RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 HFM1A2PYH4 1435 aa24.2■■□□□ 1.46
ITGB1-211ENST00000475184 CDC42BPGQ6DT37 1551 aa24.19■■□□□ 1.46
ITGB1-211ENST00000475184 MYOM2P54296 1465 aa24.19■■□□□ 1.46
ITGB1-211ENST00000475184 PXDNQ92626 1479 aa24.15■■□□□ 1.46
ITGB1-211ENST00000475184 NAIPQ13075 1403 aa24.15■■□□□ 1.46
ITGB1-211ENST00000475184 NPHP3Q7Z494 1330 aa24.14■■□□□ 1.46
ITGB1-211ENST00000475184 FOXD1Q16676 465 aa24.14■■□□□ 1.45
ITGB1-211ENST00000475184 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.45
ITGB1-211ENST00000475184 BCL9LQ86UU0 1499 aa24.13■■□□□ 1.45
ITGB1-211ENST00000475184 RPGRIP1LQ68CZ1 1315 aa24.13■■□□□ 1.45
ITGB1-211ENST00000475184 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.13■■□□□ 1.45
ITGB1-211ENST00000475184 ZRANB1Q9UGI0 708 aa24.13■■□□□ 1.45
ITGB1-211ENST00000475184 ESCO1Q5FWF5 840 aa24.11■■□□□ 1.45
ITGB1-211ENST00000475184 CCDC125Q86Z20 511 aa24.08■■□□□ 1.45
ITGB1-211ENST00000475184 XPCQ01831 940 aaPredicted RBP24.07■■□□□ 1.44
ITGB1-211ENST00000475184 FOXO3O43524 673 aa24.06■■□□□ 1.44
ITGB1-211ENST00000475184 GJD4Q96KN9 370 aaPredicted RBP24.06■■□□□ 1.44
ITGB1-211ENST00000475184 RRBP1Q9P2E9 1410 aaKnown RBP24.06■■□□□ 1.44
ITGB1-211ENST00000475184 BRWD3Q6RI45 1802 aa24.05■■□□□ 1.44
ITGB1-211ENST00000475184 LRPPRCP42704 1394 aaKnown RBP24.04■■□□□ 1.44
ITGB1-211ENST00000475184 KNDC1Q76NI1 1749 aa24.04■■□□□ 1.44
ITGB1-211ENST00000475184 FMN2Q9NZ56 1722 aa24.04■■□□□ 1.44
ITGB1-211ENST00000475184 GLI3P10071 1580 aa24.03■■□□□ 1.44
ITGB1-211ENST00000475184 IFT172Q9UG01 1749 aa24.03■■□□□ 1.44
ITGB1-211ENST00000475184 TECPR2O15040 1411 aa24.02■■□□□ 1.44
ITGB1-211ENST00000475184 KIF1AQ12756 1690 aa24.02■■□□□ 1.44
ITGB1-211ENST00000475184 SLC4A1APQ9BWU0 796 aaKnown RBP24.02■■□□□ 1.44
ITGB1-211ENST00000475184 RALGAPBQ86X10 1494 aa24■■□□□ 1.43
ITGB1-211ENST00000475184 SLIT2O94813 1529 aa24■■□□□ 1.43
ITGB1-211ENST00000475184 USP32Q8NFA0 1604 aa24■■□□□ 1.43
ITGB1-211ENST00000475184 NUTM2FA1L443 756 aa24■■□□□ 1.43
ITGB1-211ENST00000475184 RGPD8O14715 1765 aaPredicted RBP23.98■■□□□ 1.43
ITGB1-211ENST00000475184 WAPLQ7Z5K2 1190 aa23.98■■□□□ 1.43
ITGB1-211ENST00000475184 UNC5CLQ8IV45 518 aa23.98■■□□□ 1.43
ITGB1-211ENST00000475184 STK26Q9P289 416 aa23.98■■□□□ 1.43
ITGB1-211ENST00000475184 ADGRF5Q8IZF2 1346 aa23.98■■□□□ 1.43
ITGB1-211ENST00000475184 BLMP54132 1417 aaPredicted RBP23.98■■□□□ 1.43
ITGB1-211ENST00000475184 CCDC144AA2RUR9 1427 aa23.96■■□□□ 1.43
ITGB1-211ENST00000475184 SPATA31A3Q5VYP0 1347 aa23.96■■□□□ 1.43
ITGB1-211ENST00000475184 PLCH1Q4KWH8 1693 aa23.95■■□□□ 1.42
ITGB1-211ENST00000475184 ABCC11Q96J66 1382 aa23.94■■□□□ 1.42
ITGB1-211ENST00000475184 PLEKHH1Q9ULM0 1364 aa23.94■■□□□ 1.42
ITGB1-211ENST00000475184 NWD2Q9ULI1 1742 aa23.94■■□□□ 1.42
ITGB1-211ENST00000475184 ABCA3Q99758 1704 aa23.93■■□□□ 1.42
ITGB1-211ENST00000475184 SPATA31E1Q6ZUB1 1445 aa23.93■■□□□ 1.42
ITGB1-211ENST00000475184 ANKRD30BQ9BXX2 1392 aa23.92■■□□□ 1.42
ITGB1-211ENST00000475184 RGL3Q3MIN7 710 aa23.9■■□□□ 1.42
ITGB1-211ENST00000475184 TMEM132EQ6IEE7 984 aa23.9■■□□□ 1.42
ITGB1-211ENST00000475184 PIK3C2GO75747 1445 aa23.9■■□□□ 1.42
ITGB1-211ENST00000475184 KRT28Q7Z3Y7 464 aa23.89■■□□□ 1.41
ITGB1-211ENST00000475184 TNS3Q68CZ2 1445 aa23.89■■□□□ 1.41
ITGB1-211ENST00000475184 YTHDC2Q9H6S0 1430 aaKnown RBP23.88■■□□□ 1.41
ITGB1-211ENST00000475184 DEFB132Q7Z7B7 95 aa23.88■■□□□ 1.41
ITGB1-211ENST00000475184 HAP1P54257 671 aaPredicted RBP23.87■■□□□ 1.41
ITGB1-211ENST00000475184 LRP5O75197 1615 aa23.87■■□□□ 1.41
ITGB1-211ENST00000475184 SF3B2Q13435 895 aaKnown RBP23.86■■□□□ 1.41
ITGB1-211ENST00000475184 SEPT12Q8IYM1 358 aa23.86■■□□□ 1.41
ITGB1-211ENST00000475184 VPS72Q15906 364 aa23.85■■□□□ 1.41
ITGB1-211ENST00000475184 CABLES1Q8TDN4 633 aa23.83■■□□□ 1.41
ITGB1-211ENST00000475184 PHF8Q9UPP1 1060 aa23.83■■□□□ 1.41
ITGB1-211ENST00000475184 PSME1Q06323 249 aa23.82■■□□□ 1.4
ITGB1-211ENST00000475184 NRXN1Q9ULB1 1477 aa23.81■■□□□ 1.4
ITGB1-211ENST00000475184 CCDC9Q9Y3X0 531 aaKnown RBP23.81■■□□□ 1.4
ITGB1-211ENST00000475184 SBNO1A3KN83 1393 aa23.8■■□□□ 1.4
ITGB1-211ENST00000475184 ONECUT3O60422 494 aaPredicted RBP23.8■■□□□ 1.4
ITGB1-211ENST00000475184 PLEKHG5O94827 1062 aa23.8■■□□□ 1.4
ITGB1-211ENST00000475184 NRAPQ86VF7 1730 aa23.8■■□□□ 1.4
ITGB1-211ENST00000475184 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
ITGB1-211ENST00000475184 ARHGEF10O15013 1369 aa23.79■■□□□ 1.4
ITGB1-211ENST00000475184 KRT27Q7Z3Y8 459 aa23.79■■□□□ 1.4
ITGB1-211ENST00000475184 LMOD2Q6P5Q4 547 aa23.77■■□□□ 1.4
ITGB1-211ENST00000475184 TRPM3Q9HCF6 1732 aaPredicted RBP23.76■■□□□ 1.39
ITGB1-211ENST00000475184 MPHOSPH9Q99550 1183 aa23.75■■□□□ 1.39
ITGB1-211ENST00000475184 C14orf93Q9H972 538 aaKnown RBP23.75■■□□□ 1.39
ITGB1-211ENST00000475184 RGPD1P0DJD0 1748 aa23.74■■□□□ 1.39
ITGB1-211ENST00000475184 DHX57Q6P158 1386 aaKnown RBP23.74■■□□□ 1.39
ITGB1-211ENST00000475184 A0A0G2JS52 829 aa23.73■■□□□ 1.39
ITGB1-211ENST00000475184 FAM83GA6ND36 823 aa23.73■■□□□ 1.39
ITGB1-211ENST00000475184 MYT1Q01538 1121 aa23.73■■□□□ 1.39
ITGB1-211ENST00000475184 ALS2Q96Q42 1657 aa23.73■■□□□ 1.39
ITGB1-211ENST00000475184 COL14A1Q05707 1796 aaKnown RBP23.73■■□□□ 1.39
ITGB1-211ENST00000475184 BAG6P46379 1132 aa23.72■■□□□ 1.39
ITGB1-211ENST00000475184 SAFB2Q14151 953 aaKnown RBP eCLIP23.72■■□□□ 1.39
ITGB1-211ENST00000475184 PRAM1Q96QH2 718 aa23.72■■□□□ 1.39
ITGB1-211ENST00000475184 ANKARQ7Z5J8 1434 aa23.72■■□□□ 1.39
ITGB1-211ENST00000475184 ADGRB2O60241 1585 aa23.72■■□□□ 1.39
ITGB1-211ENST00000475184 DLC1Q96QB1 1528 aa23.7■■□□□ 1.38
ITGB1-211ENST00000475184 PSDA5PKW4 1024 aaPredicted RBP23.7■■□□□ 1.38
ITGB1-211ENST00000475184 CFAP70Q5T0N1 1121 aa23.7■■□□□ 1.38
ITGB1-211ENST00000475184 FAM98CQ17RN3 349 aaKnown RBP23.69■■□□□ 1.38
ITGB1-211ENST00000475184 PMFBP1Q8TBY8 1022 aa23.69■■□□□ 1.38
ITGB1-211ENST00000475184 CRYBG1Q9Y4K1 1723 aa23.67■■□□□ 1.38
ITGB1-211ENST00000475184 HRCP23327 699 aa23.67■■□□□ 1.38
ITGB1-211ENST00000475184 BTG4Q9NY30 223 aa23.67■■□□□ 1.38
ITGB1-211ENST00000475184 TNS1Q9HBL0 1735 aaKnown RBP23.67■■□□□ 1.38
ITGB1-211ENST00000475184 THSD7AQ9UPZ6 1657 aa23.65■■□□□ 1.38
ITGB1-211ENST00000475184 POGKQ9P215 609 aa23.65■■□□□ 1.38
ITGB1-211ENST00000475184 GPRASP1Q5JY77 1395 aa23.63■■□□□ 1.37
ITGB1-211ENST00000475184 ADGRB1O14514 1584 aa23.62■■□□□ 1.37
ITGB1-211ENST00000475184 EN1Q05925 392 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms