RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 C14orf93Q9H972 538 aaKnown RBP34.58■■■■□ 3.13
TTC3-217ENST00000481605 CDC42BPGQ6DT37 1551 aa34.58■■■■□ 3.13
TTC3-217ENST00000481605 MYOM2P54296 1465 aa34.57■■■■□ 3.13
TTC3-217ENST00000481605 NRXN1Q9ULB1 1477 aa34.57■■■■□ 3.13
TTC3-217ENST00000481605 YTHDC2Q9H6S0 1430 aaKnown RBP34.57■■■■□ 3.12
TTC3-217ENST00000481605 KNDC1Q76NI1 1749 aa34.56■■■■□ 3.12
TTC3-217ENST00000481605 LAMC1P11047 1609 aa34.56■■■■□ 3.12
TTC3-217ENST00000481605 HRCP23327 699 aa34.55■■■■□ 3.12
TTC3-217ENST00000481605 PNPLA6Q8IY17 1366 aa34.55■■■■□ 3.12
TTC3-217ENST00000481605 ZNF772Q68DY9 489 aaPredicted RBP34.55■■■■□ 3.12
TTC3-217ENST00000481605 PLEKHH1Q9ULM0 1364 aa34.55■■■■□ 3.12
TTC3-217ENST00000481605 CFAP70Q5T0N1 1121 aa34.54■■■■□ 3.12
TTC3-217ENST00000481605 SOS2Q07890 1332 aaPredicted RBP34.53■■■■□ 3.12
TTC3-217ENST00000481605 ESCO1Q5FWF5 840 aa34.51■■■■□ 3.12
TTC3-217ENST00000481605 DHX57Q6P158 1386 aaKnown RBP34.48■■■■□ 3.11
TTC3-217ENST00000481605 NUTM2FA1L443 756 aa34.48■■■■□ 3.11
TTC3-217ENST00000481605 SIRT1Q96EB6 747 aa34.47■■■■□ 3.11
TTC3-217ENST00000481605 NPHP3Q7Z494 1330 aa34.44■■■■□ 3.1
TTC3-217ENST00000481605 AFF2P51816 1311 aa34.43■■■■□ 3.1
TTC3-217ENST00000481605 C8orf37Q96NL8 207 aa34.41■■■■□ 3.1
TTC3-217ENST00000481605 KDM2AQ9Y2K7 1162 aa34.41■■■■□ 3.1
TTC3-217ENST00000481605 FOXO3O43524 673 aa34.4■■■■□ 3.1
TTC3-217ENST00000481605 DCAF11Q8TEB1 546 aa34.4■■■■□ 3.1
TTC3-217ENST00000481605 FMN2Q9NZ56 1722 aa34.38■■■■□ 3.09
TTC3-217ENST00000481605 ADAMTS2O95450 1211 aa34.38■■■■□ 3.09
TTC3-217ENST00000481605 PRAM1Q96QH2 718 aa34.38■■■■□ 3.09
TTC3-217ENST00000481605 PXDNQ92626 1479 aa34.36■■■■□ 3.09
TTC3-217ENST00000481605 XPCQ01831 940 aaPredicted RBP34.36■■■■□ 3.09
TTC3-217ENST00000481605 RXRBP28702 533 aa34.35■■■■□ 3.09
TTC3-217ENST00000481605 SAFB2Q14151 953 aaKnown RBP eCLIP34.35■■■■□ 3.09
TTC3-217ENST00000481605 ADGRB1O14514 1584 aa34.33■■■■□ 3.09
TTC3-217ENST00000481605 DLC1Q96QB1 1528 aa34.32■■■■□ 3.08
TTC3-217ENST00000481605 STAC3Q96MF2 364 aa34.32■■■■□ 3.08
TTC3-217ENST00000481605 POGKQ9P215 609 aa34.32■■■■□ 3.08
TTC3-217ENST00000481605 NGLY1Q96IV0 654 aa34.31■■■■□ 3.08
TTC3-217ENST00000481605 COL22A1Q8NFW1 1626 aaPredicted RBP34.3■■■■□ 3.08
TTC3-217ENST00000481605 TRAK1Q9UPV9 953 aa34.29■■■■□ 3.08
TTC3-217ENST00000481605 KIF1AQ12756 1690 aa34.27■■■■□ 3.08
TTC3-217ENST00000481605 QTRT2Q9H974 415 aaKnown RBP34.27■■■■□ 3.08
TTC3-217ENST00000481605 PHF8Q9UPP1 1060 aa34.23■■■■□ 3.07
TTC3-217ENST00000481605 CDK12Q9NYV4 1490 aaPredicted RBP34.23■■■■□ 3.07
TTC3-217ENST00000481605 RGPD8O14715 1765 aaPredicted RBP34.23■■■■□ 3.07
TTC3-217ENST00000481605 KRT28Q7Z3Y7 464 aa34.21■■■■□ 3.07
TTC3-217ENST00000481605 SPATA31A3Q5VYP0 1347 aa34.2■■■■□ 3.07
TTC3-217ENST00000481605 RBM6P78332 1123 aaKnown RBP34.2■■■■□ 3.06
TTC3-217ENST00000481605 USP21Q9UK80 565 aa34.2■■■■□ 3.06
TTC3-217ENST00000481605 HIRIP3Q9BW71 556 aaPredicted RBP34.19■■■■□ 3.06
TTC3-217ENST00000481605 ADGRB2O60241 1585 aa34.19■■■■□ 3.06
TTC3-217ENST00000481605 FNBP4Q8N3X1 1017 aaPredicted RBP34.18■■■■□ 3.06
TTC3-217ENST00000481605 MINK1Q8N4C8 1332 aaPredicted RBP34.16■■■■□ 3.06
TTC3-217ENST00000481605 ANKARQ7Z5J8 1434 aa34.16■■■■□ 3.06
TTC3-217ENST00000481605 PSME1Q06323 249 aa34.14■■■■□ 3.06
TTC3-217ENST00000481605 USP32Q8NFA0 1604 aa34.13■■■■□ 3.05
TTC3-217ENST00000481605 PMFBP1Q8TBY8 1022 aa34.12■■■■□ 3.05
TTC3-217ENST00000481605 TRPC5Q9UL62 973 aaPredicted RBP34.12■■■■□ 3.05
TTC3-217ENST00000481605 RGS12O14924 1447 aa34.12■■■■□ 3.05
TTC3-217ENST00000481605 UPF1Q92900 1129 aaKnown RBP eCLIP34.1■■■■□ 3.05
TTC3-217ENST00000481605 TNS3Q68CZ2 1445 aa34.1■■■■□ 3.05
TTC3-217ENST00000481605 MARF1Q9Y4F3 1742 aaKnown RBP34.09■■■■□ 3.05
TTC3-217ENST00000481605 EIF3AQ14152 1382 aaKnown RBP34.08■■■■□ 3.05
TTC3-217ENST00000481605 WASLO00401 505 aaPredicted RBP34.08■■■■□ 3.05
TTC3-217ENST00000481605 SBNO1A3KN83 1393 aa34.07■■■■□ 3.04
TTC3-217ENST00000481605 ARHGEF28Q8N1W1 1705 aaKnown RBP34.06■■■■□ 3.04
TTC3-217ENST00000481605 ATRNO75882 1429 aa34.06■■■■□ 3.04
TTC3-217ENST00000481605 PRR36Q9H6K5 1346 aa34.06■■■■□ 3.04
TTC3-217ENST00000481605 TULP4Q9NRJ4 1543 aa34.05■■■■□ 3.04
TTC3-217ENST00000481605 BCL9LQ86UU0 1499 aa34.05■■■■□ 3.04
TTC3-217ENST00000481605 LMOD2Q6P5Q4 547 aa34.04■■■■□ 3.04
TTC3-217ENST00000481605 HAP1P54257 671 aaPredicted RBP34.02■■■■□ 3.04
TTC3-217ENST00000481605 PLEKHG5O94827 1062 aa34.01■■■■□ 3.04
TTC3-217ENST00000481605 CABLES1Q8TDN4 633 aa34.01■■■■□ 3.04
TTC3-217ENST00000481605 KIAA1210Q9ULL0 1709 aa34.01■■■■□ 3.03
TTC3-217ENST00000481605 ARHGEF10O15013 1369 aa34■■■■□ 3.03
TTC3-217ENST00000481605 NBPF1Q3BBV0 1214 aa33.98■■■■□ 3.03
TTC3-217ENST00000481605 GPRASP1Q5JY77 1395 aa33.97■■■■□ 3.03
TTC3-217ENST00000481605 SLIT2O94813 1529 aa33.95■■■■□ 3.03
TTC3-217ENST00000481605 UNC5CLQ8IV45 518 aa33.94■■■■□ 3.02
TTC3-217ENST00000481605 NGDNQ8NEJ9 315 aaKnown RBP33.94■■■■□ 3.02
TTC3-217ENST00000481605 TRPM3Q9HCF6 1732 aaPredicted RBP33.93■■■■□ 3.02
TTC3-217ENST00000481605 GJD4Q96KN9 370 aaPredicted RBP33.93■■■■□ 3.02
TTC3-217ENST00000481605 NUDT16Q96DE0 195 aaKnown RBP33.92■■■■□ 3.02
TTC3-217ENST00000481605 ATP7BP35670 1465 aa33.92■■■■□ 3.02
TTC3-217ENST00000481605 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.91■■■■□ 3.02
TTC3-217ENST00000481605 CDK19Q9BWU1 502 aa33.91■■■■□ 3.02
TTC3-217ENST00000481605 L3MBTL2Q969R5 705 aa33.9■■■■□ 3.02
TTC3-217ENST00000481605 ABCA3Q99758 1704 aa33.9■■■■□ 3.02
TTC3-217ENST00000481605 SIN3AQ96ST3 1273 aa33.89■■■■□ 3.02
TTC3-217ENST00000481605 ITSN1Q15811 1721 aa33.88■■■■□ 3.01
TTC3-217ENST00000481605 ALS2Q96Q42 1657 aa33.87■■■■□ 3.01
TTC3-217ENST00000481605 ATAD2Q6PL18 1390 aa33.86■■■■□ 3.01
TTC3-217ENST00000481605 PAK3O75914 559 aaPredicted RBP33.85■■■■□ 3.01
TTC3-217ENST00000481605 RALGAPBQ86X10 1494 aa33.84■■■■□ 3.01
TTC3-217ENST00000481605 NEUROD1Q13562 356 aa33.84■■■■□ 3.01
TTC3-217ENST00000481605 PLCH1Q4KWH8 1693 aa33.82■■■■□ 3
TTC3-217ENST00000481605 GLI3P10071 1580 aa33.81■■■■□ 3
TTC3-217ENST00000481605 FAM83GA6ND36 823 aa33.81■■■■□ 3
TTC3-217ENST00000481605 CENPJQ9HC77 1338 aaPredicted RBP33.81■■■■□ 3
TTC3-217ENST00000481605 CCDC61Q9Y6R9 512 aa33.8■■■■□ 3
TTC3-217ENST00000481605 NWD2Q9ULI1 1742 aa33.8■■■■□ 3
TTC3-217ENST00000481605 VPS72Q15906 364 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms