RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 DIP2AQ14689 1571 aa15.42■□□□□ 0.06
APTX-223ENST00000479656 FAM135BQ49AJ0 1406 aa15.42■□□□□ 0.06
APTX-223ENST00000479656 TULP4Q9NRJ4 1543 aa15.41■□□□□ 0.06
APTX-223ENST00000479656 PER1O15534 1290 aaPredicted RBP15.41■□□□□ 0.06
APTX-223ENST00000479656 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
APTX-223ENST00000479656 CDK19Q9BWU1 502 aa15.41■□□□□ 0.06
APTX-223ENST00000479656 KNDC1Q76NI1 1749 aa15.41■□□□□ 0.06
APTX-223ENST00000479656 PUS7Q96PZ0 661 aaKnown RBP15.4■□□□□ 0.06
APTX-223ENST00000479656 CPS1P31327 1500 aa15.4■□□□□ 0.06
APTX-223ENST00000479656 TMC1Q8TDI8 760 aa15.4■□□□□ 0.06
APTX-223ENST00000479656 PIK3R4Q99570 1358 aa15.39■□□□□ 0.05
APTX-223ENST00000479656 KCNA6P17658 529 aa15.39■□□□□ 0.05
APTX-223ENST00000479656 SLC12A5Q9H2X9 1139 aa15.39■□□□□ 0.05
APTX-223ENST00000479656 PRKRIP1Q9H875 184 aaPredicted RBP15.39■□□□□ 0.05
APTX-223ENST00000479656 LMTK3Q96Q04 1460 aa15.37■□□□□ 0.05
APTX-223ENST00000479656 WASLO00401 505 aaPredicted RBP15.37■□□□□ 0.05
APTX-223ENST00000479656 MYOM1P52179 1685 aa15.36■□□□□ 0.05
APTX-223ENST00000479656 CARD14Q9BXL6 1004 aa15.34■□□□□ 0.05
APTX-223ENST00000479656 KNSTRNQ9Y448 316 aa15.34■□□□□ 0.05
APTX-223ENST00000479656 PTCH1Q13635 1447 aa15.34■□□□□ 0.05
APTX-223ENST00000479656 XRN1Q8IZH2 1706 aaKnown RBP15.33■□□□□ 0.05
APTX-223ENST00000479656 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.33■□□□□ 0.05
APTX-223ENST00000479656 CCER2I3L3R5 266 aa15.33■□□□□ 0.05
APTX-223ENST00000479656 CHD2O14647 1828 aaKnown RBP15.33■□□□□ 0.04
APTX-223ENST00000479656 ATAD2Q6PL18 1390 aa15.33■□□□□ 0.04
APTX-223ENST00000479656 CC2D1BQ5T0F9 858 aaKnown RBP15.32■□□□□ 0.04
APTX-223ENST00000479656 CABP1Q9NZU7 370 aa15.32■□□□□ 0.04
APTX-223ENST00000479656 RBM33Q96EV2 1170 aaKnown RBP15.31■□□□□ 0.04
APTX-223ENST00000479656 NUDT16Q96DE0 195 aaKnown RBP15.31■□□□□ 0.04
APTX-223ENST00000479656 NUTM2FA1L443 756 aa15.29■□□□□ 0.04
APTX-223ENST00000479656 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
APTX-223ENST00000479656 KTN1Q86UP2 1357 aaKnown RBP15.29■□□□□ 0.04
APTX-223ENST00000479656 RALBP1Q15311 655 aa15.29■□□□□ 0.04
APTX-223ENST00000479656 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
APTX-223ENST00000479656 NINLQ9Y2I6 1382 aa15.28■□□□□ 0.04
APTX-223ENST00000479656 ANKRD36BQ8N2N9 1353 aa15.28■□□□□ 0.04
APTX-223ENST00000479656 TERF2IPQ9NYB0 399 aa15.27■□□□□ 0.04
APTX-223ENST00000479656 CCDC61Q9Y6R9 512 aa15.27■□□□□ 0.04
APTX-223ENST00000479656 PRR36Q9H6K5 1346 aa15.27■□□□□ 0.04
APTX-223ENST00000479656 PROSER2Q86WR7 435 aaPredicted RBP15.27■□□□□ 0.03
APTX-223ENST00000479656 ADGRB2O60241 1585 aa15.26■□□□□ 0.03
APTX-223ENST00000479656 STRCQ7RTU9 1775 aa15.26■□□□□ 0.03
APTX-223ENST00000479656 A0A1W2PP64 1363 aa15.26■□□□□ 0.03
APTX-223ENST00000479656 YTHDC1Q96MU7 727 aaKnown RBP15.26■□□□□ 0.03
APTX-223ENST00000479656 NSD3Q9BZ95 1437 aa15.26■□□□□ 0.03
APTX-223ENST00000479656 PARD3Q8TEW0 1356 aa15.25■□□□□ 0.03
APTX-223ENST00000479656 HDGFL2Q7Z4V5 671 aaPredicted RBP15.25■□□□□ 0.03
APTX-223ENST00000479656 PPIP5K1Q6PFW1 1433 aa15.25■□□□□ 0.03
APTX-223ENST00000479656 CD163L1Q9NR16 1453 aa15.24■□□□□ 0.03
APTX-223ENST00000479656 NPC1L1Q9UHC9 1359 aa15.23■□□□□ 0.03
APTX-223ENST00000479656 MYBBP1AQ9BQG0 1328 aaKnown RBP15.23■□□□□ 0.03
APTX-223ENST00000479656 C14orf37Q86TY3 774 aa15.23■□□□□ 0.03
APTX-223ENST00000479656 MRS2Q9HD23 443 aa15.23■□□□□ 0.03
APTX-223ENST00000479656 NWD1Q149M9 1564 aa15.23■□□□□ 0.03
APTX-223ENST00000479656 ATP7BP35670 1465 aa15.23■□□□□ 0.03
APTX-223ENST00000479656 CGNL1Q0VF96 1302 aa15.21■□□□□ 0.03
APTX-223ENST00000479656 PLEKHG3A1L390 1219 aa15.2■□□□□ 0.02
APTX-223ENST00000479656 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
APTX-223ENST00000479656 CPSF1Q10570 1443 aaKnown RBP15.19■□□□□ 0.02
APTX-223ENST00000479656 ADGRL3Q9HAR2 1447 aa15.19■□□□□ 0.02
APTX-223ENST00000479656 PMFBP1Q8TBY8 1022 aa15.19■□□□□ 0.02
APTX-223ENST00000479656 ZNF692Q9BU19 519 aaPredicted RBP15.19■□□□□ 0.02
APTX-223ENST00000479656 STRCP1A6NGW2 1772 aa15.19■□□□□ 0.02
APTX-223ENST00000479656 NKTRP30414 1462 aaKnown RBP15.19■□□□□ 0.02
APTX-223ENST00000479656 ACEP12821 1306 aa15.19■□□□□ 0.02
APTX-223ENST00000479656 USP32Q8NFA0 1604 aa15.18■□□□□ 0.02
APTX-223ENST00000479656 MORC1Q86VD1 984 aa15.18■□□□□ 0.02
APTX-223ENST00000479656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.18■□□□□ 0.023e-6■■■□□ 18.1
APTX-223ENST00000479656 FYB1O15117 783 aa15.18■□□□□ 0.02
APTX-223ENST00000479656 PPP2R1AP30153 589 aa15.18■□□□□ 0.02
APTX-223ENST00000479656 NLRP13Q86W25 1043 aa15.18■□□□□ 0.02
APTX-223ENST00000479656 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
APTX-223ENST00000479656 GGNBP2Q9H3C7 697 aa15.17■□□□□ 0.02
APTX-223ENST00000479656 DMRT2Q9Y5R5 561 aa15.17■□□□□ 0.02
APTX-223ENST00000479656 ZNF335Q9H4Z2 1342 aaPredicted RBP15.17■□□□□ 0.02
APTX-223ENST00000479656 CDC42BPGQ6DT37 1551 aa15.17■□□□□ 0.02
APTX-223ENST00000479656 BRD4O60885 1362 aaPredicted RBP15.16■□□□□ 0.02
APTX-223ENST00000479656 FAM9BQ8IZU0 186 aa15.16■□□□□ 0.02
APTX-223ENST00000479656 C19orf44Q9H6X5 657 aa15.16■□□□□ 0.02
APTX-223ENST00000479656 ANKARQ7Z5J8 1434 aa15.16■□□□□ 0.02
APTX-223ENST00000479656 RGPD8O14715 1765 aaPredicted RBP15.16■□□□□ 0.02
APTX-223ENST00000479656 FMN2Q9NZ56 1722 aa15.16■□□□□ 0.02
APTX-223ENST00000479656 TNNT2P45379 298 aaPredicted RBP15.16■□□□□ 0.02
APTX-223ENST00000479656 TOPAZ1Q8N9V7 1692 aa15.15■□□□□ 0.02
APTX-223ENST00000479656 NGDNQ8NEJ9 315 aaKnown RBP15.15■□□□□ 0.02
APTX-223ENST00000479656 NSD2O96028 1365 aa15.14■□□□□ 0.01
APTX-223ENST00000479656 EDC4Q6P2E9 1401 aaKnown RBP15.14■□□□□ 0.01
APTX-223ENST00000479656 ESCO1Q5FWF5 840 aa15.13■□□□□ 0.01
APTX-223ENST00000479656 PNISRQ8TF01 805 aaKnown RBP15.13■□□□□ 0.01
APTX-223ENST00000479656 NCOA3Q9Y6Q9 1424 aa15.13■□□□□ 0.01
APTX-223ENST00000479656 NME9Q86XW9 330 aa15.12■□□□□ 0.01
APTX-223ENST00000479656 PHF8Q9UPP1 1060 aa15.12■□□□□ 0.01
APTX-223ENST00000479656 AKAP12Q02952 1782 aa15.12■□□□□ 0.01
APTX-223ENST00000479656 ATF3P18847 181 aa15.12■□□□□ 0.01
APTX-223ENST00000479656 POLR3AO14802 1390 aaPredicted RBP15.11■□□□□ 0.01
APTX-223ENST00000479656 ITSN1Q15811 1721 aa15.11■□□□□ 0.01
APTX-223ENST00000479656 ORAI2Q96SN7 254 aa15.11■□□□□ 0.01
APTX-223ENST00000479656 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
APTX-223ENST00000479656 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
APTX-223ENST00000479656 USP6P35125 1406 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 336.2 ms