RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 NOL8Q76FK4 1167 aaKnown RBP4.08□□□□□ -1.76
HMGN4-202ENST00000477243 PRDM6Q9NQX0 595 aa4.08□□□□□ -1.76
HMGN4-202ENST00000477243 PPP1R1BQ9UD71 204 aaPredicted RBP4.08□□□□□ -1.76
HMGN4-202ENST00000477243 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.08□□□□□ -1.76
HMGN4-202ENST00000477243 PALM3A6NDB9 673 aaPredicted RBP4.07□□□□□ -1.76
HMGN4-202ENST00000477243 COL9A1P20849 921 aa4.07□□□□□ -1.76
HMGN4-202ENST00000477243 APLP1P51693 650 aa4.07□□□□□ -1.76
HMGN4-202ENST00000477243 GOLGA2Q08379 1002 aa4.07□□□□□ -1.76
HMGN4-202ENST00000477243 TUSC1Q2TAM9 212 aa4.07□□□□□ -1.76
HMGN4-202ENST00000477243 DNAJC14Q6Y2X3 702 aaPredicted RBP4.07□□□□□ -1.76
HMGN4-202ENST00000477243 NOP9Q86U38 636 aaKnown RBP4.07□□□□□ -1.76
HMGN4-202ENST00000477243 MS4A4AQ96JQ5 239 aa4.07□□□□□ -1.76
HMGN4-202ENST00000477243 FAM217BQ9NTX9 383 aaPredicted RBP4.07□□□□□ -1.76
HMGN4-202ENST00000477243 BAZ1BQ9UIG0 1483 aaKnown RBP4.06□□□□□ -1.76
HMGN4-202ENST00000477243 YEATS2Q9ULM3 1422 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 CARNS1A5YM72 827 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 PLEKHD1A6NEE1 506 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 KDM4AO75164 1064 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 RGS20O76081 388 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 FOXK1P85037 733 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 FOXK2Q01167 660 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 MAP3K11Q16584 847 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 TICAM2Q86XR7 235 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 GIPC2Q8TF65 315 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 ZNF592Q92610 1267 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 TBC1D2BQ9UPU7 963 aa4.06□□□□□ -1.76
HMGN4-202ENST00000477243 CDK12Q9NYV4 1490 aaPredicted RBP4.05□□□□□ -1.76
HMGN4-202ENST00000477243 TOM1O60784 492 aa4.05□□□□□ -1.76
HMGN4-202ENST00000477243 SOX11P35716 441 aa4.05□□□□□ -1.76
HMGN4-202ENST00000477243 DSG2Q14126 1118 aa4.05□□□□□ -1.76
HMGN4-202ENST00000477243 ELOAQ14241 798 aaKnown RBP4.05□□□□□ -1.76
HMGN4-202ENST00000477243 NAALADL2Q58DX5 795 aa4.05□□□□□ -1.76
HMGN4-202ENST00000477243 JMYQ8N9B5 988 aa4.05□□□□□ -1.76
HMGN4-202ENST00000477243 TBC1D2Q9BYX2 928 aa4.05□□□□□ -1.76
HMGN4-202ENST00000477243 NDUFB9Q9Y6M9 179 aa4.05□□□□□ -1.76
HMGN4-202ENST00000477243 CFAP43Q8NDM7 1665 aa4.05□□□□□ -1.76
HMGN4-202ENST00000477243 MARCH6O60337 910 aa4.04□□□□□ -1.76
HMGN4-202ENST00000477243 OATP04181 439 aa4.04□□□□□ -1.76
HMGN4-202ENST00000477243 MARSP56192 900 aaKnown RBP4.04□□□□□ -1.76
HMGN4-202ENST00000477243 RIC3Q7Z5B4 369 aa4.04□□□□□ -1.76
HMGN4-202ENST00000477243 IFNL1Q8IU54 200 aa4.04□□□□□ -1.76
HMGN4-202ENST00000477243 ZNF710Q8N1W2 664 aa4.04□□□□□ -1.76
HMGN4-202ENST00000477243 TMC2Q8TDI7 906 aa4.04□□□□□ -1.76
HMGN4-202ENST00000477243 L3MBTL3Q96JM7 780 aaPredicted RBP4.04□□□□□ -1.76
HMGN4-202ENST00000477243 MYH16Q9H6N6 1097 aa4.04□□□□□ -1.76
HMGN4-202ENST00000477243 TFIP11Q9UBB9 837 aaKnown RBP4.04□□□□□ -1.76
HMGN4-202ENST00000477243 SMARCA2P51531 1590 aa4.04□□□□□ -1.76
HMGN4-202ENST00000477243 FAM69CQ0P6D2 419 aa4.03□□□□□ -1.76
HMGN4-202ENST00000477243 ADAMTS19Q8TE59 1207 aa4.03□□□□□ -1.76
HMGN4-202ENST00000477243 AKT1S1Q96B36 256 aa4.03□□□□□ -1.76
HMGN4-202ENST00000477243 METTL14Q9HCE5 456 aaKnown RBP4.03□□□□□ -1.76
HMGN4-202ENST00000477243 TMA7Q9Y2S6 64 aaKnown RBP4.03□□□□□ -1.76
HMGN4-202ENST00000477243 CCDC61Q9Y6R9 512 aa4.03□□□□□ -1.76
HMGN4-202ENST00000477243 A0A0C4DFX4 3053 aa4.02□□□□□ -1.77
HMGN4-202ENST00000477243 HMGB1P1B2RPK0 211 aaPredicted RBP4.02□□□□□ -1.77
HMGN4-202ENST00000477243 AP1G2O75843 785 aa4.02□□□□□ -1.77
HMGN4-202ENST00000477243 CCDC181Q5TID7 509 aa4.02□□□□□ -1.77
HMGN4-202ENST00000477243 DPH6Q7L8W6 267 aa4.02□□□□□ -1.77
HMGN4-202ENST00000477243 ALG2Q9H553 416 aa4.02□□□□□ -1.77
HMGN4-202ENST00000477243 ATRXP46100 2492 aa4.02□□□□□ -1.77
HMGN4-202ENST00000477243 LOC102724159A0A0B4J2E5 919 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 ANKRD33BA6NCL7 494 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 SOWAHDA6NJG2 315 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 PAK3O75914 559 aaPredicted RBP4.01□□□□□ -1.77
HMGN4-202ENST00000477243 ERCC5P28715 1186 aaPredicted RBP4.01□□□□□ -1.77
HMGN4-202ENST00000477243 GJA5P36382 358 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 SEMA3FQ13275 785 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 ACAP1Q15027 740 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 PWP2Q15269 919 aaKnown RBP4.01□□□□□ -1.77
HMGN4-202ENST00000477243 CDCA8Q53HL2 280 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 GIMAP6Q6P9H5 292 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 DNAJC5GQ8N7S2 189 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 DDX12PQ92771 950 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 TRIM52Q96A61 297 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 CUEDC1Q9NWM3 386 aaPredicted RBP4.01□□□□□ -1.77
HMGN4-202ENST00000477243 LIMD1Q9UGP4 676 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 RIPOR2Q9Y4F9 1068 aa4.01□□□□□ -1.77
HMGN4-202ENST00000477243 ABCC10Q5T3U5 1492 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 TLDC2A0PJX2 215 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 SPTLC1O15269 473 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 IBSPP21815 317 aaPredicted RBP4□□□□□ -1.77
HMGN4-202ENST00000477243 SSFA2P28290 1259 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 ITGAEP38570 1179 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 GORABQ5T7V8 394 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 PLPP6Q8IY26 295 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 PNMA1Q8ND90 353 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 PHOX2BQ99453 314 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 SLC4A5Q9BY07 1137 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 BIN2Q9UBW5 565 aaPredicted RBP4□□□□□ -1.77
HMGN4-202ENST00000477243 BRPF3Q9ULD4 1205 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 MAFBQ9Y5Q3 323 aaPredicted RBP4□□□□□ -1.77
HMGN4-202ENST00000477243 CACNA1BQ00975 2339 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 PCNTO95613 3336 aa4□□□□□ -1.77
HMGN4-202ENST00000477243 SYNGAP1Q96PV0 1343 aa3.99□□□□□ -1.77
HMGN4-202ENST00000477243 NUTM2BA6NNL0 878 aaPredicted RBP3.99□□□□□ -1.77
HMGN4-202ENST00000477243 NUTM2EB1AL46 878 aaPredicted RBP3.99□□□□□ -1.77
HMGN4-202ENST00000477243 LZTS3O60299 673 aaPredicted RBP3.99□□□□□ -1.77
HMGN4-202ENST00000477243 USP17L8P0C7I0 530 aa3.99□□□□□ -1.77
HMGN4-202ENST00000477243 IGBP1P78318 339 aa3.99□□□□□ -1.77
HMGN4-202ENST00000477243 PIP4K2BP78356 416 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms