RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SBNO2Q9Y2G9 1366 aa14.09□□□□□ -0.15
VPS52-217ENST00000478934 E9PSI1 815 aa14.09□□□□□ -0.15
VPS52-217ENST00000478934 PANK1Q8TE04 598 aa14.09□□□□□ -0.15
VPS52-217ENST00000478934 HECW2Q9P2P5 1572 aa14.09□□□□□ -0.15
VPS52-217ENST00000478934 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
VPS52-217ENST00000478934 RTL5Q5HYW3 569 aaPredicted RBP14.09□□□□□ -0.15
VPS52-217ENST00000478934 TCP11L2Q8N4U5 519 aa14.09□□□□□ -0.15
VPS52-217ENST00000478934 NKTRP30414 1462 aaKnown RBP14.08□□□□□ -0.16
VPS52-217ENST00000478934 BCL2L13Q9BXK5 485 aa14.08□□□□□ -0.16
VPS52-217ENST00000478934 POLR3AO14802 1390 aaPredicted RBP14.08□□□□□ -0.16
VPS52-217ENST00000478934 CYB5RLQ6IPT4 315 aa14.08□□□□□ -0.16
VPS52-217ENST00000478934 FRAT1Q92837 279 aaPredicted RBP14.08□□□□□ -0.16
VPS52-217ENST00000478934 PPLO60437 1756 aa14.07□□□□□ -0.16
VPS52-217ENST00000478934 IGHDP01880 384 aa14.07□□□□□ -0.16
VPS52-217ENST00000478934 QRICH2Q9H0J4 1663 aa14.07□□□□□ -0.16
VPS52-217ENST00000478934 VGFO15240 615 aaPredicted RBP14.07□□□□□ -0.16
VPS52-217ENST00000478934 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.07□□□□□ -0.16
VPS52-217ENST00000478934 COG6Q9Y2V7 657 aa14.07□□□□□ -0.16
VPS52-217ENST00000478934 MYO3AQ8NEV4 1616 aa14.06□□□□□ -0.16
VPS52-217ENST00000478934 CENPQQ7L2Z9 268 aaPredicted RBP14.06□□□□□ -0.16
VPS52-217ENST00000478934 RPGRIP1LQ68CZ1 1315 aa14.06□□□□□ -0.16
VPS52-217ENST00000478934 SETBP1Q9Y6X0 1596 aa14.06□□□□□ -0.16
VPS52-217ENST00000478934 GGNBP2Q9H3C7 697 aa14.06□□□□□ -0.16
VPS52-217ENST00000478934 MINK1Q8N4C8 1332 aaPredicted RBP14.05□□□□□ -0.16
VPS52-217ENST00000478934 SRPK2P78362 688 aaKnown RBP14.05□□□□□ -0.16
VPS52-217ENST00000478934 NEFMP07197 916 aa14.05□□□□□ -0.16
VPS52-217ENST00000478934 CGNL1Q0VF96 1302 aa14.04□□□□□ -0.16
VPS52-217ENST00000478934 EVC2Q86UK5 1308 aa14.04□□□□□ -0.16
VPS52-217ENST00000478934 RUNDC1Q96C34 613 aa14.04□□□□□ -0.16
VPS52-217ENST00000478934 TULP4Q9NRJ4 1543 aa14.04□□□□□ -0.16
VPS52-217ENST00000478934 U2AF1L5P0DN76 240 aaPredicted RBP14.04□□□□□ -0.16
VPS52-217ENST00000478934 U2AF1Q01081 240 aaKnown RBP eCLIP14.04□□□□□ -0.163e-7■■□□□ 12.8
VPS52-217ENST00000478934 CANXP27824 592 aaKnown RBP14.03□□□□□ -0.16
VPS52-217ENST00000478934 CAMSAP1Q5T5Y3 1602 aa14.03□□□□□ -0.16
VPS52-217ENST00000478934 GLI2P10070 1586 aa14.03□□□□□ -0.16
VPS52-217ENST00000478934 FBLN1P23142 703 aa14.03□□□□□ -0.16
VPS52-217ENST00000478934 PRAM1Q96QH2 718 aa14.02□□□□□ -0.16
VPS52-217ENST00000478934 NEXMIFQ5QGS0 1516 aa14.02□□□□□ -0.16
VPS52-217ENST00000478934 DIP2CQ9Y2E4 1556 aa14.02□□□□□ -0.16
VPS52-217ENST00000478934 C8orf34Q49A92 452 aa14.02□□□□□ -0.17
VPS52-217ENST00000478934 CLUAP1Q96AJ1 413 aa14.02□□□□□ -0.17
VPS52-217ENST00000478934 SHPRHQ149N8 1683 aa14.02□□□□□ -0.17
VPS52-217ENST00000478934 RLBP1P12271 317 aa14.01□□□□□ -0.17
VPS52-217ENST00000478934 ZC3H13Q5T200 1668 aaKnown RBP14.01□□□□□ -0.17
VPS52-217ENST00000478934 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
VPS52-217ENST00000478934 RARSP54136 660 aaKnown RBP14□□□□□ -0.17
VPS52-217ENST00000478934 A0A1W2PP64 1363 aa14□□□□□ -0.17
VPS52-217ENST00000478934 CFAP74Q9C0B2 1584 aa13.99□□□□□ -0.17
VPS52-217ENST00000478934 ANKRD36BQ8N2N9 1353 aa13.99□□□□□ -0.17
VPS52-217ENST00000478934 TSR2Q969E8 191 aaKnown RBP13.99□□□□□ -0.17
VPS52-217ENST00000478934 NEO1Q92859 1461 aa13.99□□□□□ -0.17
VPS52-217ENST00000478934 MLECQ14165 292 aa13.99□□□□□ -0.17
VPS52-217ENST00000478934 POGKQ9P215 609 aa13.99□□□□□ -0.17
VPS52-217ENST00000478934 CFAP53Q96M91 514 aa13.98□□□□□ -0.17
VPS52-217ENST00000478934 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
VPS52-217ENST00000478934 PIK3C2BO00750 1634 aa13.98□□□□□ -0.17
VPS52-217ENST00000478934 FAM69CQ0P6D2 419 aa13.97□□□□□ -0.17
VPS52-217ENST00000478934 SLC52A1Q9NWF4 448 aa13.97□□□□□ -0.17
VPS52-217ENST00000478934 FYB1O15117 783 aa13.97□□□□□ -0.17
VPS52-217ENST00000478934 FAM161AQ3B820 660 aa13.97□□□□□ -0.17
VPS52-217ENST00000478934 WAPLQ7Z5K2 1190 aa13.97□□□□□ -0.17
VPS52-217ENST00000478934 ARHGEF28Q8N1W1 1705 aaKnown RBP13.97□□□□□ -0.17
VPS52-217ENST00000478934 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
VPS52-217ENST00000478934 IQSEC2Q5JU85 1478 aa13.96□□□□□ -0.17
VPS52-217ENST00000478934 CABP1Q9NZU7 370 aa13.96□□□□□ -0.17
VPS52-217ENST00000478934 PCDHB15Q9Y5E8 787 aa13.96□□□□□ -0.17
VPS52-217ENST00000478934 PDE3AQ14432 1141 aa13.95□□□□□ -0.18
VPS52-217ENST00000478934 MYO5BQ9ULV0 1848 aa13.95□□□□□ -0.18
VPS52-217ENST00000478934 CDK19Q9BWU1 502 aa13.95□□□□□ -0.18
VPS52-217ENST00000478934 SEC24BO95487 1268 aa13.94□□□□□ -0.18
VPS52-217ENST00000478934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.94□□□□□ -0.18
VPS52-217ENST00000478934 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
VPS52-217ENST00000478934 NGEFQ8N5V2 710 aa13.94□□□□□ -0.18
VPS52-217ENST00000478934 RICTORQ6R327 1708 aa13.94□□□□□ -0.18
VPS52-217ENST00000478934 PPM1GO15355 546 aaPredicted RBP13.94□□□□□ -0.18
VPS52-217ENST00000478934 ARHGAP31Q2M1Z3 1444 aa13.93□□□□□ -0.18
VPS52-217ENST00000478934 PTPRMP28827 1452 aa13.93□□□□□ -0.18
VPS52-217ENST00000478934 PLEKHF1Q96S99 279 aa13.93□□□□□ -0.18
VPS52-217ENST00000478934 TRIM35Q9UPQ4 493 aa13.92□□□□□ -0.18
VPS52-217ENST00000478934 YTHDC2Q9H6S0 1430 aaKnown RBP13.92□□□□□ -0.18
VPS52-217ENST00000478934 ABCC11Q96J66 1382 aa13.92□□□□□ -0.18
VPS52-217ENST00000478934 EXOSC9Q06265 439 aaKnown RBP13.92□□□□□ -0.18
VPS52-217ENST00000478934 TMPOP42166 694 aaKnown RBP13.91□□□□□ -0.18
VPS52-217ENST00000478934 PUS7Q96PZ0 661 aaKnown RBP13.91□□□□□ -0.18
VPS52-217ENST00000478934 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
VPS52-217ENST00000478934 DAXXQ9UER7 740 aaPredicted RBP13.91□□□□□ -0.18
VPS52-217ENST00000478934 CD163L1Q9NR16 1453 aa13.91□□□□□ -0.18
VPS52-217ENST00000478934 IL27Q8NEV9 243 aa13.91□□□□□ -0.18
VPS52-217ENST00000478934 DDRGK1Q96HY6 314 aa13.91□□□□□ -0.18
VPS52-217ENST00000478934 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.18
VPS52-217ENST00000478934 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.18
VPS52-217ENST00000478934 CCDC27Q2M243 656 aa13.9□□□□□ -0.18
VPS52-217ENST00000478934 TERF2IPQ9NYB0 399 aa13.9□□□□□ -0.18
VPS52-217ENST00000478934 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
VPS52-217ENST00000478934 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
VPS52-217ENST00000478934 ZFYVE9O95405 1425 aa13.89□□□□□ -0.19
VPS52-217ENST00000478934 USP32Q8NFA0 1604 aa13.88□□□□□ -0.19
VPS52-217ENST00000478934 PREX1Q8TCU6 1659 aa13.88□□□□□ -0.19
VPS52-217ENST00000478934 RIPK4P57078 832 aa13.88□□□□□ -0.19
VPS52-217ENST00000478934 NFKBIBQ15653 356 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms