RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 ABCC11Q96J66 1382 aa19.95■□□□□ 0.78
ABCF1-206ENST00000479542 CDC42BPGQ6DT37 1551 aa19.94■□□□□ 0.78
ABCF1-206ENST00000479542 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
ABCF1-206ENST00000479542 SPATA31E1Q6ZUB1 1445 aa19.93■□□□□ 0.78
ABCF1-206ENST00000479542 SIRT1Q96EB6 747 aa19.93■□□□□ 0.78
ABCF1-206ENST00000479542 COL22A1Q8NFW1 1626 aaPredicted RBP19.93■□□□□ 0.78
ABCF1-206ENST00000479542 RGS12O14924 1447 aa19.93■□□□□ 0.78
ABCF1-206ENST00000479542 TRPC5Q9UL62 973 aaPredicted RBP19.92■□□□□ 0.78
ABCF1-206ENST00000479542 LRPPRCP42704 1394 aaKnown RBP19.92■□□□□ 0.78
ABCF1-206ENST00000479542 ADGRF5Q8IZF2 1346 aa19.91■□□□□ 0.78
ABCF1-206ENST00000479542 ADAMTS2O95450 1211 aa19.9■□□□□ 0.78
ABCF1-206ENST00000479542 USP21Q9UK80 565 aa19.9■□□□□ 0.78
ABCF1-206ENST00000479542 MYOM2P54296 1465 aa19.89■□□□□ 0.77
ABCF1-206ENST00000479542 ESCO1Q5FWF5 840 aa19.89■□□□□ 0.77
ABCF1-206ENST00000479542 MPHOSPH9Q99550 1183 aa19.89■□□□□ 0.77
ABCF1-206ENST00000479542 PXDNQ92626 1479 aa19.88■□□□□ 0.77
ABCF1-206ENST00000479542 PIK3C2GO75747 1445 aa19.86■□□□□ 0.77
ABCF1-206ENST00000479542 ATRNO75882 1429 aa19.86■□□□□ 0.77
ABCF1-206ENST00000479542 FOXO3O43524 673 aa19.85■□□□□ 0.77
ABCF1-206ENST00000479542 FOXD1Q16676 465 aa19.85■□□□□ 0.77
ABCF1-206ENST00000479542 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
ABCF1-206ENST00000479542 ATAD2Q6PL18 1390 aa19.84■□□□□ 0.77
ABCF1-206ENST00000479542 RGL3Q3MIN7 710 aa19.84■□□□□ 0.77
ABCF1-206ENST00000479542 KNDC1Q76NI1 1749 aa19.84■□□□□ 0.77
ABCF1-206ENST00000479542 WAPLQ7Z5K2 1190 aa19.83■□□□□ 0.77
ABCF1-206ENST00000479542 C14orf93Q9H972 538 aaKnown RBP19.83■□□□□ 0.77
ABCF1-206ENST00000479542 BCL9LQ86UU0 1499 aa19.82■□□□□ 0.76
ABCF1-206ENST00000479542 CCDC125Q86Z20 511 aa19.82■□□□□ 0.76
ABCF1-206ENST00000479542 YTHDC2Q9H6S0 1430 aaKnown RBP19.81■□□□□ 0.76
ABCF1-206ENST00000479542 STK26Q9P289 416 aa19.8■□□□□ 0.76
ABCF1-206ENST00000479542 NRXN1Q9ULB1 1477 aa19.79■□□□□ 0.76
ABCF1-206ENST00000479542 SPATA31A3Q5VYP0 1347 aa19.79■□□□□ 0.76
ABCF1-206ENST00000479542 TMEM132EQ6IEE7 984 aa19.79■□□□□ 0.76
ABCF1-206ENST00000479542 GJD4Q96KN9 370 aaPredicted RBP19.78■□□□□ 0.76
ABCF1-206ENST00000479542 MARF1Q9Y4F3 1742 aaKnown RBP19.78■□□□□ 0.76
ABCF1-206ENST00000479542 DHX57Q6P158 1386 aaKnown RBP19.77■□□□□ 0.76
ABCF1-206ENST00000479542 PLEKHH1Q9ULM0 1364 aa19.77■□□□□ 0.76
ABCF1-206ENST00000479542 KIF1AQ12756 1690 aa19.77■□□□□ 0.76
ABCF1-206ENST00000479542 FMN2Q9NZ56 1722 aa19.76■□□□□ 0.75
ABCF1-206ENST00000479542 SLIT2O94813 1529 aa19.76■□□□□ 0.75
ABCF1-206ENST00000479542 PSME1Q06323 249 aa19.75■□□□□ 0.75
ABCF1-206ENST00000479542 UNC5CLQ8IV45 518 aa19.75■□□□□ 0.75
ABCF1-206ENST00000479542 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.75■□□□□ 0.75
ABCF1-206ENST00000479542 KRT28Q7Z3Y7 464 aa19.74■□□□□ 0.75
ABCF1-206ENST00000479542 STAC3Q96MF2 364 aa19.74■□□□□ 0.75
ABCF1-206ENST00000479542 XPCQ01831 940 aaPredicted RBP19.73■□□□□ 0.75
ABCF1-206ENST00000479542 SBNO1A3KN83 1393 aa19.72■□□□□ 0.75
ABCF1-206ENST00000479542 PHF8Q9UPP1 1060 aa19.72■□□□□ 0.75
ABCF1-206ENST00000479542 NUTM2FA1L443 756 aa19.71■□□□□ 0.75
ABCF1-206ENST00000479542 DLC1Q96QB1 1528 aa19.71■□□□□ 0.75
ABCF1-206ENST00000479542 EP400Q96L91 3159 aa19.7■□□□□ 0.74
ABCF1-206ENST00000479542 CFAP70Q5T0N1 1121 aa19.7■□□□□ 0.74
ABCF1-206ENST00000479542 ANKARQ7Z5J8 1434 aa19.69■□□□□ 0.74
ABCF1-206ENST00000479542 ONECUT3O60422 494 aaPredicted RBP19.69■□□□□ 0.74
ABCF1-206ENST00000479542 TNS3Q68CZ2 1445 aa19.68■□□□□ 0.74
ABCF1-206ENST00000479542 ZRANB1Q9UGI0 708 aa19.68■□□□□ 0.74
ABCF1-206ENST00000479542 ARHGEF10O15013 1369 aa19.68■□□□□ 0.74
ABCF1-206ENST00000479542 RALGAPBQ86X10 1494 aa19.67■□□□□ 0.74
ABCF1-206ENST00000479542 SRCAPQ6ZRS2 3230 aa19.66■□□□□ 0.74
ABCF1-206ENST00000479542 USP32Q8NFA0 1604 aa19.66■□□□□ 0.74
ABCF1-206ENST00000479542 VPS72Q15906 364 aa19.66■□□□□ 0.74
ABCF1-206ENST00000479542 PRAM1Q96QH2 718 aa19.66■□□□□ 0.74
ABCF1-206ENST00000479542 HRCP23327 699 aa19.65■□□□□ 0.74
ABCF1-206ENST00000479542 ADGRB2O60241 1585 aa19.64■□□□□ 0.73
ABCF1-206ENST00000479542 GLI3P10071 1580 aa19.64■□□□□ 0.73
ABCF1-206ENST00000479542 BLMP54132 1417 aaPredicted RBP19.63■□□□□ 0.73
ABCF1-206ENST00000479542 EIF3AQ14152 1382 aaKnown RBP19.63■□□□□ 0.73
ABCF1-206ENST00000479542 NWD2Q9ULI1 1742 aa19.62■□□□□ 0.73
ABCF1-206ENST00000479542 POGKQ9P215 609 aa19.62■□□□□ 0.73
ABCF1-206ENST00000479542 RGPD8O14715 1765 aaPredicted RBP19.62■□□□□ 0.73
ABCF1-206ENST00000479542 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
ABCF1-206ENST00000479542 HAP1P54257 671 aaPredicted RBP19.6■□□□□ 0.73
ABCF1-206ENST00000479542 RAB3GAP2Q9H2M9 1393 aa19.59■□□□□ 0.73
ABCF1-206ENST00000479542 SEPT12Q8IYM1 358 aa19.59■□□□□ 0.73
ABCF1-206ENST00000479542 FAM83GA6ND36 823 aa19.57■□□□□ 0.72
ABCF1-206ENST00000479542 CABLES1Q8TDN4 633 aa19.57■□□□□ 0.72
ABCF1-206ENST00000479542 GPRASP1Q5JY77 1395 aa19.57■□□□□ 0.72
ABCF1-206ENST00000479542 SAFB2Q14151 953 aaKnown RBP eCLIP19.56■□□□□ 0.72
ABCF1-206ENST00000479542 WASLO00401 505 aaPredicted RBP19.55■□□□□ 0.72
ABCF1-206ENST00000479542 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
ABCF1-206ENST00000479542 ABCA3Q99758 1704 aa19.54■□□□□ 0.72
ABCF1-206ENST00000479542 TRAK1Q9UPV9 953 aa19.54■□□□□ 0.72
ABCF1-206ENST00000479542 TULP4Q9NRJ4 1543 aa19.54■□□□□ 0.72
ABCF1-206ENST00000479542 TRPM3Q9HCF6 1732 aaPredicted RBP19.54■□□□□ 0.72
ABCF1-206ENST00000479542 SF3B2Q13435 895 aaKnown RBP19.53■□□□□ 0.72
ABCF1-206ENST00000479542 LMOD2Q6P5Q4 547 aa19.53■□□□□ 0.72
ABCF1-206ENST00000479542 KRT27Q7Z3Y8 459 aa19.53■□□□□ 0.72
ABCF1-206ENST00000479542 DCAF11Q8TEB1 546 aa19.53■□□□□ 0.72
ABCF1-206ENST00000479542 BRWD3Q6RI45 1802 aa19.53■□□□□ 0.72
ABCF1-206ENST00000479542 PLCH1Q4KWH8 1693 aa19.52■□□□□ 0.72
ABCF1-206ENST00000479542 PRR36Q9H6K5 1346 aa19.52■□□□□ 0.72
ABCF1-206ENST00000479542 ALS2Q96Q42 1657 aa19.52■□□□□ 0.71
ABCF1-206ENST00000479542 BTG4Q9NY30 223 aa19.49■□□□□ 0.71
ABCF1-206ENST00000479542 CCDC9Q9Y3X0 531 aaKnown RBP19.49■□□□□ 0.71
ABCF1-206ENST00000479542 COL14A1Q05707 1796 aaKnown RBP19.49■□□□□ 0.71
ABCF1-206ENST00000479542 MINK1Q8N4C8 1332 aaPredicted RBP19.49■□□□□ 0.71
ABCF1-206ENST00000479542 NGDNQ8NEJ9 315 aaKnown RBP19.48■□□□□ 0.71
ABCF1-206ENST00000479542 HIRIP3Q9BW71 556 aaPredicted RBP19.48■□□□□ 0.71
ABCF1-206ENST00000479542 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
ABCF1-206ENST00000479542 NRAPQ86VF7 1730 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms