RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 ORAI2Q96SN7 254 aa26.35■■□□□ 1.81
ABCB1-204ENST00000476862 ESCO1Q5FWF5 840 aa26.34■■□□□ 1.81
ABCB1-204ENST00000476862 ZNF772Q68DY9 489 aaPredicted RBP26.34■■□□□ 1.81
ABCB1-204ENST00000476862 YTHDC2Q9H6S0 1430 aaKnown RBP26.33■■□□□ 1.81
ABCB1-204ENST00000476862 CFAP70Q5T0N1 1121 aa26.33■■□□□ 1.81
ABCB1-204ENST00000476862 KDM2AQ9Y2K7 1162 aa26.33■■□□□ 1.81
ABCB1-204ENST00000476862 TECPR2O15040 1411 aa26.32■■□□□ 1.8
ABCB1-204ENST00000476862 MYOM2P54296 1465 aa26.32■■□□□ 1.8
ABCB1-204ENST00000476862 LAMC1P11047 1609 aa26.31■■□□□ 1.8
ABCB1-204ENST00000476862 KNDC1Q76NI1 1749 aa26.31■■□□□ 1.8
ABCB1-204ENST00000476862 DCAF11Q8TEB1 546 aa26.3■■□□□ 1.8
ABCB1-204ENST00000476862 SIRT1Q96EB6 747 aa26.3■■□□□ 1.8
ABCB1-204ENST00000476862 STAC3Q96MF2 364 aa26.3■■□□□ 1.8
ABCB1-204ENST00000476862 NUTM2FA1L443 756 aa26.29■■□□□ 1.8
ABCB1-204ENST00000476862 CDC42BPGQ6DT37 1551 aa26.29■■□□□ 1.8
ABCB1-204ENST00000476862 LRP6O75581 1613 aa26.28■■□□□ 1.8
ABCB1-204ENST00000476862 POGKQ9P215 609 aa26.27■■□□□ 1.8
ABCB1-204ENST00000476862 NPHP3Q7Z494 1330 aa26.27■■□□□ 1.8
ABCB1-204ENST00000476862 NRXN1Q9ULB1 1477 aa26.26■■□□□ 1.79
ABCB1-204ENST00000476862 PNPLA6Q8IY17 1366 aa26.24■■□□□ 1.79
ABCB1-204ENST00000476862 PLEKHH1Q9ULM0 1364 aa26.24■■□□□ 1.79
ABCB1-204ENST00000476862 SOS2Q07890 1332 aaPredicted RBP26.24■■□□□ 1.79
ABCB1-204ENST00000476862 FOXO3O43524 673 aa26.22■■□□□ 1.79
ABCB1-204ENST00000476862 SAFB2Q14151 953 aaKnown RBP eCLIP26.22■■□□□ 1.79
ABCB1-204ENST00000476862 C8orf37Q96NL8 207 aa26.22■■□□□ 1.79
ABCB1-204ENST00000476862 PRAM1Q96QH2 718 aa26.22■■□□□ 1.79
ABCB1-204ENST00000476862 AFF2P51816 1311 aa26.19■■□□□ 1.78
ABCB1-204ENST00000476862 ADAMTS2O95450 1211 aa26.19■■□□□ 1.78
ABCB1-204ENST00000476862 RXRBP28702 533 aa26.19■■□□□ 1.78
ABCB1-204ENST00000476862 NGLY1Q96IV0 654 aa26.19■■□□□ 1.78
ABCB1-204ENST00000476862 TRAK1Q9UPV9 953 aa26.19■■□□□ 1.78
ABCB1-204ENST00000476862 XPCQ01831 940 aaPredicted RBP26.16■■□□□ 1.78
ABCB1-204ENST00000476862 FMN2Q9NZ56 1722 aa26.16■■□□□ 1.78
ABCB1-204ENST00000476862 DLC1Q96QB1 1528 aa26.13■■□□□ 1.77
ABCB1-204ENST00000476862 PSME1Q06323 249 aa26.12■■□□□ 1.77
ABCB1-204ENST00000476862 KIF1AQ12756 1690 aa26.12■■□□□ 1.77
ABCB1-204ENST00000476862 QTRT2Q9H974 415 aaKnown RBP26.11■■□□□ 1.77
ABCB1-204ENST00000476862 PHF8Q9UPP1 1060 aa26.11■■□□□ 1.77
ABCB1-204ENST00000476862 KRT28Q7Z3Y7 464 aa26.1■■□□□ 1.77
ABCB1-204ENST00000476862 PXDNQ92626 1479 aa26.08■■□□□ 1.77
ABCB1-204ENST00000476862 MINK1Q8N4C8 1332 aaPredicted RBP26.08■■□□□ 1.77
ABCB1-204ENST00000476862 RGPD8O14715 1765 aaPredicted RBP26.07■■□□□ 1.76
ABCB1-204ENST00000476862 HAP1P54257 671 aaPredicted RBP26.07■■□□□ 1.76
ABCB1-204ENST00000476862 HIRIP3Q9BW71 556 aaPredicted RBP26.07■■□□□ 1.76
ABCB1-204ENST00000476862 ADGRB1O14514 1584 aa26.07■■□□□ 1.76
ABCB1-204ENST00000476862 EIF3AQ14152 1382 aaKnown RBP26.07■■□□□ 1.76
ABCB1-204ENST00000476862 USP21Q9UK80 565 aa26.06■■□□□ 1.76
ABCB1-204ENST00000476862 RBM6P78332 1123 aaKnown RBP26.05■■□□□ 1.76
ABCB1-204ENST00000476862 COL22A1Q8NFW1 1626 aaPredicted RBP26.04■■□□□ 1.76
ABCB1-204ENST00000476862 LMOD2Q6P5Q4 547 aa26.04■■□□□ 1.76
ABCB1-204ENST00000476862 SPATA31A3Q5VYP0 1347 aa26.03■■□□□ 1.76
ABCB1-204ENST00000476862 PMFBP1Q8TBY8 1022 aa26.02■■□□□ 1.76
ABCB1-204ENST00000476862 TRPC5Q9UL62 973 aaPredicted RBP26.02■■□□□ 1.76
ABCB1-204ENST00000476862 ANKARQ7Z5J8 1434 aa26.02■■□□□ 1.76
ABCB1-204ENST00000476862 WASLO00401 505 aaPredicted RBP26■■□□□ 1.75
ABCB1-204ENST00000476862 ADGRB2O60241 1585 aa25.99■■□□□ 1.75
ABCB1-204ENST00000476862 CDK12Q9NYV4 1490 aaPredicted RBP25.98■■□□□ 1.75
ABCB1-204ENST00000476862 FNBP4Q8N3X1 1017 aaPredicted RBP25.98■■□□□ 1.75
ABCB1-204ENST00000476862 GPRASP1Q5JY77 1395 aa25.97■■□□□ 1.75
ABCB1-204ENST00000476862 PLEKHG5O94827 1062 aa25.97■■□□□ 1.75
ABCB1-204ENST00000476862 KIAA1210Q9ULL0 1709 aa25.95■■□□□ 1.74
ABCB1-204ENST00000476862 MARF1Q9Y4F3 1742 aaKnown RBP25.95■■□□□ 1.74
ABCB1-204ENST00000476862 NGDNQ8NEJ9 315 aaKnown RBP25.95■■□□□ 1.74
ABCB1-204ENST00000476862 TNS3Q68CZ2 1445 aa25.95■■□□□ 1.74
ABCB1-204ENST00000476862 SBNO1A3KN83 1393 aa25.95■■□□□ 1.74
ABCB1-204ENST00000476862 ARHGEF10O15013 1369 aa25.94■■□□□ 1.74
ABCB1-204ENST00000476862 NEUROD1Q13562 356 aa25.93■■□□□ 1.74
ABCB1-204ENST00000476862 ARHGEF28Q8N1W1 1705 aaKnown RBP25.93■■□□□ 1.74
ABCB1-204ENST00000476862 TULP4Q9NRJ4 1543 aa25.93■■□□□ 1.74
ABCB1-204ENST00000476862 USP32Q8NFA0 1604 aa25.9■■□□□ 1.74
ABCB1-204ENST00000476862 PAK3O75914 559 aaPredicted RBP25.89■■□□□ 1.74
ABCB1-204ENST00000476862 NBPF1Q3BBV0 1214 aa25.89■■□□□ 1.74
ABCB1-204ENST00000476862 UPF1Q92900 1129 aaKnown RBP eCLIP25.89■■□□□ 1.74
ABCB1-204ENST00000476862 NUDT16Q96DE0 195 aaKnown RBP25.89■■□□□ 1.74
ABCB1-204ENST00000476862 CABLES1Q8TDN4 633 aa25.88■■□□□ 1.73
ABCB1-204ENST00000476862 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
ABCB1-204ENST00000476862 SIN3AQ96ST3 1273 aa25.88■■□□□ 1.73
ABCB1-204ENST00000476862 CDK19Q9BWU1 502 aa25.88■■□□□ 1.73
ABCB1-204ENST00000476862 PRR36Q9H6K5 1346 aa25.88■■□□□ 1.73
ABCB1-204ENST00000476862 RGS12O14924 1447 aa25.87■■□□□ 1.73
ABCB1-204ENST00000476862 ITSN1Q15811 1721 aa25.86■■□□□ 1.73
ABCB1-204ENST00000476862 UNC5CLQ8IV45 518 aa25.86■■□□□ 1.73
ABCB1-204ENST00000476862 ATRNO75882 1429 aa25.86■■□□□ 1.73
ABCB1-204ENST00000476862 GJD4Q96KN9 370 aaPredicted RBP25.84■■□□□ 1.73
ABCB1-204ENST00000476862 CENPJQ9HC77 1338 aaPredicted RBP25.83■■□□□ 1.73
ABCB1-204ENST00000476862 SRPK2P78362 688 aaKnown RBP25.82■■□□□ 1.72
ABCB1-204ENST00000476862 CCDC9Q9Y3X0 531 aaKnown RBP25.82■■□□□ 1.72
ABCB1-204ENST00000476862 BCL9LQ86UU0 1499 aa25.82■■□□□ 1.72
ABCB1-204ENST00000476862 CCDC61Q9Y6R9 512 aa25.81■■□□□ 1.72
ABCB1-204ENST00000476862 ATAD2Q6PL18 1390 aa25.79■■□□□ 1.72
ABCB1-204ENST00000476862 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.77■■□□□ 1.72
ABCB1-204ENST00000476862 ATP7BP35670 1465 aa25.77■■□□□ 1.72
ABCB1-204ENST00000476862 SLIT2O94813 1529 aa25.77■■□□□ 1.72
ABCB1-204ENST00000476862 TRPM3Q9HCF6 1732 aaPredicted RBP25.77■■□□□ 1.72
ABCB1-204ENST00000476862 TRIM26Q12899 539 aaPredicted RBP25.76■■□□□ 1.71
ABCB1-204ENST00000476862 ROCK2O75116 1388 aaKnown RBP25.74■■□□□ 1.71
ABCB1-204ENST00000476862 ACEP12821 1306 aa25.74■■□□□ 1.71
ABCB1-204ENST00000476862 FAM83GA6ND36 823 aa25.73■■□□□ 1.71
ABCB1-204ENST00000476862 NBPF8Q3BBV2 869 aa25.73■■□□□ 1.71
ABCB1-204ENST00000476862 ABCA3Q99758 1704 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms