RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 AMOTL2Q9Y2J4 779 aa13.09□□□□□ -0.31
PGK1-204ENST00000477335 STRCP1A6NGW2 1772 aa13.09□□□□□ -0.31
PGK1-204ENST00000477335 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.31
PGK1-204ENST00000477335 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
PGK1-204ENST00000477335 KCNA6P17658 529 aa13.08□□□□□ -0.32
PGK1-204ENST00000477335 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
PGK1-204ENST00000477335 PTCH1Q13635 1447 aa13.07□□□□□ -0.32
PGK1-204ENST00000477335 SAFB2Q14151 953 aaKnown RBP eCLIP13.07□□□□□ -0.32
PGK1-204ENST00000477335 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
PGK1-204ENST00000477335 EIF3AQ14152 1382 aaKnown RBP13.07□□□□□ -0.32
PGK1-204ENST00000477335 FAM135BQ49AJ0 1406 aa13.06□□□□□ -0.32
PGK1-204ENST00000477335 TULP4Q9NRJ4 1543 aa13.06□□□□□ -0.32
PGK1-204ENST00000477335 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
PGK1-204ENST00000477335 SIRT1Q96EB6 747 aa13.05□□□□□ -0.32
PGK1-204ENST00000477335 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
PGK1-204ENST00000477335 SBNO2Q9Y2G9 1366 aa13.05□□□□□ -0.32
PGK1-204ENST00000477335 RBM33Q96EV2 1170 aaKnown RBP13.04□□□□□ -0.32
PGK1-204ENST00000477335 KIF7Q2M1P5 1343 aa13.04□□□□□ -0.32
PGK1-204ENST00000477335 ZNF335Q9H4Z2 1342 aaPredicted RBP13.04□□□□□ -0.32
PGK1-204ENST00000477335 MINK1Q8N4C8 1332 aaPredicted RBP13.03□□□□□ -0.32
PGK1-204ENST00000477335 CCDC7Q96M83 1385 aa13.03□□□□□ -0.32
PGK1-204ENST00000477335 POGKQ9P215 609 aa13.02□□□□□ -0.33
PGK1-204ENST00000477335 NKTRP30414 1462 aaKnown RBP13.01□□□□□ -0.33
PGK1-204ENST00000477335 NALCNQ8IZF0 1738 aa13□□□□□ -0.33
PGK1-204ENST00000477335 ADGRB2O60241 1585 aa13□□□□□ -0.33
PGK1-204ENST00000477335 ZBTB22O15209 634 aa12.99□□□□□ -0.33
PGK1-204ENST00000477335 TMF1P82094 1093 aa12.98□□□□□ -0.33
PGK1-204ENST00000477335 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
PGK1-204ENST00000477335 TMEM94Q12767 1356 aa12.97□□□□□ -0.33
PGK1-204ENST00000477335 MYOM1P52179 1685 aa12.97□□□□□ -0.33
PGK1-204ENST00000477335 CABP2Q9NPB3 220 aa12.97□□□□□ -0.33
PGK1-204ENST00000477335 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
PGK1-204ENST00000477335 XIRP1Q702N8 1843 aaKnown RBP12.97□□□□□ -0.33
PGK1-204ENST00000477335 ADGRL3Q9HAR2 1447 aa12.96□□□□□ -0.33
PGK1-204ENST00000477335 PROSER2Q86WR7 435 aaPredicted RBP12.96□□□□□ -0.33
PGK1-204ENST00000477335 CDK19Q9BWU1 502 aa12.96□□□□□ -0.33
PGK1-204ENST00000477335 EVC2Q86UK5 1308 aa12.95□□□□□ -0.34
PGK1-204ENST00000477335 PRR36Q9H6K5 1346 aa12.95□□□□□ -0.34
PGK1-204ENST00000477335 WASLO00401 505 aaPredicted RBP12.95□□□□□ -0.34
PGK1-204ENST00000477335 POLR3GLQ9BT43 218 aa12.95□□□□□ -0.34
PGK1-204ENST00000477335 USP32Q8NFA0 1604 aa12.95□□□□□ -0.34
PGK1-204ENST00000477335 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
PGK1-204ENST00000477335 ATP7BP35670 1465 aa12.93□□□□□ -0.34
PGK1-204ENST00000477335 DDX10Q13206 875 aaKnown RBP12.93□□□□□ -0.34
PGK1-204ENST00000477335 FMN2Q9NZ56 1722 aa12.93□□□□□ -0.34
PGK1-204ENST00000477335 NUTM2FA1L443 756 aa12.91□□□□□ -0.34
PGK1-204ENST00000477335 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
PGK1-204ENST00000477335 TOPAZ1Q8N9V7 1692 aa12.91□□□□□ -0.34
PGK1-204ENST00000477335 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
PGK1-204ENST00000477335 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
PGK1-204ENST00000477335 PUS7Q96PZ0 661 aaKnown RBP12.9□□□□□ -0.34
PGK1-204ENST00000477335 SLC12A5Q9H2X9 1139 aa12.9□□□□□ -0.34
PGK1-204ENST00000477335 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
PGK1-204ENST00000477335 CDCA8Q53HL2 280 aa12.89□□□□□ -0.35
PGK1-204ENST00000477335 NUDT16Q96DE0 195 aaKnown RBP12.89□□□□□ -0.35
PGK1-204ENST00000477335 C14orf37Q86TY3 774 aa12.88□□□□□ -0.35
PGK1-204ENST00000477335 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
PGK1-204ENST00000477335 ATAD2Q6PL18 1390 aa12.88□□□□□ -0.35
PGK1-204ENST00000477335 MST1RQ04912 1400 aa12.88□□□□□ -0.35
PGK1-204ENST00000477335 ANKARQ7Z5J8 1434 aa12.88□□□□□ -0.35
PGK1-204ENST00000477335 RGPD8O14715 1765 aaPredicted RBP12.87□□□□□ -0.35
PGK1-204ENST00000477335 DCCP43146 1447 aa12.87□□□□□ -0.35
PGK1-204ENST00000477335 PPIP5K1Q6PFW1 1433 aa12.87□□□□□ -0.35
PGK1-204ENST00000477335 TMC1Q8TDI8 760 aa12.86□□□□□ -0.35
PGK1-204ENST00000477335 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
PGK1-204ENST00000477335 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
PGK1-204ENST00000477335 PANK3Q9H999 370 aa12.86□□□□□ -0.35
PGK1-204ENST00000477335 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
PGK1-204ENST00000477335 CABP1Q9NZU7 370 aa12.86□□□□□ -0.35
PGK1-204ENST00000477335 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
PGK1-204ENST00000477335 C1orf167Q5SNV9 1468 aa12.85□□□□□ -0.35
PGK1-204ENST00000477335 MSH6P52701 1360 aa12.85□□□□□ -0.35
PGK1-204ENST00000477335 A0A1W2PP64 1363 aa12.84□□□□□ -0.35
PGK1-204ENST00000477335 PER1O15534 1290 aaPredicted RBP12.84□□□□□ -0.35
PGK1-204ENST00000477335 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
PGK1-204ENST00000477335 CPSF1Q10570 1443 aaKnown RBP12.84□□□□□ -0.35
PGK1-204ENST00000477335 ANKRD36BQ8N2N9 1353 aa12.83□□□□□ -0.36
PGK1-204ENST00000477335 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.36
PGK1-204ENST00000477335 DIEXFQ68CQ4 756 aaKnown RBP12.83□□□□□ -0.36
PGK1-204ENST00000477335 ORAI2Q96SN7 254 aa12.83□□□□□ -0.36
PGK1-204ENST00000477335 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
PGK1-204ENST00000477335 PMFBP1Q8TBY8 1022 aa12.82□□□□□ -0.36
PGK1-204ENST00000477335 ITSN1Q15811 1721 aa12.82□□□□□ -0.36
PGK1-204ENST00000477335 NSD3Q9BZ95 1437 aa12.81□□□□□ -0.36
PGK1-204ENST00000477335 ATF3P18847 181 aa12.81□□□□□ -0.36
PGK1-204ENST00000477335 ACEP12821 1306 aa12.81□□□□□ -0.36
PGK1-204ENST00000477335 AKAP12Q02952 1782 aa12.81□□□□□ -0.36
PGK1-204ENST00000477335 POLR3AO14802 1390 aaPredicted RBP12.81□□□□□ -0.36
PGK1-204ENST00000477335 MON2Q7Z3U7 1717 aa12.8□□□□□ -0.36
PGK1-204ENST00000477335 CADPS2Q86UW7 1296 aa12.8□□□□□ -0.36
PGK1-204ENST00000477335 NRKQ7Z2Y5 1582 aa12.8□□□□□ -0.36
PGK1-204ENST00000477335 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
PGK1-204ENST00000477335 ESCO1Q5FWF5 840 aa12.79□□□□□ -0.36
PGK1-204ENST00000477335 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
PGK1-204ENST00000477335 AMER1Q5JTC6 1135 aaPredicted RBP12.78□□□□□ -0.36
PGK1-204ENST00000477335 DDX17Q92841 729 aaKnown RBP12.78□□□□□ -0.36
PGK1-204ENST00000477335 USP6P35125 1406 aa12.78□□□□□ -0.36
PGK1-204ENST00000477335 BRINP3Q76B58 766 aa12.77□□□□□ -0.37
PGK1-204ENST00000477335 SLAIN2Q9P270 581 aa12.77□□□□□ -0.37
PGK1-204ENST00000477335 KTN1Q86UP2 1357 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms