RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 CDC42BPGQ6DT37 1551 aa21.46■■□□□ 1.03
COL2A1-205ENST00000474996 QTRT2Q9H974 415 aaKnown RBP21.45■■□□□ 1.02
COL2A1-205ENST00000474996 NGLY1Q96IV0 654 aa21.44■■□□□ 1.02
COL2A1-205ENST00000474996 STK26Q9P289 416 aa21.44■■□□□ 1.02
COL2A1-205ENST00000474996 ANKRD30BQ9BXX2 1392 aa21.44■■□□□ 1.02
COL2A1-205ENST00000474996 RGS12O14924 1447 aa21.42■■□□□ 1.02
COL2A1-205ENST00000474996 RBM6P78332 1123 aaKnown RBP21.42■■□□□ 1.02
COL2A1-205ENST00000474996 ESCO1Q5FWF5 840 aa21.42■■□□□ 1.02
COL2A1-205ENST00000474996 WAPLQ7Z5K2 1190 aa21.42■■□□□ 1.02
COL2A1-205ENST00000474996 COL22A1Q8NFW1 1626 aaPredicted RBP21.41■■□□□ 1.02
COL2A1-205ENST00000474996 TECPR2O15040 1411 aa21.41■■□□□ 1.02
COL2A1-205ENST00000474996 LRPPRCP42704 1394 aaKnown RBP21.41■■□□□ 1.02
COL2A1-205ENST00000474996 KNDC1Q76NI1 1749 aa21.41■■□□□ 1.02
COL2A1-205ENST00000474996 PIK3C2GO75747 1445 aa21.4■■□□□ 1.02
COL2A1-205ENST00000474996 TMEM132EQ6IEE7 984 aa21.4■■□□□ 1.02
COL2A1-205ENST00000474996 NPHP3Q7Z494 1330 aa21.39■■□□□ 1.01
COL2A1-205ENST00000474996 ABCC11Q96J66 1382 aa21.38■■□□□ 1.01
COL2A1-205ENST00000474996 PLEKHH1Q9ULM0 1364 aa21.38■■□□□ 1.01
COL2A1-205ENST00000474996 NUTM2FA1L443 756 aa21.38■■□□□ 1.01
COL2A1-205ENST00000474996 PXDNQ92626 1479 aa21.38■■□□□ 1.01
COL2A1-205ENST00000474996 FOXO3O43524 673 aa21.37■■□□□ 1.01
COL2A1-205ENST00000474996 XPCQ01831 940 aaPredicted RBP21.37■■□□□ 1.01
COL2A1-205ENST00000474996 USP21Q9UK80 565 aa21.37■■□□□ 1.01
COL2A1-205ENST00000474996 MYOM2P54296 1465 aa21.35■■□□□ 1.01
COL2A1-205ENST00000474996 YTHDC2Q9H6S0 1430 aaKnown RBP21.35■■□□□ 1.01
COL2A1-205ENST00000474996 FMN2Q9NZ56 1722 aa21.35■■□□□ 1.01
COL2A1-205ENST00000474996 FNBP4Q8N3X1 1017 aaPredicted RBP21.34■■□□□ 1.01
COL2A1-205ENST00000474996 TRPC5Q9UL62 973 aaPredicted RBP21.33■■□□□ 1.01
COL2A1-205ENST00000474996 MARF1Q9Y4F3 1742 aaKnown RBP21.32■■□□□ 1
COL2A1-205ENST00000474996 ACIN1Q9UKV3 1341 aaKnown RBP21.3■■□□□ 1
COL2A1-205ENST00000474996 C14orf93Q9H972 538 aaKnown RBP21.3■■□□□ 1
COL2A1-205ENST00000474996 ATRNO75882 1429 aa21.29■■□□□ 1
COL2A1-205ENST00000474996 KIF1AQ12756 1690 aa21.29■■□□□ 1
COL2A1-205ENST00000474996 NRXN1Q9ULB1 1477 aa21.29■■□□□ 1
COL2A1-205ENST00000474996 RGPD8O14715 1765 aaPredicted RBP21.28■■□□□ 1
COL2A1-205ENST00000474996 CFAP70Q5T0N1 1121 aa21.28■■□□□ 1
COL2A1-205ENST00000474996 SIRT1Q96EB6 747 aa21.27■■□□□ 1
COL2A1-205ENST00000474996 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
COL2A1-205ENST00000474996 DHX57Q6P158 1386 aaKnown RBP21.26■□□□□ 0.99
COL2A1-205ENST00000474996 ATAD2Q6PL18 1390 aa21.25■□□□□ 0.99
COL2A1-205ENST00000474996 RAB3GAP2Q9H2M9 1393 aa21.25■□□□□ 0.99
COL2A1-205ENST00000474996 SPATA31A3Q5VYP0 1347 aa21.25■□□□□ 0.99
COL2A1-205ENST00000474996 SAFB2Q14151 953 aaKnown RBP eCLIP21.23■□□□□ 0.99
COL2A1-205ENST00000474996 KRT28Q7Z3Y7 464 aa21.23■□□□□ 0.99
COL2A1-205ENST00000474996 PRAM1Q96QH2 718 aa21.22■□□□□ 0.99
COL2A1-205ENST00000474996 PHF8Q9UPP1 1060 aa21.21■□□□□ 0.99
COL2A1-205ENST00000474996 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.21■□□□□ 0.99
COL2A1-205ENST00000474996 USP32Q8NFA0 1604 aa21.19■□□□□ 0.98
COL2A1-205ENST00000474996 GJD4Q96KN9 370 aaPredicted RBP21.19■□□□□ 0.98
COL2A1-205ENST00000474996 DLC1Q96QB1 1528 aa21.19■□□□□ 0.98
COL2A1-205ENST00000474996 POGKQ9P215 609 aa21.18■□□□□ 0.98
COL2A1-205ENST00000474996 TNS3Q68CZ2 1445 aa21.18■□□□□ 0.98
COL2A1-205ENST00000474996 SLIT2O94813 1529 aa21.18■□□□□ 0.98
COL2A1-205ENST00000474996 PSME1Q06323 249 aa21.17■□□□□ 0.98
COL2A1-205ENST00000474996 EP400Q96L91 3159 aa21.16■□□□□ 0.98
COL2A1-205ENST00000474996 ADGRB1O14514 1584 aa21.16■□□□□ 0.98
COL2A1-205ENST00000474996 UNC5CLQ8IV45 518 aa21.16■□□□□ 0.98
COL2A1-205ENST00000474996 GLI3P10071 1580 aa21.15■□□□□ 0.98
COL2A1-205ENST00000474996 PLEKHG5O94827 1062 aa21.15■□□□□ 0.98
COL2A1-205ENST00000474996 HAP1P54257 671 aaPredicted RBP21.15■□□□□ 0.98
COL2A1-205ENST00000474996 CABLES1Q8TDN4 633 aa21.15■□□□□ 0.98
COL2A1-205ENST00000474996 ADGRB2O60241 1585 aa21.14■□□□□ 0.98
COL2A1-205ENST00000474996 SBNO1A3KN83 1393 aa21.14■□□□□ 0.98
COL2A1-205ENST00000474996 TRAK1Q9UPV9 953 aa21.14■□□□□ 0.97
COL2A1-205ENST00000474996 RALGAPBQ86X10 1494 aa21.13■□□□□ 0.97
COL2A1-205ENST00000474996 ANKARQ7Z5J8 1434 aa21.13■□□□□ 0.97
COL2A1-205ENST00000474996 ABCA3Q99758 1704 aa21.13■□□□□ 0.97
COL2A1-205ENST00000474996 LMOD2Q6P5Q4 547 aa21.13■□□□□ 0.97
COL2A1-205ENST00000474996 PMFBP1Q8TBY8 1022 aa21.13■□□□□ 0.97
COL2A1-205ENST00000474996 KDM2AQ9Y2K7 1162 aa21.13■□□□□ 0.97
COL2A1-205ENST00000474996 HIRIP3Q9BW71 556 aaPredicted RBP21.12■□□□□ 0.97
COL2A1-205ENST00000474996 DCAF11Q8TEB1 546 aa21.11■□□□□ 0.97
COL2A1-205ENST00000474996 PLCH1Q4KWH8 1693 aa21.11■□□□□ 0.97
COL2A1-205ENST00000474996 ARHGEF10O15013 1369 aa21.1■□□□□ 0.97
COL2A1-205ENST00000474996 MINK1Q8N4C8 1332 aaPredicted RBP21.09■□□□□ 0.97
COL2A1-205ENST00000474996 BRWD3Q6RI45 1802 aa21.09■□□□□ 0.97
COL2A1-205ENST00000474996 TRPM3Q9HCF6 1732 aaPredicted RBP21.08■□□□□ 0.97
COL2A1-205ENST00000474996 NWD2Q9ULI1 1742 aa21.08■□□□□ 0.97
COL2A1-205ENST00000474996 CCDC125Q86Z20 511 aa21.07■□□□□ 0.96
COL2A1-205ENST00000474996 PRR36Q9H6K5 1346 aa21.06■□□□□ 0.96
COL2A1-205ENST00000474996 VPS72Q15906 364 aa21.06■□□□□ 0.96
COL2A1-205ENST00000474996 EIF3AQ14152 1382 aaKnown RBP21.06■□□□□ 0.96
COL2A1-205ENST00000474996 TULP4Q9NRJ4 1543 aa21.05■□□□□ 0.96
COL2A1-205ENST00000474996 WASLO00401 505 aaPredicted RBP21.04■□□□□ 0.96
COL2A1-205ENST00000474996 CCDC9Q9Y3X0 531 aaKnown RBP21.04■□□□□ 0.96
COL2A1-205ENST00000474996 ALS2Q96Q42 1657 aa21.04■□□□□ 0.96
COL2A1-205ENST00000474996 GPRASP1Q5JY77 1395 aa21.03■□□□□ 0.96
COL2A1-205ENST00000474996 FAM83GA6ND36 823 aa21.03■□□□□ 0.96
COL2A1-205ENST00000474996 SEPT12Q8IYM1 358 aa21.03■□□□□ 0.96
COL2A1-205ENST00000474996 STAC3Q96MF2 364 aa21.03■□□□□ 0.96
COL2A1-205ENST00000474996 ZRANB1Q9UGI0 708 aa21.03■□□□□ 0.96
COL2A1-205ENST00000474996 ARHGEF28Q8N1W1 1705 aaKnown RBP21.03■□□□□ 0.96
COL2A1-205ENST00000474996 HRCP23327 699 aa21.02■□□□□ 0.96
COL2A1-205ENST00000474996 SRCAPQ6ZRS2 3230 aa21.02■□□□□ 0.95
COL2A1-205ENST00000474996 BLMP54132 1417 aaPredicted RBP21.01■□□□□ 0.95
COL2A1-205ENST00000474996 NRAPQ86VF7 1730 aa21.01■□□□□ 0.95
COL2A1-205ENST00000474996 ONECUT3O60422 494 aaPredicted RBP20.99■□□□□ 0.95
COL2A1-205ENST00000474996 NGDNQ8NEJ9 315 aaKnown RBP20.99■□□□□ 0.95
COL2A1-205ENST00000474996 ITSN1Q15811 1721 aa20.98■□□□□ 0.95
COL2A1-205ENST00000474996 CRYBG1Q9Y4K1 1723 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms