RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 IL21Q9HBE4 155 aa10.95□□□□□ -0.66
CTNNB1-213ENST00000482042 RGS20O76081 388 aa10.94□□□□□ -0.66
CTNNB1-213ENST00000482042 MAP2K5Q13163 448 aa10.94□□□□□ -0.66
CTNNB1-213ENST00000482042 GOLGA3Q08378 1498 aa10.93□□□□□ -0.66
CTNNB1-213ENST00000482042 RIMBP3CA6NJZ7 1639 aa10.93□□□□□ -0.66
CTNNB1-213ENST00000482042 RIMBP3BA6NNM3 1639 aa10.93□□□□□ -0.66
CTNNB1-213ENST00000482042 RIMBP3Q9UFD9 1639 aa10.93□□□□□ -0.66
CTNNB1-213ENST00000482042 SLC10A3P09131 477 aa10.92□□□□□ -0.66
CTNNB1-213ENST00000482042 LMOD2Q6P5Q4 547 aa10.91□□□□□ -0.66
CTNNB1-213ENST00000482042 FAM9AQ8IZU1 332 aaPredicted RBP10.91□□□□□ -0.66
CTNNB1-213ENST00000482042 PHOX2BQ99453 314 aa10.91□□□□□ -0.66
CTNNB1-213ENST00000482042 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
CTNNB1-213ENST00000482042 CFHP08603 1231 aa10.9□□□□□ -0.66
CTNNB1-213ENST00000482042 KMT5BQ4FZB7 885 aa10.9□□□□□ -0.66
CTNNB1-213ENST00000482042 ACTN4O43707 911 aaKnown RBP10.9□□□□□ -0.67
CTNNB1-213ENST00000482042 ARHGEF11O15085 1522 aa10.89□□□□□ -0.67
CTNNB1-213ENST00000482042 ZNF516Q92618 1163 aa10.89□□□□□ -0.67
CTNNB1-213ENST00000482042 PCDHB3Q9Y5E6 796 aa10.89□□□□□ -0.67
CTNNB1-213ENST00000482042 MINK1Q8N4C8 1332 aaPredicted RBP10.89□□□□□ -0.67
CTNNB1-213ENST00000482042 UGGT2Q9NYU1 1516 aa10.88□□□□□ -0.67
CTNNB1-213ENST00000482042 IRF6O14896 467 aa10.88□□□□□ -0.67
CTNNB1-213ENST00000482042 COPS2P61201 443 aa10.88□□□□□ -0.67
CTNNB1-213ENST00000482042 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
CTNNB1-213ENST00000482042 CARMIL2Q6F5E8 1435 aa10.87□□□□□ -0.67
CTNNB1-213ENST00000482042 RSPH4AQ5TD94 716 aa10.86□□□□□ -0.67
CTNNB1-213ENST00000482042 KIAA0556O60303 1618 aa10.86□□□□□ -0.67
CTNNB1-213ENST00000482042 EFCAB5A4FU69 1503 aa10.85□□□□□ -0.67
CTNNB1-213ENST00000482042 ZPR1O75312 459 aa10.85□□□□□ -0.67
CTNNB1-213ENST00000482042 BLOC1S3Q6QNY0 202 aa10.85□□□□□ -0.67
CTNNB1-213ENST00000482042 SAMD9Q5K651 1589 aa10.85□□□□□ -0.67
CTNNB1-213ENST00000482042 SULF1Q8IWU6 871 aa10.84□□□□□ -0.67
CTNNB1-213ENST00000482042 CCDC102AQ96A19 550 aa10.84□□□□□ -0.67
CTNNB1-213ENST00000482042 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
CTNNB1-213ENST00000482042 DDX11L8A8MPP1 907 aa10.82□□□□□ -0.68
CTNNB1-213ENST00000482042 UBTFP17480 764 aaKnown RBP10.82□□□□□ -0.68
CTNNB1-213ENST00000482042 RDH13Q8NBN7 331 aa10.81□□□□□ -0.68
CTNNB1-213ENST00000482042 NKX2-3Q8TAU0 364 aa10.81□□□□□ -0.68
CTNNB1-213ENST00000482042 ERCC6L2Q5T890 1561 aa10.8□□□□□ -0.68
CTNNB1-213ENST00000482042 ZMYND10O75800 440 aa10.79□□□□□ -0.68
CTNNB1-213ENST00000482042 PPP1R18Q6NYC8 613 aa10.79□□□□□ -0.68
CTNNB1-213ENST00000482042 BARGINQ6ZT62 677 aa10.79□□□□□ -0.68
CTNNB1-213ENST00000482042 ZC3H15Q8WU90 426 aaKnown RBP10.79□□□□□ -0.68
CTNNB1-213ENST00000482042 DISP1Q96F81 1524 aa10.79□□□□□ -0.68
CTNNB1-213ENST00000482042 TNIKQ9UKE5 1360 aa10.78□□□□□ -0.68
CTNNB1-213ENST00000482042 ARAP1Q96P48 1450 aa10.78□□□□□ -0.68
CTNNB1-213ENST00000482042 NR1I2O75469 434 aa10.77□□□□□ -0.68
CTNNB1-213ENST00000482042 GCGRP47871 477 aa10.77□□□□□ -0.68
CTNNB1-213ENST00000482042 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.77□□□□□ -0.68
CTNNB1-213ENST00000482042 TLL1O43897 1013 aa10.77□□□□□ -0.69
CTNNB1-213ENST00000482042 MDM2Q00987 491 aaPredicted RBP10.77□□□□□ -0.69
CTNNB1-213ENST00000482042 CD46P15529 392 aa10.76□□□□□ -0.69
CTNNB1-213ENST00000482042 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
CTNNB1-213ENST00000482042 GGCXP38435 758 aa10.75□□□□□ -0.69
CTNNB1-213ENST00000482042 FUT2Q10981 343 aa10.75□□□□□ -0.69
CTNNB1-213ENST00000482042 TMUB1Q9BVT8 246 aa10.75□□□□□ -0.69
CTNNB1-213ENST00000482042 PUS10Q3MIT2 529 aaKnown RBP10.74□□□□□ -0.69
CTNNB1-213ENST00000482042 MORN1Q5T089 497 aa10.74□□□□□ -0.69
CTNNB1-213ENST00000482042 RAPGEF6Q8TEU7 1601 aa10.73□□□□□ -0.69
CTNNB1-213ENST00000482042 ADH1BP00325 375 aa10.73□□□□□ -0.69
CTNNB1-213ENST00000482042 CLCN1P35523 988 aa10.73□□□□□ -0.69
CTNNB1-213ENST00000482042 ATP6V1AP38606 617 aa10.73□□□□□ -0.69
CTNNB1-213ENST00000482042 SCUBE3Q8IX30 993 aa10.73□□□□□ -0.69
CTNNB1-213ENST00000482042 GPCPD1Q9NPB8 672 aa10.73□□□□□ -0.69
CTNNB1-213ENST00000482042 PTPRGP23470 1445 aa10.73□□□□□ -0.69
CTNNB1-213ENST00000482042 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
CTNNB1-213ENST00000482042 ADCY10Q96PN6 1610 aa10.72□□□□□ -0.69
CTNNB1-213ENST00000482042 ABCC2Q92887 1545 aa10.71□□□□□ -0.7
CTNNB1-213ENST00000482042 ABCA8O94911 1581 aa10.7□□□□□ -0.7
CTNNB1-213ENST00000482042 FMN1Q68DA7 1419 aa10.7□□□□□ -0.7
CTNNB1-213ENST00000482042 FAM217BQ9NTX9 383 aaPredicted RBP10.7□□□□□ -0.7
CTNNB1-213ENST00000482042 UHRF1BP1LA0JNW5 1464 aa10.7□□□□□ -0.7
CTNNB1-213ENST00000482042 ARHGAP35Q9NRY4 1499 aa10.7□□□□□ -0.7
CTNNB1-213ENST00000482042 HECW1Q76N89 1606 aa10.7□□□□□ -0.7
CTNNB1-213ENST00000482042 CYB5RLQ6IPT4 315 aa10.69□□□□□ -0.7
CTNNB1-213ENST00000482042 V9GY48 417 aaPredicted RBP10.69□□□□□ -0.7
CTNNB1-213ENST00000482042 ZCCHC11Q5TAX3 1644 aaKnown RBP10.69□□□□□ -0.7
CTNNB1-213ENST00000482042 CLIP1P30622 1438 aa10.69□□□□□ -0.7
CTNNB1-213ENST00000482042 UACAQ9BZF9 1416 aa10.69□□□□□ -0.7
CTNNB1-213ENST00000482042 AMHR2Q16671 573 aa10.68□□□□□ -0.7
CTNNB1-213ENST00000482042 PRKD2Q9BZL6 878 aa10.68□□□□□ -0.7
CTNNB1-213ENST00000482042 RNF223E7ERA6 249 aa10.67□□□□□ -0.7
CTNNB1-213ENST00000482042 S1PR4O95977 384 aa10.67□□□□□ -0.7
CTNNB1-213ENST00000482042 GRIPAP1Q4V328 841 aa10.67□□□□□ -0.7
CTNNB1-213ENST00000482042 THAP11Q96EK4 314 aa10.67□□□□□ -0.7
CTNNB1-213ENST00000482042 IRX2Q9BZI1 471 aaPredicted RBP10.67□□□□□ -0.7
CTNNB1-213ENST00000482042 SLC27A5Q9Y2P5 690 aa10.67□□□□□ -0.7
CTNNB1-213ENST00000482042 FHOD3Q2V2M9 1422 aa10.67□□□□□ -0.7
CTNNB1-213ENST00000482042 CEP162Q5TB80 1403 aa10.67□□□□□ -0.7
CTNNB1-213ENST00000482042 SPSB2Q99619 263 aa10.66□□□□□ -0.7
CTNNB1-213ENST00000482042 REPIN1Q9BWE0 567 aaKnown RBP10.66□□□□□ -0.7
CTNNB1-213ENST00000482042 SALL2Q9Y467 1007 aaPredicted RBP10.66□□□□□ -0.7
CTNNB1-213ENST00000482042 LRRIQ1Q96JM4 1722 aa10.66□□□□□ -0.7
CTNNB1-213ENST00000482042 KDM4AO75164 1064 aa10.65□□□□□ -0.7
CTNNB1-213ENST00000482042 RANGAP1P46060 587 aaPredicted RBP10.65□□□□□ -0.7
CTNNB1-213ENST00000482042 ANKLE1Q8NAG6 615 aa10.65□□□□□ -0.7
CTNNB1-213ENST00000482042 SLC6A16Q9GZN6 736 aa10.65□□□□□ -0.7
CTNNB1-213ENST00000482042 USP46P62068 366 aa10.65□□□□□ -0.71
CTNNB1-213ENST00000482042 MAPKBP1O60336 1514 aa10.64□□□□□ -0.71
CTNNB1-213ENST00000482042 KIF13AQ9H1H9 1805 aa10.64□□□□□ -0.71
CTNNB1-213ENST00000482042 KDM5BQ9UGL1 1544 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms