RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 VARS2Q5ST30 1063 aaKnown RBP11.77□□□□□ -0.53
SEC22A-207ENST00000481965 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
SEC22A-207ENST00000481965 VPS9D1Q9Y2B5 631 aa11.77□□□□□ -0.53
SEC22A-207ENST00000481965 CFHP08603 1231 aa11.76□□□□□ -0.53
SEC22A-207ENST00000481965 HDGFL1Q5TGJ6 251 aa11.76□□□□□ -0.53
SEC22A-207ENST00000481965 PPP1R15AO75807 674 aaPredicted RBP11.75□□□□□ -0.53
SEC22A-207ENST00000481965 HELBQ8NG08 1087 aaPredicted RBP11.75□□□□□ -0.53
SEC22A-207ENST00000481965 C6orf229H3BNL8 230 aa11.74□□□□□ -0.53
SEC22A-207ENST00000481965 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
SEC22A-207ENST00000481965 ERBB3P21860 1342 aa11.73□□□□□ -0.53
SEC22A-207ENST00000481965 VAC14Q08AM6 782 aa11.73□□□□□ -0.53
SEC22A-207ENST00000481965 TSC1Q92574 1164 aa11.73□□□□□ -0.53
SEC22A-207ENST00000481965 BHMG1C9JSJ3 638 aaPredicted RBP11.72□□□□□ -0.53
SEC22A-207ENST00000481965 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
SEC22A-207ENST00000481965 WASHC4Q2M389 1173 aa11.72□□□□□ -0.53
SEC22A-207ENST00000481965 CFAP70Q5T0N1 1121 aa11.72□□□□□ -0.53
SEC22A-207ENST00000481965 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
SEC22A-207ENST00000481965 HDGFP51858 240 aaKnown RBP11.71□□□□□ -0.53
SEC22A-207ENST00000481965 SRPK2P78362 688 aaKnown RBP11.71□□□□□ -0.53
SEC22A-207ENST00000481965 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
SEC22A-207ENST00000481965 LAPTM4BQ86VI4 370 aa11.7□□□□□ -0.54
SEC22A-207ENST00000481965 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
SEC22A-207ENST00000481965 ALG2Q9H553 416 aa11.7□□□□□ -0.54
SEC22A-207ENST00000481965 PBX2P40425 430 aa11.69□□□□□ -0.54
SEC22A-207ENST00000481965 KCTD17Q8N5Z5 321 aa11.69□□□□□ -0.54
SEC22A-207ENST00000481965 NR6A1Q15406 480 aa11.68□□□□□ -0.54
SEC22A-207ENST00000481965 MORN1Q5T089 497 aa11.68□□□□□ -0.54
SEC22A-207ENST00000481965 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.67□□□□□ -0.54
SEC22A-207ENST00000481965 AEBP1Q8IUX7 1158 aa11.67□□□□□ -0.54
SEC22A-207ENST00000481965 PBXIP1Q96AQ6 731 aa11.67□□□□□ -0.54
SEC22A-207ENST00000481965 ZFRQ96KR1 1074 aaKnown RBP11.67□□□□□ -0.54
SEC22A-207ENST00000481965 UCN2Q96RP3 112 aa11.67□□□□□ -0.54
SEC22A-207ENST00000481965 RNF40O75150 1001 aa11.66□□□□□ -0.54
SEC22A-207ENST00000481965 SLC4A3P48751 1232 aa11.66□□□□□ -0.54
SEC22A-207ENST00000481965 PUS10Q3MIT2 529 aaKnown RBP11.66□□□□□ -0.54
SEC22A-207ENST00000481965 PPP1R12CQ9BZL4 782 aa11.66□□□□□ -0.54
SEC22A-207ENST00000481965 ST18O60284 1047 aa11.65□□□□□ -0.54
SEC22A-207ENST00000481965 RFX1P22670 979 aa11.65□□□□□ -0.54
SEC22A-207ENST00000481965 RETREG3Q86VR2 466 aa11.65□□□□□ -0.54
SEC22A-207ENST00000481965 ZNF687Q8N1G0 1237 aa11.65□□□□□ -0.54
SEC22A-207ENST00000481965 SLC27A5Q9Y2P5 690 aa11.65□□□□□ -0.54
SEC22A-207ENST00000481965 NBPF3Q9H094 633 aa11.64□□□□□ -0.55
SEC22A-207ENST00000481965 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
SEC22A-207ENST00000481965 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
SEC22A-207ENST00000481965 MARVELD3Q96A59 401 aa11.63□□□□□ -0.55
SEC22A-207ENST00000481965 CCDC9Q9Y3X0 531 aaKnown RBP11.63□□□□□ -0.55
SEC22A-207ENST00000481965 ACIN1Q9UKV3 1341 aaKnown RBP11.62□□□□□ -0.55
SEC22A-207ENST00000481965 PALM3A6NDB9 673 aaPredicted RBP11.62□□□□□ -0.55
SEC22A-207ENST00000481965 POTEB3A0JP26 581 aa11.61□□□□□ -0.55
SEC22A-207ENST00000481965 EMP3P54852 163 aa11.61□□□□□ -0.55
SEC22A-207ENST00000481965 DESI1Q6ICB0 168 aa11.61□□□□□ -0.55
SEC22A-207ENST00000481965 POTEBQ6S5H4 581 aa11.61□□□□□ -0.55
SEC22A-207ENST00000481965 RNF19BQ6ZMZ0 732 aa11.61□□□□□ -0.55
SEC22A-207ENST00000481965 BLOC1S3Q6QNY0 202 aa11.6□□□□□ -0.55
SEC22A-207ENST00000481965 TK2O00142 265 aa11.59□□□□□ -0.55
SEC22A-207ENST00000481965 LYPD8Q6UX82 237 aa11.59□□□□□ -0.55
SEC22A-207ENST00000481965 NPM2Q86SE8 214 aaKnown RBP11.59□□□□□ -0.55
SEC22A-207ENST00000481965 TFIP11Q9UBB9 837 aaKnown RBP11.59□□□□□ -0.55
SEC22A-207ENST00000481965 FAM205CA6NFA0 338 aa11.58□□□□□ -0.56
SEC22A-207ENST00000481965 CARNS1A5YM72 827 aa11.57□□□□□ -0.56
SEC22A-207ENST00000481965 SOX11P35716 441 aa11.57□□□□□ -0.56
SEC22A-207ENST00000481965 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
SEC22A-207ENST00000481965 Q3C1V9 767 aa11.56□□□□□ -0.56
SEC22A-207ENST00000481965 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
SEC22A-207ENST00000481965 LRCH3Q96II8 777 aa11.56□□□□□ -0.56
SEC22A-207ENST00000481965 HRO43593 1189 aa11.55□□□□□ -0.56
SEC22A-207ENST00000481965 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.55□□□□□ -0.56
SEC22A-207ENST00000481965 MAFBQ9Y5Q3 323 aaPredicted RBP11.55□□□□□ -0.56
SEC22A-207ENST00000481965 BRICD5Q6PL45 260 aa11.54□□□□□ -0.56
SEC22A-207ENST00000481965 ADGRD1Q6QNK2 874 aa11.54□□□□□ -0.56
SEC22A-207ENST00000481965 TBC1D9Q6ZT07 1266 aa11.54□□□□□ -0.56
SEC22A-207ENST00000481965 USTQ9Y2C2 406 aa11.54□□□□□ -0.56
SEC22A-207ENST00000481965 F12P00748 615 aaPredicted RBP11.53□□□□□ -0.56
SEC22A-207ENST00000481965 FBXO45P0C2W1 286 aa11.53□□□□□ -0.56
SEC22A-207ENST00000481965 THAP11Q96EK4 314 aa11.53□□□□□ -0.56
SEC22A-207ENST00000481965 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
SEC22A-207ENST00000481965 APLP1P51693 650 aa11.52□□□□□ -0.57
SEC22A-207ENST00000481965 SEMA3FQ13275 785 aa11.52□□□□□ -0.57
SEC22A-207ENST00000481965 USB1Q9BQ65 265 aaKnown RBP11.52□□□□□ -0.57
SEC22A-207ENST00000481965 GZF1Q9H116 711 aaPredicted RBP11.52□□□□□ -0.57
SEC22A-207ENST00000481965 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.57
SEC22A-207ENST00000481965 LSM11P83369 360 aaKnown RBP eCLIP11.51□□□□□ -0.57
SEC22A-207ENST00000481965 PDE4CQ08493 712 aa11.51□□□□□ -0.57
SEC22A-207ENST00000481965 NR1H3Q13133 447 aa11.51□□□□□ -0.57
SEC22A-207ENST00000481965 CDCA8Q53HL2 280 aa11.51□□□□□ -0.57
SEC22A-207ENST00000481965 CSB-PGBD3P0DP91 1061 aa11.5□□□□□ -0.57
SEC22A-207ENST00000481965 RANGAP1P46060 587 aaPredicted RBP11.5□□□□□ -0.57
SEC22A-207ENST00000481965 SCUBE3Q8IX30 993 aa11.5□□□□□ -0.57
SEC22A-207ENST00000481965 TMEM88BA6NKF7 163 aa11.49□□□□□ -0.57
SEC22A-207ENST00000481965 ATG7O95352 703 aa11.49□□□□□ -0.57
SEC22A-207ENST00000481965 MAP10Q9P2G4 905 aa11.49□□□□□ -0.57
SEC22A-207ENST00000481965 SOWAHBA6NEL2 793 aa11.48□□□□□ -0.57
SEC22A-207ENST00000481965 PIK3CDO00329 1044 aa11.48□□□□□ -0.57
SEC22A-207ENST00000481965 BRD1O95696 1058 aa11.48□□□□□ -0.57
SEC22A-207ENST00000481965 EIF4G2P78344 907 aaKnown RBP eCLIP11.48□□□□□ -0.57
SEC22A-207ENST00000481965 PRR14Q9BWN1 585 aa11.48□□□□□ -0.57
SEC22A-207ENST00000481965 FKBPLQ9UIM3 349 aa11.48□□□□□ -0.57
SEC22A-207ENST00000481965 ATP9BO43861 1147 aa11.47□□□□□ -0.57
SEC22A-207ENST00000481965 BCAMP50895 628 aa11.47□□□□□ -0.57
SEC22A-207ENST00000481965 LHX8Q68G74 356 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms