RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, human

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH3-208	ENST00000482460	DDX17	Q92841	729 aa	Known RBP	33.28	■■■□□ 2.92
CYTH3-208	ENST00000482460	SIRT1	Q96EB6	747 aa		33.28	■■■□□ 2.92
CYTH3-208	ENST00000482460	ORAI2	Q96SN7	254 aa		33.28	■■■□□ 2.92
CYTH3-208	ENST00000482460	CDC42BPG	Q6DT37	1551 aa		33.27	■■■□□ 2.92
CYTH3-208	ENST00000482460	DHX57	Q6P158	1386 aa	Known RBP	33.27	■■■□□ 2.92
CYTH3-208	ENST00000482460	STAC3	Q96MF2	364 aa		33.25	■■■□□ 2.91
CYTH3-208	ENST00000482460	PLEKHH1	Q9ULM0	1364 aa		33.24	■■■□□ 2.91
CYTH3-208	ENST00000482460	DCAF11	Q8TEB1	546 aa		33.24	■■■□□ 2.91
CYTH3-208	ENST00000482460	LRP6	O75581	1613 aa		33.24	■■■□□ 2.91
CYTH3-208	ENST00000482460	POTEA	Q6S8J7	498 aa		33.22	■■■□□ 2.91
CYTH3-208	ENST00000482460	KDM2A	Q9Y2K7	1162 aa		33.22	■■■□□ 2.91
CYTH3-208	ENST00000482460	MEX3C	Q5U5Q3	659 aa	Known RBP	33.2	■■■□□ 2.91
CYTH3-208	ENST00000482460	ESCO1	Q5FWF5	840 aa		33.18	■■■□□ 2.9
CYTH3-208	ENST00000482460	SOS2	Q07890	1332 aa	Predicted RBP	33.18	■■■□□ 2.9
CYTH3-208	ENST00000482460	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.17	■■■□□ 2.9
CYTH3-208	ENST00000482460	NUTM2E	B1AL46	878 aa	Predicted RBP	33.17	■■■□□ 2.9
CYTH3-208	ENST00000482460	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.17	■■■□□ 2.9
CYTH3-208	ENST00000482460	PNPLA6	Q8IY17	1366 aa		33.15	■■■□□ 2.9
CYTH3-208	ENST00000482460	NUTM2F	A1L443	756 aa		33.13	■■■□□ 2.89
CYTH3-208	ENST00000482460	ADGRB1	O14514	1584 aa		33.13	■■■□□ 2.89
CYTH3-208	ENST00000482460	PRAM1	Q96QH2	718 aa		33.12	■■■□□ 2.89
CYTH3-208	ENST00000482460	DLC1	Q96QB1	1528 aa		33.12	■■■□□ 2.89
CYTH3-208	ENST00000482460	NPHP3	Q7Z494	1330 aa		33.11	■■■□□ 2.89
CYTH3-208	ENST00000482460	FMN2	Q9NZ56	1722 aa		33.11	■■■□□ 2.89
CYTH3-208	ENST00000482460	ZNF772	Q68DY9	489 aa	Predicted RBP	33.08	■■■□□ 2.89
CYTH3-208	ENST00000482460	POGK	Q9P215	609 aa		33.08	■■■□□ 2.89
CYTH3-208	ENST00000482460	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.07	■■■□□ 2.88
CYTH3-208	ENST00000482460	TRAK1	Q9UPV9	953 aa		33.07	■■■□□ 2.88
CYTH3-208	ENST00000482460	FOXO3	O43524	673 aa		33.06	■■■□□ 2.88
CYTH3-208	ENST00000482460	PXDN	Q92626	1479 aa		33.02	■■■□□ 2.88
CYTH3-208	ENST00000482460	AFF2	P51816	1311 aa		32.99	■■■□□ 2.87
CYTH3-208	ENST00000482460	RGPD8	O14715	1765 aa	Predicted RBP	32.98	■■■□□ 2.87
CYTH3-208	ENST00000482460	KIF1A	Q12756	1690 aa		32.98	■■■□□ 2.87
CYTH3-208	ENST00000482460	XPC	Q01831	940 aa	Predicted RBP	32.98	■■■□□ 2.87
CYTH3-208	ENST00000482460	C8orf37	Q96NL8	207 aa		32.96	■■■□□ 2.87
CYTH3-208	ENST00000482460	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.95	■■■□□ 2.87
CYTH3-208	ENST00000482460	PHF8	Q9UPP1	1060 aa		32.95	■■■□□ 2.87
CYTH3-208	ENST00000482460	ADGRB2	O60241	1585 aa		32.95	■■■□□ 2.86
CYTH3-208	ENST00000482460	ADAMTS2	O95450	1211 aa		32.94	■■■□□ 2.86
CYTH3-208	ENST00000482460	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.92	■■■□□ 2.86
CYTH3-208	ENST00000482460	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.92	■■■□□ 2.86
CYTH3-208	ENST00000482460	KRT28	Q7Z3Y7	464 aa		32.91	■■■□□ 2.86
CYTH3-208	ENST00000482460	ANKAR	Q7Z5J8	1434 aa		32.91	■■■□□ 2.86
CYTH3-208	ENST00000482460	KIAA1210	Q9ULL0	1709 aa		32.91	■■■□□ 2.86
CYTH3-208	ENST00000482460	NGLY1	Q96IV0	654 aa		32.9	■■■□□ 2.86
CYTH3-208	ENST00000482460	RXRB	P28702	533 aa		32.89	■■■□□ 2.86
CYTH3-208	ENST00000482460	SPATA31A3	Q5VYP0	1347 aa		32.88	■■■□□ 2.85
CYTH3-208	ENST00000482460	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.88	■■■□□ 2.85
CYTH3-208	ENST00000482460	USP32	Q8NFA0	1604 aa		32.87	■■■□□ 2.85
CYTH3-208	ENST00000482460	WASL	O00401	505 aa	Predicted RBP	32.86	■■■□□ 2.85
CYTH3-208	ENST00000482460	PSME1	Q06323	249 aa		32.86	■■■□□ 2.85
CYTH3-208	ENST00000482460	EIF3A	Q14152	1382 aa	Known RBP	32.85	■■■□□ 2.85
CYTH3-208	ENST00000482460	SIN3A	Q96ST3	1273 aa		32.84	■■■□□ 2.85
CYTH3-208	ENST00000482460	QTRT2	Q9H974	415 aa	Known RBP	32.84	■■■□□ 2.85
CYTH3-208	ENST00000482460	NBPF1	Q3BBV0	1214 aa		32.82	■■■□□ 2.84
CYTH3-208	ENST00000482460	PMFBP1	Q8TBY8	1022 aa		32.82	■■■□□ 2.84
CYTH3-208	ENST00000482460	L3MBTL2	Q969R5	705 aa		32.82	■■■□□ 2.84
CYTH3-208	ENST00000482460	TULP4	Q9NRJ4	1543 aa		32.81	■■■□□ 2.84
CYTH3-208	ENST00000482460	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.8	■■■□□ 2.84
CYTH3-208	ENST00000482460	PRR36	Q9H6K5	1346 aa		32.79	■■■□□ 2.84
CYTH3-208	ENST00000482460	USP21	Q9UK80	565 aa		32.78	■■■□□ 2.84
CYTH3-208	ENST00000482460	SBNO1	A3KN83	1393 aa		32.78	■■■□□ 2.84
CYTH3-208	ENST00000482460	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.78	■■■□□ 2.84
CYTH3-208	ENST00000482460	TNS3	Q68CZ2	1445 aa		32.77	■■■□□ 2.84
CYTH3-208	ENST00000482460	RBM6	P78332	1123 aa	Known RBP	32.77	■■■□□ 2.84
CYTH3-208	ENST00000482460	NEUROD1	Q13562	356 aa		32.77	■■■□□ 2.84
CYTH3-208	ENST00000482460	MARF1	Q9Y4F3	1742 aa	Known RBP	32.77	■■■□□ 2.84
CYTH3-208	ENST00000482460	TRIM26	Q12899	539 aa	Predicted RBP	32.71	■■■□□ 2.83
CYTH3-208	ENST00000482460	TRPC5	Q9UL62	973 aa	Predicted RBP	32.71	■■■□□ 2.83
CYTH3-208	ENST00000482460	ARHGEF10	O15013	1369 aa		32.7	■■■□□ 2.83
CYTH3-208	ENST00000482460	GPRASP1	Q5JY77	1395 aa		32.7	■■■□□ 2.83
CYTH3-208	ENST00000482460	LMOD2	Q6P5Q4	547 aa		32.7	■■■□□ 2.83
CYTH3-208	ENST00000482460	NUDT16	Q96DE0	195 aa	Known RBP	32.7	■■■□□ 2.83
CYTH3-208	ENST00000482460	CDK19	Q9BWU1	502 aa		32.7	■■■□□ 2.83
CYTH3-208	ENST00000482460	NGDN	Q8NEJ9	315 aa	Known RBP	32.68	■■■□□ 2.82
CYTH3-208	ENST00000482460	ATP7B	P35670	1465 aa		32.67	■■■□□ 2.82
CYTH3-208	ENST00000482460	ITSN1	Q15811	1721 aa		32.67	■■■□□ 2.82
CYTH3-208	ENST00000482460	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.66	■■■□□ 2.82
CYTH3-208	ENST00000482460	HAP1	P54257	671 aa	Predicted RBP	32.66	■■■□□ 2.82
CYTH3-208	ENST00000482460	CABLES1	Q8TDN4	633 aa		32.66	■■■□□ 2.82
CYTH3-208	ENST00000482460	ATRN	O75882	1429 aa		32.66	■■■□□ 2.82
CYTH3-208	ENST00000482460	BCL9L	Q86UU0	1499 aa		32.66	■■■□□ 2.82
CYTH3-208	ENST00000482460	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.65	■■■□□ 2.82
CYTH3-208	ENST00000482460	RGS12	O14924	1447 aa		32.63	■■■□□ 2.81
CYTH3-208	ENST00000482460	TRPM1	Q7Z4N2	1603 aa		32.62	■■■□□ 2.81
CYTH3-208	ENST00000482460	PLEKHG5	O94827	1062 aa		32.61	■■■□□ 2.81
CYTH3-208	ENST00000482460	ALS2	Q96Q42	1657 aa		32.6	■■■□□ 2.81
CYTH3-208	ENST00000482460	CCDC61	Q9Y6R9	512 aa		32.6	■■■□□ 2.81
CYTH3-208	ENST00000482460	SLIT2	O94813	1529 aa		32.6	■■■□□ 2.81
CYTH3-208	ENST00000482460	ABCA3	Q99758	1704 aa		32.58	■■■□□ 2.81
CYTH3-208	ENST00000482460	UNC5CL	Q8IV45	518 aa		32.58	■■■□□ 2.81
CYTH3-208	ENST00000482460	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.58	■■■□□ 2.81
CYTH3-208	ENST00000482460	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.57	■■■□□ 2.81
CYTH3-208	ENST00000482460	PAK3	O75914	559 aa	Predicted RBP	32.56	■■■□□ 2.8
CYTH3-208	ENST00000482460	TOPAZ1	Q8N9V7	1692 aa		32.56	■■■□□ 2.8
CYTH3-208	ENST00000482460	PLEKHG3	A1L390	1219 aa		32.55	■■■□□ 2.8
CYTH3-208	ENST00000482460	QRICH2	Q9H0J4	1663 aa		32.55	■■■□□ 2.8
CYTH3-208	ENST00000482460	ROCK2	O75116	1388 aa	Known RBP	32.55	■■■□□ 2.8
CYTH3-208	ENST00000482460	SRPK2	P78362	688 aa	Known RBP	32.54	■■■□□ 2.8
CYTH3-208	ENST00000482460	GJD4	Q96KN9	370 aa	Predicted RBP	32.54	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms