RNA–Protein interactions for RNA: ENST00000477607.6

P4HB-211, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 1 (best)

Gene P4HB, Length 1,110 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-211ENST00000477607 PXDNQ92626 1479 aa23.39■■□□□ 1.34
P4HB-211ENST00000477607 FNBP4Q8N3X1 1017 aaPredicted RBP23.39■■□□□ 1.33
P4HB-211ENST00000477607 EP400Q96L91 3159 aa23.38■■□□□ 1.33
P4HB-211ENST00000477607 PPARGC1BQ86YN6 1023 aaKnown RBP23.38■■□□□ 1.33
P4HB-211ENST00000477607 NAIPQ13075 1403 aa23.37■■□□□ 1.33
P4HB-211ENST00000477607 VGFO15240 615 aaPredicted RBP23.37■■□□□ 1.33
P4HB-211ENST00000477607 SRCAPQ6ZRS2 3230 aa23.35■■□□□ 1.33
P4HB-211ENST00000477607 BCL9LQ86UU0 1499 aa23.35■■□□□ 1.33
P4HB-211ENST00000477607 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.33
P4HB-211ENST00000477607 BRWD3Q6RI45 1802 aa23.33■■□□□ 1.32
P4HB-211ENST00000477607 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.32
P4HB-211ENST00000477607 IFT172Q9UG01 1749 aa23.33■■□□□ 1.32
P4HB-211ENST00000477607 FMN2Q9NZ56 1722 aa23.31■■□□□ 1.32
P4HB-211ENST00000477607 ESCO1Q5FWF5 840 aa23.31■■□□□ 1.32
P4HB-211ENST00000477607 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
P4HB-211ENST00000477607 GLI3P10071 1580 aa23.31■■□□□ 1.32
P4HB-211ENST00000477607 RPGRIP1LQ68CZ1 1315 aa23.31■■□□□ 1.32
P4HB-211ENST00000477607 KIF1AQ12756 1690 aa23.29■■□□□ 1.32
P4HB-211ENST00000477607 XPCQ01831 940 aaPredicted RBP23.29■■□□□ 1.32
P4HB-211ENST00000477607 FOXD1Q16676 465 aa23.29■■□□□ 1.32
P4HB-211ENST00000477607 RRBP1Q9P2E9 1410 aaKnown RBP23.29■■□□□ 1.32
P4HB-211ENST00000477607 USP32Q8NFA0 1604 aa23.28■■□□□ 1.32
P4HB-211ENST00000477607 RGPD8O14715 1765 aaPredicted RBP23.27■■□□□ 1.32
P4HB-211ENST00000477607 FOXO3O43524 673 aa23.26■■□□□ 1.31
P4HB-211ENST00000477607 GJD4Q96KN9 370 aaPredicted RBP23.25■■□□□ 1.31
P4HB-211ENST00000477607 PLCH1Q4KWH8 1693 aa23.25■■□□□ 1.31
P4HB-211ENST00000477607 TECPR2O15040 1411 aa23.25■■□□□ 1.31
P4HB-211ENST00000477607 CCDC125Q86Z20 511 aa23.24■■□□□ 1.31
P4HB-211ENST00000477607 ABCA3Q99758 1704 aa23.24■■□□□ 1.31
P4HB-211ENST00000477607 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
P4HB-211ENST00000477607 SLIT2O94813 1529 aa23.23■■□□□ 1.31
P4HB-211ENST00000477607 NUTM2FA1L443 756 aa23.23■■□□□ 1.31
P4HB-211ENST00000477607 LRPPRCP42704 1394 aaKnown RBP23.23■■□□□ 1.31
P4HB-211ENST00000477607 SLC4A1APQ9BWU0 796 aaKnown RBP23.21■■□□□ 1.31
P4HB-211ENST00000477607 NWD2Q9ULI1 1742 aa23.2■■□□□ 1.3
P4HB-211ENST00000477607 BLMP54132 1417 aaPredicted RBP23.2■■□□□ 1.3
P4HB-211ENST00000477607 ADGRF5Q8IZF2 1346 aa23.2■■□□□ 1.3
P4HB-211ENST00000477607 PLEKHH1Q9ULM0 1364 aa23.19■■□□□ 1.3
P4HB-211ENST00000477607 STK26Q9P289 416 aa23.19■■□□□ 1.3
P4HB-211ENST00000477607 CCDC144AA2RUR9 1427 aa23.18■■□□□ 1.3
P4HB-211ENST00000477607 WAPLQ7Z5K2 1190 aa23.18■■□□□ 1.3
P4HB-211ENST00000477607 UNC5CLQ8IV45 518 aa23.17■■□□□ 1.3
P4HB-211ENST00000477607 SPATA31A3Q5VYP0 1347 aa23.16■■□□□ 1.3
P4HB-211ENST00000477607 SPATA31E1Q6ZUB1 1445 aa23.15■■□□□ 1.3
P4HB-211ENST00000477607 LRP5O75197 1615 aa23.15■■□□□ 1.3
P4HB-211ENST00000477607 PIK3C2GO75747 1445 aa23.14■■□□□ 1.29
P4HB-211ENST00000477607 ABCC11Q96J66 1382 aa23.14■■□□□ 1.29
P4HB-211ENST00000477607 TNS3Q68CZ2 1445 aa23.13■■□□□ 1.29
P4HB-211ENST00000477607 ANKRD30BQ9BXX2 1392 aa23.12■■□□□ 1.29
P4HB-211ENST00000477607 YTHDC2Q9H6S0 1430 aaKnown RBP23.11■■□□□ 1.29
P4HB-211ENST00000477607 RGL3Q3MIN7 710 aa23.11■■□□□ 1.29
P4HB-211ENST00000477607 TMEM132EQ6IEE7 984 aa23.11■■□□□ 1.29
P4HB-211ENST00000477607 DEFB132Q7Z7B7 95 aa23.11■■□□□ 1.29
P4HB-211ENST00000477607 NRAPQ86VF7 1730 aa23.11■■□□□ 1.29
P4HB-211ENST00000477607 KRT28Q7Z3Y7 464 aa23.09■■□□□ 1.29
P4HB-211ENST00000477607 HAP1P54257 671 aaPredicted RBP23.07■■□□□ 1.28
P4HB-211ENST00000477607 SEPT12Q8IYM1 358 aa23.07■■□□□ 1.28
P4HB-211ENST00000477607 NRXN1Q9ULB1 1477 aa23.06■■□□□ 1.28
P4HB-211ENST00000477607 SF3B2Q13435 895 aaKnown RBP23.06■■□□□ 1.28
P4HB-211ENST00000477607 PLEKHG5O94827 1062 aa23.05■■□□□ 1.28
P4HB-211ENST00000477607 VPS72Q15906 364 aa23.05■■□□□ 1.28
P4HB-211ENST00000477607 CABLES1Q8TDN4 633 aa23.05■■□□□ 1.28
P4HB-211ENST00000477607 TRPM3Q9HCF6 1732 aaPredicted RBP23.05■■□□□ 1.28
P4HB-211ENST00000477607 PHF8Q9UPP1 1060 aa23.04■■□□□ 1.28
P4HB-211ENST00000477607 CCDC9Q9Y3X0 531 aaKnown RBP23.03■■□□□ 1.28
P4HB-211ENST00000477607 RGPD1P0DJD0 1748 aa23.02■■□□□ 1.28
P4HB-211ENST00000477607 SBNO1A3KN83 1393 aa23.01■■□□□ 1.27
P4HB-211ENST00000477607 ALS2Q96Q42 1657 aa23.01■■□□□ 1.27
P4HB-211ENST00000477607 PSME1Q06323 249 aa23■■□□□ 1.27
P4HB-211ENST00000477607 KRT27Q7Z3Y8 459 aa23■■□□□ 1.27
P4HB-211ENST00000477607 ADGRB2O60241 1585 aa23■■□□□ 1.27
P4HB-211ENST00000477607 ARHGEF10O15013 1369 aa23■■□□□ 1.27
P4HB-211ENST00000477607 CRYBG1Q9Y4K1 1723 aa22.99■■□□□ 1.27
P4HB-211ENST00000477607 COL14A1Q05707 1796 aaKnown RBP22.99■■□□□ 1.27
P4HB-211ENST00000477607 LMOD2Q6P5Q4 547 aa22.99■■□□□ 1.27
P4HB-211ENST00000477607 TNS1Q9HBL0 1735 aaKnown RBP22.97■■□□□ 1.27
P4HB-211ENST00000477607 ONECUT3O60422 494 aaPredicted RBP22.97■■□□□ 1.27
P4HB-211ENST00000477607 SIRT1Q96EB6 747 aa22.97■■□□□ 1.27
P4HB-211ENST00000477607 A0A0G2JS52 829 aa22.96■■□□□ 1.27
P4HB-211ENST00000477607 MYT1Q01538 1121 aa22.96■■□□□ 1.27
P4HB-211ENST00000477607 SAFB2Q14151 953 aaKnown RBP eCLIP22.95■■□□□ 1.26
P4HB-211ENST00000477607 DLC1Q96QB1 1528 aa22.95■■□□□ 1.26
P4HB-211ENST00000477607 MPHOSPH9Q99550 1183 aa22.95■■□□□ 1.26
P4HB-211ENST00000477607 ANKARQ7Z5J8 1434 aa22.94■■□□□ 1.26
P4HB-211ENST00000477607 DHX57Q6P158 1386 aaKnown RBP22.94■■□□□ 1.26
P4HB-211ENST00000477607 PSDA5PKW4 1024 aaPredicted RBP22.94■■□□□ 1.26
P4HB-211ENST00000477607 C14orf93Q9H972 538 aaKnown RBP22.94■■□□□ 1.26
P4HB-211ENST00000477607 THSD7AQ9UPZ6 1657 aa22.93■■□□□ 1.26
P4HB-211ENST00000477607 FAM83GA6ND36 823 aa22.93■■□□□ 1.26
P4HB-211ENST00000477607 BAG6P46379 1132 aa22.93■■□□□ 1.26
P4HB-211ENST00000477607 PRAM1Q96QH2 718 aa22.93■■□□□ 1.26
P4HB-211ENST00000477607 CFAP70Q5T0N1 1121 aa22.92■■□□□ 1.26
P4HB-211ENST00000477607 FAM98CQ17RN3 349 aaKnown RBP22.91■■□□□ 1.26
P4HB-211ENST00000477607 PMFBP1Q8TBY8 1022 aa22.91■■□□□ 1.26
P4HB-211ENST00000477607 BTG4Q9NY30 223 aa22.89■■□□□ 1.25
P4HB-211ENST00000477607 ADGRB1O14514 1584 aa22.89■■□□□ 1.25
P4HB-211ENST00000477607 HRCP23327 699 aa22.88■■□□□ 1.25
P4HB-211ENST00000477607 ITSN1Q15811 1721 aa22.88■■□□□ 1.25
P4HB-211ENST00000477607 TULP4Q9NRJ4 1543 aa22.87■■□□□ 1.25
P4HB-211ENST00000477607 PHRF1Q9P1Y6 1649 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms