RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 MBD5Q9P267 1494 aa14.11□□□□□ -0.15
GFM1-207ENST00000478254 C9orf84Q5VXU9 1444 aa14.11□□□□□ -0.15
GFM1-207ENST00000478254 TRIM27P14373 513 aa14.11□□□□□ -0.15
GFM1-207ENST00000478254 RBSNQ9H1K0 784 aa14.11□□□□□ -0.15
GFM1-207ENST00000478254 SPDYE4A6NLX3 237 aa14.11□□□□□ -0.15
GFM1-207ENST00000478254 PKP1Q13835 747 aa14.11□□□□□ -0.15
GFM1-207ENST00000478254 SSH1Q8WYL5 1049 aa14.11□□□□□ -0.15
GFM1-207ENST00000478254 PRAG1Q86YV5 1406 aa14.1□□□□□ -0.15
GFM1-207ENST00000478254 C17orf53Q8N3J3 647 aaPredicted RBP14.1□□□□□ -0.15
GFM1-207ENST00000478254 CTTNBP2Q8WZ74 1663 aa14.1□□□□□ -0.15
GFM1-207ENST00000478254 RAB3GAP1Q15042 981 aa14.09□□□□□ -0.15
GFM1-207ENST00000478254 TRMT2AQ8IZ69 625 aaKnown RBP14.09□□□□□ -0.15
GFM1-207ENST00000478254 DDX19BQ9UMR2 479 aa14.09□□□□□ -0.15
GFM1-207ENST00000478254 ZSCAN23Q3MJ62 389 aa14.09□□□□□ -0.15
GFM1-207ENST00000478254 UHRF1BP1Q6BDS2 1440 aa14.08□□□□□ -0.15
GFM1-207ENST00000478254 CARD14Q9BXL6 1004 aa14.08□□□□□ -0.16
GFM1-207ENST00000478254 MAGI2Q86UL8 1455 aa14.08□□□□□ -0.16
GFM1-207ENST00000478254 CHD1LQ86WJ1 897 aa14.07□□□□□ -0.16
GFM1-207ENST00000478254 GDPD2Q9HCC8 539 aa14.07□□□□□ -0.16
GFM1-207ENST00000478254 TBC1D9Q6ZT07 1266 aa14.06□□□□□ -0.16
GFM1-207ENST00000478254 ISY1Q9ULR0 285 aaKnown RBP14.06□□□□□ -0.16
GFM1-207ENST00000478254 ATF7IPQ6VMQ6 1270 aa14.06□□□□□ -0.16
GFM1-207ENST00000478254 DTNBO60941 627 aa14.05□□□□□ -0.16
GFM1-207ENST00000478254 ZGPATQ8N5A5 531 aaKnown RBP14.05□□□□□ -0.16
GFM1-207ENST00000478254 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
GFM1-207ENST00000478254 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
GFM1-207ENST00000478254 KIAA2012Q0VF49 1180 aa14.05□□□□□ -0.16
GFM1-207ENST00000478254 TMEM132EQ6IEE7 984 aa14.05□□□□□ -0.16
GFM1-207ENST00000478254 COL17A1Q9UMD9 1497 aaPredicted RBP14.04□□□□□ -0.16
GFM1-207ENST00000478254 PLB1Q6P1J6 1458 aa14.04□□□□□ -0.16
GFM1-207ENST00000478254 KLHL40Q2TBA0 621 aa14.04□□□□□ -0.16
GFM1-207ENST00000478254 SMC5Q8IY18 1101 aa14.04□□□□□ -0.16
GFM1-207ENST00000478254 SLC24A1O60721 1099 aa14.03□□□□□ -0.16
GFM1-207ENST00000478254 THUMPD2Q9BTF0 503 aaKnown RBP14.03□□□□□ -0.16
GFM1-207ENST00000478254 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
GFM1-207ENST00000478254 PTMSP20962 102 aa14.03□□□□□ -0.16
GFM1-207ENST00000478254 MAP7D2Q96T17 732 aa14.03□□□□□ -0.16
GFM1-207ENST00000478254 GPATCH8Q9UKJ3 1502 aaKnown RBP14.03□□□□□ -0.16
GFM1-207ENST00000478254 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
GFM1-207ENST00000478254 TROQ12816 1431 aaPredicted RBP14.02□□□□□ -0.16
GFM1-207ENST00000478254 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.16
GFM1-207ENST00000478254 CUL7Q14999 1698 aa14.02□□□□□ -0.16
GFM1-207ENST00000478254 IPO8O15397 1037 aaKnown RBP14.02□□□□□ -0.17
GFM1-207ENST00000478254 CHMP3Q9Y3E7 222 aa14.02□□□□□ -0.17
GFM1-207ENST00000478254 POLR1AO95602 1720 aaPredicted RBP14.02□□□□□ -0.17
GFM1-207ENST00000478254 DNMT1P26358 1616 aaKnown RBP14.02□□□□□ -0.17
GFM1-207ENST00000478254 STK26Q9P289 416 aa14.02□□□□□ -0.17
GFM1-207ENST00000478254 PRDM4Q9UKN5 801 aa14.02□□□□□ -0.17
GFM1-207ENST00000478254 GGNBP2Q9H3C7 697 aa14.01□□□□□ -0.17
GFM1-207ENST00000478254 TTC12Q9H892 705 aaPredicted RBP14.01□□□□□ -0.17
GFM1-207ENST00000478254 NLRP1Q9C000 1473 aa14.01□□□□□ -0.17
GFM1-207ENST00000478254 KIF16BQ96L93 1317 aa14.01□□□□□ -0.17
GFM1-207ENST00000478254 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
GFM1-207ENST00000478254 CSPP1Q1MSJ5 1256 aa14□□□□□ -0.17
GFM1-207ENST00000478254 C16orf71Q8IYS4 520 aaPredicted RBP14□□□□□ -0.17
GFM1-207ENST00000478254 JPH4Q96JJ6 628 aa14□□□□□ -0.17
GFM1-207ENST00000478254 CCDC39Q9UFE4 941 aa14□□□□□ -0.17
GFM1-207ENST00000478254 ZKSCAN5Q9Y2L8 839 aa14□□□□□ -0.17
GFM1-207ENST00000478254 KIF21AQ7Z4S6 1674 aa14□□□□□ -0.17
GFM1-207ENST00000478254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
GFM1-207ENST00000478254 SPC24Q8NBT2 197 aa14□□□□□ -0.17
GFM1-207ENST00000478254 PPP1R9BQ96SB3 815 aa14□□□□□ -0.17
GFM1-207ENST00000478254 SAMD9Q5K651 1589 aa14□□□□□ -0.17
GFM1-207ENST00000478254 SASS6Q6UVJ0 657 aa13.99□□□□□ -0.17
GFM1-207ENST00000478254 ZNF771Q7L3S4 317 aaPredicted RBP13.99□□□□□ -0.17
GFM1-207ENST00000478254 BBXQ8WY36 941 aaPredicted RBP13.99□□□□□ -0.17
GFM1-207ENST00000478254 NSFL1CQ9UNZ2 370 aaKnown RBP13.99□□□□□ -0.17
GFM1-207ENST00000478254 NOL7Q9UMY1 257 aaKnown RBP13.99□□□□□ -0.17
GFM1-207ENST00000478254 NUP153P49790 1475 aaKnown RBP13.99□□□□□ -0.17
GFM1-207ENST00000478254 SMARCA5O60264 1052 aaPredicted RBP13.99□□□□□ -0.17
GFM1-207ENST00000478254 FBLN1P23142 703 aa13.99□□□□□ -0.17
GFM1-207ENST00000478254 NUCB2P80303 420 aa13.99□□□□□ -0.17
GFM1-207ENST00000478254 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
GFM1-207ENST00000478254 GPRASP1Q5JY77 1395 aa13.98□□□□□ -0.17
GFM1-207ENST00000478254 WDR63Q8IWG1 891 aa13.98□□□□□ -0.17
GFM1-207ENST00000478254 ZNF608Q9ULD9 1512 aaPredicted RBP13.98□□□□□ -0.17
GFM1-207ENST00000478254 A2MP01023 1474 aa13.98□□□□□ -0.17
GFM1-207ENST00000478254 AAMPQ13685 434 aa13.98□□□□□ -0.17
GFM1-207ENST00000478254 SNX21Q969T3 373 aa13.98□□□□□ -0.17
GFM1-207ENST00000478254 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
GFM1-207ENST00000478254 VGLL3A8MV65 326 aa13.97□□□□□ -0.17
GFM1-207ENST00000478254 ST18O60284 1047 aa13.97□□□□□ -0.17
GFM1-207ENST00000478254 NEK4P51957 841 aa13.97□□□□□ -0.17
GFM1-207ENST00000478254 LARP6Q9BRS8 491 aaKnown RBP13.97□□□□□ -0.17
GFM1-207ENST00000478254 CDC45O75419 566 aa13.97□□□□□ -0.17
GFM1-207ENST00000478254 HMOX1P09601 288 aa13.97□□□□□ -0.17
GFM1-207ENST00000478254 RBM25P49756 843 aaKnown RBP13.97□□□□□ -0.17
GFM1-207ENST00000478254 NUCB1Q02818 461 aa13.97□□□□□ -0.17
GFM1-207ENST00000478254 TMEM63CQ9P1W3 806 aa13.97□□□□□ -0.17
GFM1-207ENST00000478254 INSRP06213 1382 aa13.97□□□□□ -0.17
GFM1-207ENST00000478254 DYNC1I1O14576 645 aa13.96□□□□□ -0.17
GFM1-207ENST00000478254 CDK11BP21127 795 aaKnown RBP13.96□□□□□ -0.17
GFM1-207ENST00000478254 SRPK2P78362 688 aaKnown RBP13.96□□□□□ -0.17
GFM1-207ENST00000478254 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.96□□□□□ -0.17
GFM1-207ENST00000478254 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.17
GFM1-207ENST00000478254 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.17
GFM1-207ENST00000478254 LMBRD1Q9NUN5 540 aa13.96□□□□□ -0.18
GFM1-207ENST00000478254 IQGAP2Q13576 1575 aa13.96□□□□□ -0.18
GFM1-207ENST00000478254 CASC1Q6TDU7 716 aa13.95□□□□□ -0.18
GFM1-207ENST00000478254 GPT2Q8TD30 523 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms