RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 TMEM132EQ6IEE7 984 aa28.74■■■□□ 2.19
CHPF2-203ENST00000482173 WAPLQ7Z5K2 1190 aa28.74■■■□□ 2.19
CHPF2-203ENST00000482173 ESCO1Q5FWF5 840 aa28.73■■■□□ 2.19
CHPF2-203ENST00000482173 IFT172Q9UG01 1749 aa28.73■■■□□ 2.19
CHPF2-203ENST00000482173 LRPPRCP42704 1394 aaKnown RBP28.73■■■□□ 2.19
CHPF2-203ENST00000482173 NGLY1Q96IV0 654 aa28.72■■■□□ 2.19
CHPF2-203ENST00000482173 QTRT2Q9H974 415 aaKnown RBP28.72■■■□□ 2.19
CHPF2-203ENST00000482173 TECPR2O15040 1411 aa28.7■■■□□ 2.19
CHPF2-203ENST00000482173 UPF1Q92900 1129 aaKnown RBP eCLIP28.7■■■□□ 2.18
CHPF2-203ENST00000482173 ABCC11Q96J66 1382 aa28.7■■■□□ 2.18
CHPF2-203ENST00000482173 CDC42BPGQ6DT37 1551 aa28.7■■■□□ 2.18
CHPF2-203ENST00000482173 CDK12Q9NYV4 1490 aaPredicted RBP28.69■■■□□ 2.18
CHPF2-203ENST00000482173 PIK3C2GO75747 1445 aa28.68■■■□□ 2.18
CHPF2-203ENST00000482173 NPHP3Q7Z494 1330 aa28.68■■■□□ 2.18
CHPF2-203ENST00000482173 NUTM2FA1L443 756 aa28.67■■■□□ 2.18
CHPF2-203ENST00000482173 RBM6P78332 1123 aaKnown RBP28.66■■■□□ 2.18
CHPF2-203ENST00000482173 PLEKHH1Q9ULM0 1364 aa28.65■■■□□ 2.18
CHPF2-203ENST00000482173 FOXO3O43524 673 aa28.65■■■□□ 2.18
CHPF2-203ENST00000482173 YTHDC2Q9H6S0 1430 aaKnown RBP28.63■■■□□ 2.17
CHPF2-203ENST00000482173 C14orf93Q9H972 538 aaKnown RBP28.63■■■□□ 2.17
CHPF2-203ENST00000482173 XPCQ01831 940 aaPredicted RBP28.62■■■□□ 2.17
CHPF2-203ENST00000482173 KNDC1Q76NI1 1749 aa28.62■■■□□ 2.17
CHPF2-203ENST00000482173 USP21Q9UK80 565 aa28.61■■■□□ 2.17
CHPF2-203ENST00000482173 RAB3GAP2Q9H2M9 1393 aa28.6■■■□□ 2.17
CHPF2-203ENST00000482173 CFAP70Q5T0N1 1121 aa28.59■■■□□ 2.17
CHPF2-203ENST00000482173 SIRT1Q96EB6 747 aa28.59■■■□□ 2.17
CHPF2-203ENST00000482173 PXDNQ92626 1479 aa28.59■■■□□ 2.17
CHPF2-203ENST00000482173 COL22A1Q8NFW1 1626 aaPredicted RBP28.58■■■□□ 2.17
CHPF2-203ENST00000482173 FNBP4Q8N3X1 1017 aaPredicted RBP28.57■■■□□ 2.16
CHPF2-203ENST00000482173 DHX57Q6P158 1386 aaKnown RBP28.57■■■□□ 2.16
CHPF2-203ENST00000482173 RGS12O14924 1447 aa28.57■■■□□ 2.16
CHPF2-203ENST00000482173 NRXN1Q9ULB1 1477 aa28.55■■■□□ 2.16
CHPF2-203ENST00000482173 TRPC5Q9UL62 973 aaPredicted RBP28.55■■■□□ 2.16
CHPF2-203ENST00000482173 FMN2Q9NZ56 1722 aa28.54■■■□□ 2.16
CHPF2-203ENST00000482173 MYOM2P54296 1465 aa28.53■■■□□ 2.16
CHPF2-203ENST00000482173 SAFB2Q14151 953 aaKnown RBP eCLIP28.49■■■□□ 2.15
CHPF2-203ENST00000482173 KRT28Q7Z3Y7 464 aa28.49■■■□□ 2.15
CHPF2-203ENST00000482173 PRAM1Q96QH2 718 aa28.49■■■□□ 2.15
CHPF2-203ENST00000482173 SPATA31A3Q5VYP0 1347 aa28.47■■■□□ 2.15
CHPF2-203ENST00000482173 ATRNO75882 1429 aa28.46■■■□□ 2.15
CHPF2-203ENST00000482173 KIF1AQ12756 1690 aa28.46■■■□□ 2.15
CHPF2-203ENST00000482173 POGKQ9P215 609 aa28.46■■■□□ 2.15
CHPF2-203ENST00000482173 PHF8Q9UPP1 1060 aa28.46■■■□□ 2.15
CHPF2-203ENST00000482173 RGPD8O14715 1765 aaPredicted RBP28.45■■■□□ 2.14
CHPF2-203ENST00000482173 MARF1Q9Y4F3 1742 aaKnown RBP28.44■■■□□ 2.14
CHPF2-203ENST00000482173 BCL9LQ86UU0 1499 aa28.43■■■□□ 2.14
CHPF2-203ENST00000482173 KDM2AQ9Y2K7 1162 aa28.43■■■□□ 2.14
CHPF2-203ENST00000482173 PSME1Q06323 249 aa28.41■■■□□ 2.14
CHPF2-203ENST00000482173 DCAF11Q8TEB1 546 aa28.4■■■□□ 2.14
CHPF2-203ENST00000482173 ATAD2Q6PL18 1390 aa28.39■■■□□ 2.14
CHPF2-203ENST00000482173 DLC1Q96QB1 1528 aa28.39■■■□□ 2.14
CHPF2-203ENST00000482173 TRAK1Q9UPV9 953 aa28.39■■■□□ 2.14
CHPF2-203ENST00000482173 GJD4Q96KN9 370 aaPredicted RBP28.37■■■□□ 2.13
CHPF2-203ENST00000482173 HRCP23327 699 aa28.36■■■□□ 2.13
CHPF2-203ENST00000482173 HAP1P54257 671 aaPredicted RBP28.36■■■□□ 2.13
CHPF2-203ENST00000482173 ADGRB1O14514 1584 aa28.36■■■□□ 2.13
CHPF2-203ENST00000482173 TNS3Q68CZ2 1445 aa28.35■■■□□ 2.13
CHPF2-203ENST00000482173 PLEKHG5O94827 1062 aa28.35■■■□□ 2.13
CHPF2-203ENST00000482173 LMOD2Q6P5Q4 547 aa28.35■■■□□ 2.13
CHPF2-203ENST00000482173 UNC5CLQ8IV45 518 aa28.35■■■□□ 2.13
CHPF2-203ENST00000482173 PMFBP1Q8TBY8 1022 aa28.35■■■□□ 2.13
CHPF2-203ENST00000482173 CABLES1Q8TDN4 633 aa28.34■■■□□ 2.13
CHPF2-203ENST00000482173 HIRIP3Q9BW71 556 aaPredicted RBP28.34■■■□□ 2.13
CHPF2-203ENST00000482173 STAC3Q96MF2 364 aa28.33■■■□□ 2.13
CHPF2-203ENST00000482173 SBNO1A3KN83 1393 aa28.33■■■□□ 2.13
CHPF2-203ENST00000482173 MINK1Q8N4C8 1332 aaPredicted RBP28.32■■■□□ 2.12
CHPF2-203ENST00000482173 ANKARQ7Z5J8 1434 aa28.32■■■□□ 2.12
CHPF2-203ENST00000482173 SLIT2O94813 1529 aa28.31■■■□□ 2.12
CHPF2-203ENST00000482173 USP32Q8NFA0 1604 aa28.3■■■□□ 2.12
CHPF2-203ENST00000482173 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.29■■■□□ 2.12
CHPF2-203ENST00000482173 ADGRB2O60241 1585 aa28.29■■■□□ 2.12
CHPF2-203ENST00000482173 ARHGEF10O15013 1369 aa28.28■■■□□ 2.12
CHPF2-203ENST00000482173 RALGAPBQ86X10 1494 aa28.26■■■□□ 2.11
CHPF2-203ENST00000482173 WASLO00401 505 aaPredicted RBP28.25■■■□□ 2.11
CHPF2-203ENST00000482173 EIF3AQ14152 1382 aaKnown RBP28.24■■■□□ 2.11
CHPF2-203ENST00000482173 PRR36Q9H6K5 1346 aa28.24■■■□□ 2.11
CHPF2-203ENST00000482173 GLI3P10071 1580 aa28.23■■■□□ 2.11
CHPF2-203ENST00000482173 GPRASP1Q5JY77 1395 aa28.23■■■□□ 2.11
CHPF2-203ENST00000482173 VPS72Q15906 364 aa28.21■■■□□ 2.11
CHPF2-203ENST00000482173 CCDC125Q86Z20 511 aa28.21■■■□□ 2.11
CHPF2-203ENST00000482173 TULP4Q9NRJ4 1543 aa28.2■■■□□ 2.1
CHPF2-203ENST00000482173 CCDC9Q9Y3X0 531 aaKnown RBP28.2■■■□□ 2.1
CHPF2-203ENST00000482173 ABCA3Q99758 1704 aa28.19■■■□□ 2.1
CHPF2-203ENST00000482173 FAM83GA6ND36 823 aa28.19■■■□□ 2.1
CHPF2-203ENST00000482173 NGDNQ8NEJ9 315 aaKnown RBP28.19■■■□□ 2.1
CHPF2-203ENST00000482173 PLCH1Q4KWH8 1693 aa28.17■■■□□ 2.1
CHPF2-203ENST00000482173 TRPM3Q9HCF6 1732 aaPredicted RBP28.17■■■□□ 2.1
CHPF2-203ENST00000482173 NWD2Q9ULI1 1742 aa28.16■■■□□ 2.1
CHPF2-203ENST00000482173 SEPT12Q8IYM1 358 aa28.16■■■□□ 2.1
CHPF2-203ENST00000482173 ARHGEF28Q8N1W1 1705 aaKnown RBP28.14■■■□□ 2.1
CHPF2-203ENST00000482173 PAK3O75914 559 aaPredicted RBP28.13■■■□□ 2.09
CHPF2-203ENST00000482173 NUDT16Q96DE0 195 aaKnown RBP28.13■■■□□ 2.09
CHPF2-203ENST00000482173 ALS2Q96Q42 1657 aa28.13■■■□□ 2.09
CHPF2-203ENST00000482173 EP400Q96L91 3159 aa28.12■■■□□ 2.09
CHPF2-203ENST00000482173 BRWD3Q6RI45 1802 aa28.11■■■□□ 2.09
CHPF2-203ENST00000482173 ONECUT3O60422 494 aaPredicted RBP28.11■■■□□ 2.09
CHPF2-203ENST00000482173 BTG4Q9NY30 223 aa28.11■■■□□ 2.09
CHPF2-203ENST00000482173 ZRANB1Q9UGI0 708 aa28.11■■■□□ 2.09
CHPF2-203ENST00000482173 CDK19Q9BWU1 502 aa28.1■■■□□ 2.09
CHPF2-203ENST00000482173 BLMP54132 1417 aaPredicted RBP28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms