RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 LRRC59Q96AG4 307 aaKnown RBP32.72■■■□□ 2.83
GPCPD1-206ENST00000481690 ORAI2Q96SN7 254 aa32.71■■■□□ 2.83
GPCPD1-206ENST00000481690 WAPLQ7Z5K2 1190 aa32.7■■■□□ 2.83
GPCPD1-206ENST00000481690 YTHDC2Q9H6S0 1430 aaKnown RBP32.69■■■□□ 2.82
GPCPD1-206ENST00000481690 NRXN1Q9ULB1 1477 aa32.69■■■□□ 2.82
GPCPD1-206ENST00000481690 ABCC11Q96J66 1382 aa32.69■■■□□ 2.82
GPCPD1-206ENST00000481690 PNPLA6Q8IY17 1366 aa32.66■■■□□ 2.82
GPCPD1-206ENST00000481690 PLEKHH1Q9ULM0 1364 aa32.66■■■□□ 2.82
GPCPD1-206ENST00000481690 CFAP70Q5T0N1 1121 aa32.64■■■□□ 2.82
GPCPD1-206ENST00000481690 C14orf93Q9H972 538 aaKnown RBP32.64■■■□□ 2.82
GPCPD1-206ENST00000481690 HRCP23327 699 aa32.61■■■□□ 2.81
GPCPD1-206ENST00000481690 ESCO1Q5FWF5 840 aa32.61■■■□□ 2.81
GPCPD1-206ENST00000481690 ZNF772Q68DY9 489 aaPredicted RBP32.61■■■□□ 2.81
GPCPD1-206ENST00000481690 FMN2Q9NZ56 1722 aa32.6■■■□□ 2.81
GPCPD1-206ENST00000481690 DHX57Q6P158 1386 aaKnown RBP32.6■■■□□ 2.81
GPCPD1-206ENST00000481690 NUTM2FA1L443 756 aa32.6■■■□□ 2.81
GPCPD1-206ENST00000481690 SOS2Q07890 1332 aaPredicted RBP32.58■■■□□ 2.81
GPCPD1-206ENST00000481690 KDM2AQ9Y2K7 1162 aa32.55■■■□□ 2.8
GPCPD1-206ENST00000481690 NPHP3Q7Z494 1330 aa32.54■■■□□ 2.8
GPCPD1-206ENST00000481690 AFF2P51816 1311 aa32.53■■■□□ 2.8
GPCPD1-206ENST00000481690 C8orf37Q96NL8 207 aa32.53■■■□□ 2.8
GPCPD1-206ENST00000481690 DCAF11Q8TEB1 546 aa32.52■■■□□ 2.8
GPCPD1-206ENST00000481690 SIRT1Q96EB6 747 aa32.52■■■□□ 2.8
GPCPD1-206ENST00000481690 RGPD8O14715 1765 aaPredicted RBP32.52■■■□□ 2.8
GPCPD1-206ENST00000481690 KIF1AQ12756 1690 aa32.5■■■□□ 2.79
GPCPD1-206ENST00000481690 PXDNQ92626 1479 aa32.5■■■□□ 2.79
GPCPD1-206ENST00000481690 SAFB2Q14151 953 aaKnown RBP eCLIP32.5■■■□□ 2.79
GPCPD1-206ENST00000481690 COL22A1Q8NFW1 1626 aaPredicted RBP32.5■■■□□ 2.79
GPCPD1-206ENST00000481690 FOXO3O43524 673 aa32.49■■■□□ 2.79
GPCPD1-206ENST00000481690 ADAMTS2O95450 1211 aa32.49■■■□□ 2.79
GPCPD1-206ENST00000481690 XPCQ01831 940 aaPredicted RBP32.49■■■□□ 2.79
GPCPD1-206ENST00000481690 PRAM1Q96QH2 718 aa32.49■■■□□ 2.79
GPCPD1-206ENST00000481690 ADGRB1O14514 1584 aa32.49■■■□□ 2.79
GPCPD1-206ENST00000481690 DLC1Q96QB1 1528 aa32.48■■■□□ 2.79
GPCPD1-206ENST00000481690 POGKQ9P215 609 aa32.45■■■□□ 2.79
GPCPD1-206ENST00000481690 RXRBP28702 533 aa32.44■■■□□ 2.78
GPCPD1-206ENST00000481690 TRAK1Q9UPV9 953 aa32.42■■■□□ 2.78
GPCPD1-206ENST00000481690 NGLY1Q96IV0 654 aa32.41■■■□□ 2.78
GPCPD1-206ENST00000481690 STAC3Q96MF2 364 aa32.39■■■□□ 2.78
GPCPD1-206ENST00000481690 MARF1Q9Y4F3 1742 aaKnown RBP32.38■■■□□ 2.77
GPCPD1-206ENST00000481690 ADGRB2O60241 1585 aa32.38■■■□□ 2.77
GPCPD1-206ENST00000481690 QTRT2Q9H974 415 aaKnown RBP32.35■■■□□ 2.77
GPCPD1-206ENST00000481690 PHF8Q9UPP1 1060 aa32.35■■■□□ 2.77
GPCPD1-206ENST00000481690 USP32Q8NFA0 1604 aa32.34■■■□□ 2.77
GPCPD1-206ENST00000481690 CDK12Q9NYV4 1490 aaPredicted RBP32.34■■■□□ 2.77
GPCPD1-206ENST00000481690 ARHGEF28Q8N1W1 1705 aaKnown RBP32.34■■■□□ 2.77
GPCPD1-206ENST00000481690 HIRIP3Q9BW71 556 aaPredicted RBP32.33■■■□□ 2.77
GPCPD1-206ENST00000481690 MINK1Q8N4C8 1332 aaPredicted RBP32.32■■■□□ 2.76
GPCPD1-206ENST00000481690 KRT28Q7Z3Y7 464 aa32.31■■■□□ 2.76
GPCPD1-206ENST00000481690 ANKARQ7Z5J8 1434 aa32.3■■■□□ 2.76
GPCPD1-206ENST00000481690 SPATA31A3Q5VYP0 1347 aa32.29■■■□□ 2.76
GPCPD1-206ENST00000481690 USP21Q9UK80 565 aa32.29■■■□□ 2.76
GPCPD1-206ENST00000481690 RBM6P78332 1123 aaKnown RBP32.28■■■□□ 2.76
GPCPD1-206ENST00000481690 RGS12O14924 1447 aa32.26■■■□□ 2.76
GPCPD1-206ENST00000481690 KIAA1210Q9ULL0 1709 aa32.26■■■□□ 2.76
GPCPD1-206ENST00000481690 TNS3Q68CZ2 1445 aa32.26■■■□□ 2.75
GPCPD1-206ENST00000481690 PSME1Q06323 249 aa32.25■■■□□ 2.75
GPCPD1-206ENST00000481690 PMFBP1Q8TBY8 1022 aa32.25■■■□□ 2.75
GPCPD1-206ENST00000481690 EIF3AQ14152 1382 aaKnown RBP32.24■■■□□ 2.75
GPCPD1-206ENST00000481690 TULP4Q9NRJ4 1543 aa32.24■■■□□ 2.75
GPCPD1-206ENST00000481690 FNBP4Q8N3X1 1017 aaPredicted RBP32.23■■■□□ 2.75
GPCPD1-206ENST00000481690 TRPC5Q9UL62 973 aaPredicted RBP32.22■■■□□ 2.75
GPCPD1-206ENST00000481690 PLEKHG5O94827 1062 aa32.2■■■□□ 2.75
GPCPD1-206ENST00000481690 LMOD2Q6P5Q4 547 aa32.2■■■□□ 2.75
GPCPD1-206ENST00000481690 WASLO00401 505 aaPredicted RBP32.19■■■□□ 2.74
GPCPD1-206ENST00000481690 HAP1P54257 671 aaPredicted RBP32.19■■■□□ 2.74
GPCPD1-206ENST00000481690 ABCA3Q99758 1704 aa32.19■■■□□ 2.74
GPCPD1-206ENST00000481690 SBNO1A3KN83 1393 aa32.19■■■□□ 2.74
GPCPD1-206ENST00000481690 ATRNO75882 1429 aa32.18■■■□□ 2.74
GPCPD1-206ENST00000481690 ITSN1Q15811 1721 aa32.18■■■□□ 2.74
GPCPD1-206ENST00000481690 PRR36Q9H6K5 1346 aa32.18■■■□□ 2.74
GPCPD1-206ENST00000481690 UPF1Q92900 1129 aaKnown RBP eCLIP32.17■■■□□ 2.74
GPCPD1-206ENST00000481690 TRPM3Q9HCF6 1732 aaPredicted RBP32.17■■■□□ 2.74
GPCPD1-206ENST00000481690 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.16■■■□□ 2.74
GPCPD1-206ENST00000481690 BCL9LQ86UU0 1499 aa32.16■■■□□ 2.74
GPCPD1-206ENST00000481690 ARHGEF10O15013 1369 aa32.15■■■□□ 2.74
GPCPD1-206ENST00000481690 CABLES1Q8TDN4 633 aa32.13■■■□□ 2.73
GPCPD1-206ENST00000481690 GPRASP1Q5JY77 1395 aa32.12■■■□□ 2.73
GPCPD1-206ENST00000481690 NBPF1Q3BBV0 1214 aa32.1■■■□□ 2.73
GPCPD1-206ENST00000481690 PLCH1Q4KWH8 1693 aa32.1■■■□□ 2.73
GPCPD1-206ENST00000481690 ALS2Q96Q42 1657 aa32.1■■■□□ 2.73
GPCPD1-206ENST00000481690 ATP7BP35670 1465 aa32.1■■■□□ 2.73
GPCPD1-206ENST00000481690 NGDNQ8NEJ9 315 aaKnown RBP32.08■■■□□ 2.73
GPCPD1-206ENST00000481690 SLIT2O94813 1529 aa32.08■■■□□ 2.73
GPCPD1-206ENST00000481690 SIN3AQ96ST3 1273 aa32.05■■■□□ 2.72
GPCPD1-206ENST00000481690 NWD2Q9ULI1 1742 aa32.04■■■□□ 2.72
GPCPD1-206ENST00000481690 UNC5CLQ8IV45 518 aa32.04■■■□□ 2.72
GPCPD1-206ENST00000481690 NUDT16Q96DE0 195 aaKnown RBP32.04■■■□□ 2.72
GPCPD1-206ENST00000481690 CDK19Q9BWU1 502 aa32.04■■■□□ 2.72
GPCPD1-206ENST00000481690 TOPAZ1Q8N9V7 1692 aa32.04■■■□□ 2.72
GPCPD1-206ENST00000481690 L3MBTL2Q969R5 705 aa32.03■■■□□ 2.72
GPCPD1-206ENST00000481690 GJD4Q96KN9 370 aaPredicted RBP32.03■■■□□ 2.72
GPCPD1-206ENST00000481690 NEUROD1Q13562 356 aa32.02■■■□□ 2.72
GPCPD1-206ENST00000481690 QRICH2Q9H0J4 1663 aa32.02■■■□□ 2.72
GPCPD1-206ENST00000481690 PAK3O75914 559 aaPredicted RBP32.01■■■□□ 2.71
GPCPD1-206ENST00000481690 GLI3P10071 1580 aa32■■■□□ 2.71
GPCPD1-206ENST00000481690 ATAD2Q6PL18 1390 aa32■■■□□ 2.71
GPCPD1-206ENST00000481690 RALGAPBQ86X10 1494 aa31.99■■■□□ 2.71
GPCPD1-206ENST00000481690 TRPM1Q7Z4N2 1603 aa31.99■■■□□ 2.71
GPCPD1-206ENST00000481690 CRYBG1Q9Y4K1 1723 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms