCO1Q5FWF5 840 aa14.24□□□□□ -0.13
SPTLC1-206ENST00000482632 NHSL1Q5SYE7 1610 aa14.23□□□□□ -0.13
SPTLC1-206ENST00000482632 DDX17Q92841 729 aaKnown RBP14.23□□□□□ -0.13
SPTLC1-206ENST00000482632 ORAI2Q96SN7 254 aa14.23□□□□□ -0.13
SPTLC1-206ENST00000482632 AHDC1Q5TGY3 1603 aaPredicted RBP14.23□□□□□ -0.13
SPTLC1-206ENST00000482632 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
SPTLC1-206ENST00000482632 POTEAQ6S8J7 498 aa14.22□□□□□ -0.13
SPTLC1-206ENST00000482632 COL16A1Q07092 1604 aaPredicted RBP14.22□□□□□ -0.13
SPTLC1-206ENST00000482632 ADGRB2O60241 1585 aa14.22□□□□□ -0.13
SPTLC1-206ENST00000482632 CENPJQ9HC77 1338 aaPredicted RBP14.2□□□□□ -0.14
SPTLC1-206ENST00000482632 CARD11Q9BXL7 1154 aa14.2□□□□□ -0.14
SPTLC1-206ENST00000482632 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
SPTLC1-206ENST00000482632 RALGAPBQ86X10 1494 aa14.19□□□□□ -0.14
SPTLC1-206ENST00000482632 ITSN1Q15811 1721 aa14.19□□□□□ -0.14
SPTLC1-206ENST00000482632 EIF3AQ14152 1382 aaKnown RBP14.19□□□□□ -0.14
SPTLC1-206ENST00000482632 SRCAPQ6ZRS2 3230 aa14.19□□□□□ -0.14
SPTLC1-206ENST00000482632 XPCQ01831 940 aaPredicted RBP14.18□□□□□ -0.14
SPTLC1-206ENST00000482632 USP32Q8NFA0 1604 aa14.17□□□□□ -0.14
SPTLC1-206ENST00000482632 WASLO00401 505 aaPredicted RBP14.17□□□□□ -0.14
SPTLC1-206ENST00000482632 JCADQ9P266 1359 aa14.17□□□□□ -0.14
SPTLC1-206ENST00000482632 TULP4Q9NRJ4 1543 aa14.16□□□□□ -0.14
SPTLC1-206ENST00000482632 FOXO3O43524 673 aa14.16□□□□□ -0.14
SPTLC1-206ENST00000482632 SRPK2P78362 688 aaKnown RBP14.16□□□□□ -0.14
SPTLC1-206ENST00000482632 PMFBP1Q8TBY8 1022 aa14.16□□□□□ -0.14
SPTLC1-206ENST00000482632 PHF8Q9UPP1 1060 aa14.16□□□□□ -0.14
SPTLC1-206ENST00000482632 SHPRHQ149N8 1683 aa14.16□□□□□ -0.14
SPTLC1-206ENST00000482632 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.14
SPTLC1-206ENST00000482632 NUTM2BA6NNL0 878 aaPredicted RBP14.15□□□□□ -0.14
SPTLC1-206ENST00000482632 NUTM2EB1AL46 878 aaPredicted RBP14.15□□□□□ -0.14
SPTLC1-206ENST00000482632 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
SPTLC1-206ENST00000482632 NUTM2AQ8IVF1 878 aaPredicted RBP14.15□□□□□ -0.14
SPTLC1-206ENST00000482632 CDK19Q9BWU1 502 aa14.15□□□□□ -0.14
SPTLC1-206ENST00000482632 ANKARQ7Z5J8 1434 aa14.15□□□□□ -0.14
SPTLC1-206ENST00000482632 LRRC59Q96AG4 307 aaKnown RBP14.14□□□□□ -0.15
SPTLC1-206ENST00000482632 GPRASP1Q5JY77 1395 aa14.13□□□□□ -0.15
SPTLC1-206ENST00000482632 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
SPTLC1-206ENST00000482632 MEX3CQ5U5Q3 659 aaKnown RBP14.13□□□□□ -0.15
SPTLC1-206ENST00000482632 PSME1Q06323 249 aa14.12□□□□□ -0.15
SPTLC1-206ENST00000482632 LMOD2Q6P5Q4 547 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms