RNA–Protein interactions for RNA: ENST00000475423.1

DKC1-208, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-208ENST00000475423 CDC42BPGQ6DT37 1551 aa24.56■■□□□ 1.52
DKC1-208ENST00000475423 C8orf37Q96NL8 207 aa24.56■■□□□ 1.52
DKC1-208ENST00000475423 LRPPRCP42704 1394 aaKnown RBP24.55■■□□□ 1.52
DKC1-208ENST00000475423 ABCC11Q96J66 1382 aa24.54■■□□□ 1.52
DKC1-208ENST00000475423 PIK3C2GO75747 1445 aa24.54■■□□□ 1.52
DKC1-208ENST00000475423 UPF1Q92900 1129 aaKnown RBP eCLIP24.53■■□□□ 1.52
DKC1-208ENST00000475423 STK26Q9P289 416 aa24.53■■□□□ 1.52
DKC1-208ENST00000475423 WAPLQ7Z5K2 1190 aa24.52■■□□□ 1.52
DKC1-208ENST00000475423 ADAMTS2O95450 1211 aa24.51■■□□□ 1.51
DKC1-208ENST00000475423 TMEM132EQ6IEE7 984 aa24.51■■□□□ 1.51
DKC1-208ENST00000475423 QTRT2Q9H974 415 aaKnown RBP24.51■■□□□ 1.51
DKC1-208ENST00000475423 KNDC1Q76NI1 1749 aa24.5■■□□□ 1.51
DKC1-208ENST00000475423 ESCO1Q5FWF5 840 aa24.5■■□□□ 1.51
DKC1-208ENST00000475423 NPHP3Q7Z494 1330 aa24.5■■□□□ 1.51
DKC1-208ENST00000475423 RBM6P78332 1123 aaKnown RBP24.49■■□□□ 1.51
DKC1-208ENST00000475423 NGLY1Q96IV0 654 aa24.49■■□□□ 1.51
DKC1-208ENST00000475423 COL22A1Q8NFW1 1626 aaPredicted RBP24.49■■□□□ 1.51
DKC1-208ENST00000475423 YTHDC2Q9H6S0 1430 aaKnown RBP24.47■■□□□ 1.51
DKC1-208ENST00000475423 PLEKHH1Q9ULM0 1364 aa24.47■■□□□ 1.51
DKC1-208ENST00000475423 SIRT1Q96EB6 747 aa24.47■■□□□ 1.51
DKC1-208ENST00000475423 C14orf93Q9H972 538 aaKnown RBP24.47■■□□□ 1.51
DKC1-208ENST00000475423 PXDNQ92626 1479 aa24.46■■□□□ 1.51
DKC1-208ENST00000475423 NRXN1Q9ULB1 1477 aa24.45■■□□□ 1.51
DKC1-208ENST00000475423 FOXO3O43524 673 aa24.45■■□□□ 1.5
DKC1-208ENST00000475423 FNBP4Q8N3X1 1017 aaPredicted RBP24.44■■□□□ 1.5
DKC1-208ENST00000475423 RGS12O14924 1447 aa24.44■■□□□ 1.5
DKC1-208ENST00000475423 MYOM2P54296 1465 aa24.43■■□□□ 1.5
DKC1-208ENST00000475423 NUTM2FA1L443 756 aa24.42■■□□□ 1.5
DKC1-208ENST00000475423 RAB3GAP2Q9H2M9 1393 aa24.42■■□□□ 1.5
DKC1-208ENST00000475423 FMN2Q9NZ56 1722 aa24.41■■□□□ 1.5
DKC1-208ENST00000475423 USP21Q9UK80 565 aa24.41■■□□□ 1.5
DKC1-208ENST00000475423 XPCQ01831 940 aaPredicted RBP24.4■■□□□ 1.5
DKC1-208ENST00000475423 CFAP70Q5T0N1 1121 aa24.4■■□□□ 1.5
DKC1-208ENST00000475423 TRPC5Q9UL62 973 aaPredicted RBP24.38■■□□□ 1.49
DKC1-208ENST00000475423 DHX57Q6P158 1386 aaKnown RBP24.38■■□□□ 1.49
DKC1-208ENST00000475423 KIF1AQ12756 1690 aa24.35■■□□□ 1.49
DKC1-208ENST00000475423 MARF1Q9Y4F3 1742 aaKnown RBP24.35■■□□□ 1.49
DKC1-208ENST00000475423 ATRNO75882 1429 aa24.35■■□□□ 1.49
DKC1-208ENST00000475423 SPATA31A3Q5VYP0 1347 aa24.34■■□□□ 1.49
DKC1-208ENST00000475423 BCL9LQ86UU0 1499 aa24.32■■□□□ 1.48
DKC1-208ENST00000475423 RGPD8O14715 1765 aaPredicted RBP24.31■■□□□ 1.48
DKC1-208ENST00000475423 KRT28Q7Z3Y7 464 aa24.31■■□□□ 1.48
DKC1-208ENST00000475423 PRAM1Q96QH2 718 aa24.31■■□□□ 1.48
DKC1-208ENST00000475423 DLC1Q96QB1 1528 aa24.3■■□□□ 1.48
DKC1-208ENST00000475423 PHF8Q9UPP1 1060 aa24.29■■□□□ 1.48
DKC1-208ENST00000475423 ADGRB1O14514 1584 aa24.28■■□□□ 1.48
DKC1-208ENST00000475423 HRCP23327 699 aa24.27■■□□□ 1.48
DKC1-208ENST00000475423 SAFB2Q14151 953 aaKnown RBP eCLIP24.26■■□□□ 1.47
DKC1-208ENST00000475423 ATAD2Q6PL18 1390 aa24.26■■□□□ 1.47
DKC1-208ENST00000475423 PSME1Q06323 249 aa24.25■■□□□ 1.47
DKC1-208ENST00000475423 POGKQ9P215 609 aa24.25■■□□□ 1.47
DKC1-208ENST00000475423 GJD4Q96KN9 370 aaPredicted RBP24.24■■□□□ 1.47
DKC1-208ENST00000475423 STAC3Q96MF2 364 aa24.24■■□□□ 1.47
DKC1-208ENST00000475423 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.24■■□□□ 1.47
DKC1-208ENST00000475423 EP400Q96L91 3159 aa24.24■■□□□ 1.47
DKC1-208ENST00000475423 SBNO1A3KN83 1393 aa24.23■■□□□ 1.47
DKC1-208ENST00000475423 TNS3Q68CZ2 1445 aa24.23■■□□□ 1.47
DKC1-208ENST00000475423 ANKARQ7Z5J8 1434 aa24.23■■□□□ 1.47
DKC1-208ENST00000475423 SLIT2O94813 1529 aa24.23■■□□□ 1.47
DKC1-208ENST00000475423 ADGRB2O60241 1585 aa24.23■■□□□ 1.47
DKC1-208ENST00000475423 USP32Q8NFA0 1604 aa24.22■■□□□ 1.47
DKC1-208ENST00000475423 UNC5CLQ8IV45 518 aa24.21■■□□□ 1.47
DKC1-208ENST00000475423 DCAF11Q8TEB1 546 aa24.21■■□□□ 1.47
DKC1-208ENST00000475423 TRAK1Q9UPV9 953 aa24.21■■□□□ 1.47
DKC1-208ENST00000475423 KDM2AQ9Y2K7 1162 aa24.2■■□□□ 1.46
DKC1-208ENST00000475423 PMFBP1Q8TBY8 1022 aa24.17■■□□□ 1.46
DKC1-208ENST00000475423 CABLES1Q8TDN4 633 aa24.17■■□□□ 1.46
DKC1-208ENST00000475423 ARHGEF10O15013 1369 aa24.16■■□□□ 1.46
DKC1-208ENST00000475423 GLI3P10071 1580 aa24.16■■□□□ 1.46
DKC1-208ENST00000475423 RALGAPBQ86X10 1494 aa24.15■■□□□ 1.46
DKC1-208ENST00000475423 HIRIP3Q9BW71 556 aaPredicted RBP24.15■■□□□ 1.46
DKC1-208ENST00000475423 HAP1P54257 671 aaPredicted RBP24.14■■□□□ 1.45
DKC1-208ENST00000475423 EIF3AQ14152 1382 aaKnown RBP24.14■■□□□ 1.45
DKC1-208ENST00000475423 MINK1Q8N4C8 1332 aaPredicted RBP24.13■■□□□ 1.45
DKC1-208ENST00000475423 PRR36Q9H6K5 1346 aa24.13■■□□□ 1.45
DKC1-208ENST00000475423 ABCA3Q99758 1704 aa24.13■■□□□ 1.45
DKC1-208ENST00000475423 WASLO00401 505 aaPredicted RBP24.13■■□□□ 1.45
DKC1-208ENST00000475423 CCDC125Q86Z20 511 aa24.13■■□□□ 1.45
DKC1-208ENST00000475423 LMOD2Q6P5Q4 547 aa24.12■■□□□ 1.45
DKC1-208ENST00000475423 TRPM3Q9HCF6 1732 aaPredicted RBP24.12■■□□□ 1.45
DKC1-208ENST00000475423 TULP4Q9NRJ4 1543 aa24.11■■□□□ 1.45
DKC1-208ENST00000475423 NWD2Q9ULI1 1742 aa24.11■■□□□ 1.45
DKC1-208ENST00000475423 VPS72Q15906 364 aa24.1■■□□□ 1.45
DKC1-208ENST00000475423 SRCAPQ6ZRS2 3230 aa24.1■■□□□ 1.45
DKC1-208ENST00000475423 PLCH1Q4KWH8 1693 aa24.08■■□□□ 1.45
DKC1-208ENST00000475423 GPRASP1Q5JY77 1395 aa24.08■■□□□ 1.45
DKC1-208ENST00000475423 FAM83GA6ND36 823 aa24.08■■□□□ 1.45
DKC1-208ENST00000475423 ONECUT3O60422 494 aaPredicted RBP24.08■■□□□ 1.45
DKC1-208ENST00000475423 PLEKHG5O94827 1062 aa24.08■■□□□ 1.45
DKC1-208ENST00000475423 ALS2Q96Q42 1657 aa24.08■■□□□ 1.44
DKC1-208ENST00000475423 ARHGEF28Q8N1W1 1705 aaKnown RBP24.07■■□□□ 1.44
DKC1-208ENST00000475423 BRWD3Q6RI45 1802 aa24.05■■□□□ 1.44
DKC1-208ENST00000475423 SEPT12Q8IYM1 358 aa24.04■■□□□ 1.44
DKC1-208ENST00000475423 NGDNQ8NEJ9 315 aaKnown RBP24.02■■□□□ 1.44
DKC1-208ENST00000475423 ATP7BP35670 1465 aa24.01■■□□□ 1.43
DKC1-208ENST00000475423 NUDT16Q96DE0 195 aaKnown RBP24.01■■□□□ 1.43
DKC1-208ENST00000475423 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
DKC1-208ENST00000475423 CCDC9Q9Y3X0 531 aaKnown RBP24■■□□□ 1.43
DKC1-208ENST00000475423 NRAPQ86VF7 1730 aa24■■□□□ 1.43
DKC1-208ENST00000475423 BLMP54132 1417 aaPredicted RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms