RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 UPF2Q9HAU5 1272 aaKnown RBP14.01□□□□□ -0.17
LRRFIP1-211ENST00000478958 PDZRN3Q9UPQ7 1066 aa14□□□□□ -0.17
LRRFIP1-211ENST00000478958 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
LRRFIP1-211ENST00000478958 MADDQ8WXG6 1647 aa13.99□□□□□ -0.17
LRRFIP1-211ENST00000478958 GZF1Q9H116 711 aaPredicted RBP13.99□□□□□ -0.17
LRRFIP1-211ENST00000478958 SYNMO15061 1565 aa13.98□□□□□ -0.17
LRRFIP1-211ENST00000478958 NUTM2DQ5VT03 806 aaPredicted RBP13.98□□□□□ -0.17
LRRFIP1-211ENST00000478958 PLCH2O75038 1416 aa13.98□□□□□ -0.17
LRRFIP1-211ENST00000478958 MTHFSP49914 203 aa13.98□□□□□ -0.17
LRRFIP1-211ENST00000478958 RNF17Q9BXT8 1623 aaKnown RBP13.98□□□□□ -0.17
LRRFIP1-211ENST00000478958 RUNDC1Q96C34 613 aa13.97□□□□□ -0.17
LRRFIP1-211ENST00000478958 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
LRRFIP1-211ENST00000478958 NPC1L1Q9UHC9 1359 aa13.97□□□□□ -0.17
LRRFIP1-211ENST00000478958 ERCC6L2Q5T890 1561 aa13.97□□□□□ -0.17
LRRFIP1-211ENST00000478958 PLXNC1O60486 1568 aa13.97□□□□□ -0.17
LRRFIP1-211ENST00000478958 SAFB2Q14151 953 aaKnown RBP eCLIP13.97□□□□□ -0.17
LRRFIP1-211ENST00000478958 PMFBP1Q8TBY8 1022 aa13.97□□□□□ -0.17
LRRFIP1-211ENST00000478958 U2AF1L5P0DN76 240 aaPredicted RBP13.96□□□□□ -0.17
LRRFIP1-211ENST00000478958 U2AF1Q01081 240 aaKnown RBP eCLIP13.96□□□□□ -0.17
LRRFIP1-211ENST00000478958 TBC1D2Q9BYX2 928 aa13.96□□□□□ -0.17
LRRFIP1-211ENST00000478958 NSD3Q9BZ95 1437 aa13.96□□□□□ -0.17
LRRFIP1-211ENST00000478958 UGGT1Q9NYU2 1555 aa13.96□□□□□ -0.17
LRRFIP1-211ENST00000478958 ERVK-7P63135 1459 aa13.96□□□□□ -0.18
LRRFIP1-211ENST00000478958 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.18
LRRFIP1-211ENST00000478958 IPO4Q8TEX9 1081 aaKnown RBP13.96□□□□□ -0.18
LRRFIP1-211ENST00000478958 ZHX1Q9UKY1 873 aaPredicted RBP13.96□□□□□ -0.18
LRRFIP1-211ENST00000478958 KANK1Q14678 1352 aa13.95□□□□□ -0.18
LRRFIP1-211ENST00000478958 TSR2Q969E8 191 aaKnown RBP13.95□□□□□ -0.18
LRRFIP1-211ENST00000478958 ABCC2Q92887 1545 aa13.95□□□□□ -0.18
LRRFIP1-211ENST00000478958 XRCC6P12956 609 aaKnown RBP eCLIP13.95□□□□□ -0.18
LRRFIP1-211ENST00000478958 MFAP1P55081 439 aaKnown RBP13.95□□□□□ -0.18
LRRFIP1-211ENST00000478958 SCAPERQ9BY12 1400 aa13.95□□□□□ -0.18
LRRFIP1-211ENST00000478958 NCLP19338 710 aaKnown RBP13.94□□□□□ -0.18
LRRFIP1-211ENST00000478958 IQGAP1P46940 1657 aa13.94□□□□□ -0.18
LRRFIP1-211ENST00000478958 GOLGA6L3A6NEY3 463 aa13.94□□□□□ -0.18
LRRFIP1-211ENST00000478958 SMAP1Q8IYB5 467 aaPredicted RBP13.94□□□□□ -0.18
LRRFIP1-211ENST00000478958 CLASP1Q7Z460 1538 aa13.93□□□□□ -0.18
LRRFIP1-211ENST00000478958 RWDD1Q9H446 243 aaPredicted RBP13.93□□□□□ -0.18
LRRFIP1-211ENST00000478958 CLTCL1P53675 1640 aa13.93□□□□□ -0.18
LRRFIP1-211ENST00000478958 TBC1D32Q96NH3 1257 aa13.93□□□□□ -0.18
LRRFIP1-211ENST00000478958 ESPNB1AK53 854 aa13.92□□□□□ -0.18
LRRFIP1-211ENST00000478958 U2SURPO15042 1029 aaKnown RBP13.92□□□□□ -0.18
LRRFIP1-211ENST00000478958 POLR3AO14802 1390 aaPredicted RBP13.92□□□□□ -0.18
LRRFIP1-211ENST00000478958 NGEFQ8N5V2 710 aa13.92□□□□□ -0.18
LRRFIP1-211ENST00000478958 TRPM2O94759 1503 aa13.92□□□□□ -0.18
LRRFIP1-211ENST00000478958 PANK2Q9BZ23 570 aa13.91□□□□□ -0.18
LRRFIP1-211ENST00000478958 MYOM1P52179 1685 aa13.91□□□□□ -0.18
LRRFIP1-211ENST00000478958 PTPRTO14522 1441 aa13.91□□□□□ -0.18
LRRFIP1-211ENST00000478958 CFAP53Q96M91 514 aa13.91□□□□□ -0.18
LRRFIP1-211ENST00000478958 ANTXR1Q9H6X2 564 aa13.91□□□□□ -0.18
LRRFIP1-211ENST00000478958 ITPRIPQ8IWB1 547 aa13.9□□□□□ -0.18
LRRFIP1-211ENST00000478958 MAP7D2Q96T17 732 aa13.9□□□□□ -0.18
LRRFIP1-211ENST00000478958 SMC4Q9NTJ3 1288 aa13.9□□□□□ -0.18
LRRFIP1-211ENST00000478958 GGT6Q6P531 493 aa13.89□□□□□ -0.19
LRRFIP1-211ENST00000478958 KDM5AP29375 1690 aaKnown RBP13.89□□□□□ -0.19
LRRFIP1-211ENST00000478958 MVPQ14764 893 aaKnown RBP13.89□□□□□ -0.19
LRRFIP1-211ENST00000478958 ZKSCAN2Q63HK3 967 aa13.89□□□□□ -0.19
LRRFIP1-211ENST00000478958 KIAA1211Q6ZU35 1233 aa13.89□□□□□ -0.19
LRRFIP1-211ENST00000478958 DZIP1LQ8IYY4 767 aaKnown RBP13.89□□□□□ -0.19
LRRFIP1-211ENST00000478958 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
LRRFIP1-211ENST00000478958 NINLQ9Y2I6 1382 aa13.88□□□□□ -0.19
LRRFIP1-211ENST00000478958 WDR63Q8IWG1 891 aa13.88□□□□□ -0.19
LRRFIP1-211ENST00000478958 ABCC1P33527 1531 aa13.88□□□□□ -0.19
LRRFIP1-211ENST00000478958 NLRP1Q9C000 1473 aa13.88□□□□□ -0.19
LRRFIP1-211ENST00000478958 EXOSC9Q06265 439 aaKnown RBP13.88□□□□□ -0.19
LRRFIP1-211ENST00000478958 C22orf23Q9BZE7 217 aa13.88□□□□□ -0.19
LRRFIP1-211ENST00000478958 CABP2Q9NPB3 220 aa13.88□□□□□ -0.19
LRRFIP1-211ENST00000478958 NOS1P29475 1434 aa13.88□□□□□ -0.19
LRRFIP1-211ENST00000478958 SPHKAPQ2M3C7 1700 aa13.87□□□□□ -0.19
LRRFIP1-211ENST00000478958 TRIM27P14373 513 aa13.85□□□□□ -0.19
LRRFIP1-211ENST00000478958 GGNBP2Q9H3C7 697 aa13.85□□□□□ -0.19
LRRFIP1-211ENST00000478958 TRIM44Q96DX7 344 aaPredicted RBP13.85□□□□□ -0.19
LRRFIP1-211ENST00000478958 FAM13BQ9NYF5 915 aa13.85□□□□□ -0.19
LRRFIP1-211ENST00000478958 STK26Q9P289 416 aa13.85□□□□□ -0.19
LRRFIP1-211ENST00000478958 MCM4P33991 863 aa13.85□□□□□ -0.19
LRRFIP1-211ENST00000478958 SSH1Q8WYL5 1049 aa13.85□□□□□ -0.19
LRRFIP1-211ENST00000478958 PRDM10Q9NQV6 1147 aa13.85□□□□□ -0.19
LRRFIP1-211ENST00000478958 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
LRRFIP1-211ENST00000478958 ERBB4Q15303 1308 aa13.84□□□□□ -0.19
LRRFIP1-211ENST00000478958 FSD2A1L4K1 749 aa13.84□□□□□ -0.19
LRRFIP1-211ENST00000478958 NOB1Q9ULX3 412 aaKnown RBP13.83□□□□□ -0.2
LRRFIP1-211ENST00000478958 ZFYVE16Q7Z3T8 1539 aa13.83□□□□□ -0.2
LRRFIP1-211ENST00000478958 CEP152O94986 1710 aa13.83□□□□□ -0.2
LRRFIP1-211ENST00000478958 LNPKQ9C0E8 428 aa13.83□□□□□ -0.2
LRRFIP1-211ENST00000478958 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
LRRFIP1-211ENST00000478958 ABCA6Q8N139 1617 aa13.82□□□□□ -0.2
LRRFIP1-211ENST00000478958 RTEL1-TNFRSF6BF6WH68 1400 aa13.82□□□□□ -0.2
LRRFIP1-211ENST00000478958 SRPK2P78362 688 aaKnown RBP13.81□□□□□ -0.2
LRRFIP1-211ENST00000478958 UTP14CQ5TAP6 766 aaKnown RBP13.81□□□□□ -0.2
LRRFIP1-211ENST00000478958 TMEM57Q8N5G2 664 aa13.81□□□□□ -0.2
LRRFIP1-211ENST00000478958 ARID3AQ99856 593 aa13.81□□□□□ -0.2
LRRFIP1-211ENST00000478958 CHD1O14646 1710 aa13.81□□□□□ -0.2
LRRFIP1-211ENST00000478958 TRAK2O60296 914 aa13.81□□□□□ -0.2
LRRFIP1-211ENST00000478958 FANCAO15360 1455 aa13.81□□□□□ -0.2
LRRFIP1-211ENST00000478958 MRE11P49959 708 aa13.81□□□□□ -0.2
LRRFIP1-211ENST00000478958 HSCBQ8IWL3 235 aa13.81□□□□□ -0.2
LRRFIP1-211ENST00000478958 C14orf93Q9H972 538 aaKnown RBP13.81□□□□□ -0.2
LRRFIP1-211ENST00000478958 DMTNQ08495 405 aa13.8□□□□□ -0.2
LRRFIP1-211ENST00000478958 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
LRRFIP1-211ENST00000478958 CHMP5Q9NZZ3 219 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms