RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
VSTM4-203ENST00000476018 LAMC1P11047 1609 aa19.29■□□□□ 0.68
VSTM4-203ENST00000476018 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
VSTM4-203ENST00000476018 RXRBP28702 533 aa19.28■□□□□ 0.68
VSTM4-203ENST00000476018 AFF2P51816 1311 aa19.27■□□□□ 0.68
VSTM4-203ENST00000476018 CDK12Q9NYV4 1490 aaPredicted RBP19.27■□□□□ 0.67
VSTM4-203ENST00000476018 DDX17Q92841 729 aaKnown RBP19.26■□□□□ 0.67
VSTM4-203ENST00000476018 ANKRD30BQ9BXX2 1392 aa19.26■□□□□ 0.67
VSTM4-203ENST00000476018 CDC42BPGQ6DT37 1551 aa19.25■□□□□ 0.67
VSTM4-203ENST00000476018 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
VSTM4-203ENST00000476018 C8orf37Q96NL8 207 aa19.24■□□□□ 0.67
VSTM4-203ENST00000476018 MPHOSPH9Q99550 1183 aa19.24■□□□□ 0.67
VSTM4-203ENST00000476018 SOS2Q07890 1332 aaPredicted RBP19.24■□□□□ 0.67
VSTM4-203ENST00000476018 ADGRF5Q8IZF2 1346 aa19.23■□□□□ 0.67
VSTM4-203ENST00000476018 IFT172Q9UG01 1749 aa19.22■□□□□ 0.67
VSTM4-203ENST00000476018 RGL3Q3MIN7 710 aa19.22■□□□□ 0.67
VSTM4-203ENST00000476018 ORAI2Q96SN7 254 aa19.22■□□□□ 0.67
VSTM4-203ENST00000476018 TECPR2O15040 1411 aa19.22■□□□□ 0.67
VSTM4-203ENST00000476018 U3KPZ7 1027 aaPredicted RBP19.2■□□□□ 0.66
VSTM4-203ENST00000476018 NPHP3Q7Z494 1330 aa19.2■□□□□ 0.66
VSTM4-203ENST00000476018 LRPPRCP42704 1394 aaKnown RBP19.19■□□□□ 0.66
VSTM4-203ENST00000476018 PIK3C2GO75747 1445 aa19.19■□□□□ 0.66
VSTM4-203ENST00000476018 KNDC1Q76NI1 1749 aa19.19■□□□□ 0.66
VSTM4-203ENST00000476018 RBM6P78332 1123 aaKnown RBP19.18■□□□□ 0.66
VSTM4-203ENST00000476018 ESCO1Q5FWF5 840 aa19.18■□□□□ 0.66
VSTM4-203ENST00000476018 UPF1Q92900 1129 aaKnown RBP eCLIP19.18■□□□□ 0.66
VSTM4-203ENST00000476018 NGLY1Q96IV0 654 aa19.18■□□□□ 0.66
VSTM4-203ENST00000476018 QTRT2Q9H974 415 aaKnown RBP19.18■□□□□ 0.66
VSTM4-203ENST00000476018 ABCC11Q96J66 1382 aa19.18■□□□□ 0.66
VSTM4-203ENST00000476018 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
VSTM4-203ENST00000476018 STK26Q9P289 416 aa19.17■□□□□ 0.66
VSTM4-203ENST00000476018 COL22A1Q8NFW1 1626 aaPredicted RBP19.17■□□□□ 0.66
VSTM4-203ENST00000476018 RGS12O14924 1447 aa19.14■□□□□ 0.65
VSTM4-203ENST00000476018 PXDNQ92626 1479 aa19.14■□□□□ 0.65
VSTM4-203ENST00000476018 WAPLQ7Z5K2 1190 aa19.13■□□□□ 0.65
VSTM4-203ENST00000476018 YTHDC2Q9H6S0 1430 aaKnown RBP19.13■□□□□ 0.65
VSTM4-203ENST00000476018 TMEM132EQ6IEE7 984 aa19.12■□□□□ 0.65
VSTM4-203ENST00000476018 MYOM2P54296 1465 aa19.11■□□□□ 0.65
VSTM4-203ENST00000476018 USP21Q9UK80 565 aa19.11■□□□□ 0.65
VSTM4-203ENST00000476018 FOXO3O43524 673 aa19.1■□□□□ 0.65
VSTM4-203ENST00000476018 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
VSTM4-203ENST00000476018 FNBP4Q8N3X1 1017 aaPredicted RBP19.1■□□□□ 0.65
VSTM4-203ENST00000476018 SIRT1Q96EB6 747 aa19.1■□□□□ 0.65
VSTM4-203ENST00000476018 TRPC5Q9UL62 973 aaPredicted RBP19.1■□□□□ 0.65
VSTM4-203ENST00000476018 KIF1AQ12756 1690 aa19.1■□□□□ 0.65
VSTM4-203ENST00000476018 NRXN1Q9ULB1 1477 aa19.09■□□□□ 0.65
VSTM4-203ENST00000476018 PLEKHH1Q9ULM0 1364 aa19.09■□□□□ 0.65
VSTM4-203ENST00000476018 FMN2Q9NZ56 1722 aa19.09■□□□□ 0.65
VSTM4-203ENST00000476018 C14orf93Q9H972 538 aaKnown RBP19.09■□□□□ 0.65
VSTM4-203ENST00000476018 DHX57Q6P158 1386 aaKnown RBP19.08■□□□□ 0.65
VSTM4-203ENST00000476018 NUTM2FA1L443 756 aa19.07■□□□□ 0.64
VSTM4-203ENST00000476018 XPCQ01831 940 aaPredicted RBP19.06■□□□□ 0.64
VSTM4-203ENST00000476018 ATRNO75882 1429 aa19.06■□□□□ 0.64
VSTM4-203ENST00000476018 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
VSTM4-203ENST00000476018 MARF1Q9Y4F3 1742 aaKnown RBP19.05■□□□□ 0.64
VSTM4-203ENST00000476018 ATAD2Q6PL18 1390 aa19.05■□□□□ 0.64
VSTM4-203ENST00000476018 CFAP70Q5T0N1 1121 aa19.03■□□□□ 0.64
VSTM4-203ENST00000476018 SPATA31A3Q5VYP0 1347 aa19.02■□□□□ 0.64
VSTM4-203ENST00000476018 DLC1Q96QB1 1528 aa19.01■□□□□ 0.63
VSTM4-203ENST00000476018 BCL9LQ86UU0 1499 aa19.01■□□□□ 0.63
VSTM4-203ENST00000476018 PSME1Q06323 249 aa19■□□□□ 0.63
VSTM4-203ENST00000476018 KRT28Q7Z3Y7 464 aa19■□□□□ 0.63
VSTM4-203ENST00000476018 PRAM1Q96QH2 718 aa19■□□□□ 0.63
VSTM4-203ENST00000476018 PHF8Q9UPP1 1060 aa19■□□□□ 0.63
VSTM4-203ENST00000476018 POGKQ9P215 609 aa18.99■□□□□ 0.63
VSTM4-203ENST00000476018 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.99■□□□□ 0.63
VSTM4-203ENST00000476018 TNS3Q68CZ2 1445 aa18.99■□□□□ 0.63
VSTM4-203ENST00000476018 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
VSTM4-203ENST00000476018 USP32Q8NFA0 1604 aa18.97■□□□□ 0.63
VSTM4-203ENST00000476018 HAP1P54257 671 aaPredicted RBP18.97■□□□□ 0.63
VSTM4-203ENST00000476018 ADGRB2O60241 1585 aa18.97■□□□□ 0.63
VSTM4-203ENST00000476018 SBNO1A3KN83 1393 aa18.96■□□□□ 0.63
VSTM4-203ENST00000476018 EP400Q96L91 3159 aa18.96■□□□□ 0.63
VSTM4-203ENST00000476018 SAFB2Q14151 953 aaKnown RBP eCLIP18.96■□□□□ 0.635e-7■■■■□ 21.7
VSTM4-203ENST00000476018 GJD4Q96KN9 370 aaPredicted RBP18.96■□□□□ 0.63
VSTM4-203ENST00000476018 STAC3Q96MF2 364 aa18.96■□□□□ 0.63
VSTM4-203ENST00000476018 ADGRB1O14514 1584 aa18.96■□□□□ 0.63
VSTM4-203ENST00000476018 RGPD8O14715 1765 aaPredicted RBP18.96■□□□□ 0.63
VSTM4-203ENST00000476018 SLIT2O94813 1529 aa18.95■□□□□ 0.62
VSTM4-203ENST00000476018 ARHGEF10O15013 1369 aa18.95■□□□□ 0.62
VSTM4-203ENST00000476018 EIF3AQ14152 1382 aaKnown RBP18.95■□□□□ 0.62
VSTM4-203ENST00000476018 UNC5CLQ8IV45 518 aa18.95■□□□□ 0.62
VSTM4-203ENST00000476018 HRCP23327 699 aa18.93■□□□□ 0.62
VSTM4-203ENST00000476018 DCAF11Q8TEB1 546 aa18.92■□□□□ 0.62
VSTM4-203ENST00000476018 RALGAPBQ86X10 1494 aa18.91■□□□□ 0.62
VSTM4-203ENST00000476018 CCDC125Q86Z20 511 aa18.91■□□□□ 0.62
VSTM4-203ENST00000476018 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
VSTM4-203ENST00000476018 TRAK1Q9UPV9 953 aa18.91■□□□□ 0.62
VSTM4-203ENST00000476018 LMOD2Q6P5Q4 547 aa18.9■□□□□ 0.62
VSTM4-203ENST00000476018 KDM2AQ9Y2K7 1162 aa18.9■□□□□ 0.62
VSTM4-203ENST00000476018 NWD2Q9ULI1 1742 aa18.89■□□□□ 0.61
VSTM4-203ENST00000476018 TULP4Q9NRJ4 1543 aa18.89■□□□□ 0.61
VSTM4-203ENST00000476018 GLI3P10071 1580 aa18.89■□□□□ 0.61
VSTM4-203ENST00000476018 ABCA3Q99758 1704 aa18.88■□□□□ 0.61
VSTM4-203ENST00000476018 CAPN15O75808 1086 aa18.88■□□□□ 0.61
VSTM4-203ENST00000476018 PMFBP1Q8TBY8 1022 aa18.88■□□□□ 0.61
VSTM4-203ENST00000476018 GPRASP1Q5JY77 1395 aa18.88■□□□□ 0.61
VSTM4-203ENST00000476018 PLCH1Q4KWH8 1693 aa18.87■□□□□ 0.61
VSTM4-203ENST00000476018 HIRIP3Q9BW71 556 aaPredicted RBP18.87■□□□□ 0.61
VSTM4-203ENST00000476018 MINK1Q8N4C8 1332 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms