RNA–Protein interactions for RNA: ENST00000474345.5

FDPS-210, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-210ENST00000474345 SAFB2Q14151 953 aaKnown RBP eCLIP21.64■■□□□ 1.05
FDPS-210ENST00000474345 SLAIN2Q9P270 581 aa21.64■■□□□ 1.05
FDPS-210ENST00000474345 ADGRL3Q9HAR2 1447 aa21.63■■□□□ 1.05
FDPS-210ENST00000474345 NALCNQ8IZF0 1738 aa21.62■■□□□ 1.05
FDPS-210ENST00000474345 ROCK2O75116 1388 aaKnown RBP21.61■■□□□ 1.05
FDPS-210ENST00000474345 SCAF1Q9H7N4 1312 aaKnown RBP21.6■■□□□ 1.05
FDPS-210ENST00000474345 GPRASP1Q5JY77 1395 aa21.6■■□□□ 1.05
FDPS-210ENST00000474345 ARHGEF28Q8N1W1 1705 aaKnown RBP21.58■■□□□ 1.05
FDPS-210ENST00000474345 CARD11Q9BXL7 1154 aa21.58■■□□□ 1.05
FDPS-210ENST00000474345 DCCP43146 1447 aa21.57■■□□□ 1.04
FDPS-210ENST00000474345 RALGAPBQ86X10 1494 aa21.56■■□□□ 1.04
FDPS-210ENST00000474345 MINK1Q8N4C8 1332 aaPredicted RBP21.55■■□□□ 1.04
FDPS-210ENST00000474345 HIRIP3Q9BW71 556 aaPredicted RBP21.55■■□□□ 1.04
FDPS-210ENST00000474345 MST1RQ04912 1400 aa21.55■■□□□ 1.04
FDPS-210ENST00000474345 CENPJQ9HC77 1338 aaPredicted RBP21.53■■□□□ 1.04
FDPS-210ENST00000474345 NUTM2FA1L443 756 aa21.52■■□□□ 1.04
FDPS-210ENST00000474345 C1orf167Q5SNV9 1468 aa21.51■■□□□ 1.03
FDPS-210ENST00000474345 CDC42BPGQ6DT37 1551 aa21.5■■□□□ 1.03
FDPS-210ENST00000474345 WASLO00401 505 aaPredicted RBP21.5■■□□□ 1.03
FDPS-210ENST00000474345 ORAI2Q96SN7 254 aa21.5■■□□□ 1.03
FDPS-210ENST00000474345 ROBO1Q9Y6N7 1651 aa21.5■■□□□ 1.03
FDPS-210ENST00000474345 HSPA1LP34931 641 aa21.49■■□□□ 1.03
FDPS-210ENST00000474345 BRINP3Q76B58 766 aa21.49■■□□□ 1.03
FDPS-210ENST00000474345 CDK19Q9BWU1 502 aa21.47■■□□□ 1.03
FDPS-210ENST00000474345 FMN2Q9NZ56 1722 aa21.46■■□□□ 1.03
FDPS-210ENST00000474345 ESCO1Q5FWF5 840 aa21.46■■□□□ 1.03
FDPS-210ENST00000474345 RGPD8O14715 1765 aaPredicted RBP21.46■■□□□ 1.03
FDPS-210ENST00000474345 ADGRB2O60241 1585 aa21.45■■□□□ 1.02
FDPS-210ENST00000474345 EIF3AQ14152 1382 aaKnown RBP21.45■■□□□ 1.02
FDPS-210ENST00000474345 ST20-MTHFSA0A0A6YYL1 179 aa21.43■■□□□ 1.02
FDPS-210ENST00000474345 PRR36Q9H6K5 1346 aa21.43■■□□□ 1.02
FDPS-210ENST00000474345 QRICH2Q9H0J4 1663 aa21.43■■□□□ 1.02
FDPS-210ENST00000474345 DDX17Q92841 729 aaKnown RBP21.41■■□□□ 1.02
FDPS-210ENST00000474345 NUDT16Q96DE0 195 aaKnown RBP21.41■■□□□ 1.02
FDPS-210ENST00000474345 USP32Q8NFA0 1604 aa21.4■■□□□ 1.02
FDPS-210ENST00000474345 CABP2Q9NPB3 220 aa21.39■■□□□ 1.01
FDPS-210ENST00000474345 PHF8Q9UPP1 1060 aa21.39■■□□□ 1.01
FDPS-210ENST00000474345 USP47Q96K76 1375 aa21.38■■□□□ 1.01
FDPS-210ENST00000474345 SRPK2P78362 688 aaKnown RBP21.38■■□□□ 1.01
FDPS-210ENST00000474345 ANKARQ7Z5J8 1434 aa21.38■■□□□ 1.01
FDPS-210ENST00000474345 EVC2Q86UK5 1308 aa21.37■■□□□ 1.01
FDPS-210ENST00000474345 FOXO3O43524 673 aa21.37■■□□□ 1.01
FDPS-210ENST00000474345 TESK2Q96S53 571 aa21.37■■□□□ 1.01
FDPS-210ENST00000474345 TULP4Q9NRJ4 1543 aa21.37■■□□□ 1.01
FDPS-210ENST00000474345 PHLPP1O60346 1717 aa21.36■■□□□ 1.01
FDPS-210ENST00000474345 PMFBP1Q8TBY8 1022 aa21.36■■□□□ 1.01
FDPS-210ENST00000474345 SBNO2Q9Y2G9 1366 aa21.36■■□□□ 1.01
FDPS-210ENST00000474345 CCDC61Q9Y6R9 512 aa21.35■■□□□ 1.01
FDPS-210ENST00000474345 AHDC1Q5TGY3 1603 aaPredicted RBP21.35■■□□□ 1.01
FDPS-210ENST00000474345 NHSL1Q5SYE7 1610 aa21.34■■□□□ 1.01
FDPS-210ENST00000474345 SOS2Q07890 1332 aaPredicted RBP21.32■■□□□ 1
FDPS-210ENST00000474345 ATP7BP35670 1465 aa21.32■■□□□ 1
FDPS-210ENST00000474345 NPHP3Q7Z494 1330 aa21.31■■□□□ 1
FDPS-210ENST00000474345 PLEKHG3A1L390 1219 aa21.31■■□□□ 1
FDPS-210ENST00000474345 SLC24A1O60721 1099 aa21.31■■□□□ 1
FDPS-210ENST00000474345 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
FDPS-210ENST00000474345 XPCQ01831 940 aaPredicted RBP21.31■■□□□ 1
FDPS-210ENST00000474345 KRT28Q7Z3Y7 464 aa21.31■■□□□ 1
FDPS-210ENST00000474345 COL16A1Q07092 1604 aaPredicted RBP21.3■■□□□ 1
FDPS-210ENST00000474345 LRRC59Q96AG4 307 aaKnown RBP21.3■■□□□ 1
FDPS-210ENST00000474345 KIF1AQ12756 1690 aa21.29■■□□□ 1
FDPS-210ENST00000474345 HSPA5P11021 654 aaKnown RBP21.29■■□□□ 1
FDPS-210ENST00000474345 PSME1Q06323 249 aa21.29■■□□□ 1
FDPS-210ENST00000474345 NGDNQ8NEJ9 315 aaKnown RBP21.29■■□□□ 1
FDPS-210ENST00000474345 CABP1Q9NZU7 370 aa21.29■■□□□ 1
FDPS-210ENST00000474345 PUS7Q96PZ0 661 aaKnown RBP21.28■■□□□ 1
FDPS-210ENST00000474345 ACEP12821 1306 aa21.27■□□□□ 0.99
FDPS-210ENST00000474345 ITSN1Q15811 1721 aa21.26■□□□□ 0.99
FDPS-210ENST00000474345 TMF1P82094 1093 aa21.26■□□□□ 0.99
FDPS-210ENST00000474345 PXDNQ92626 1479 aa21.26■□□□□ 0.99
FDPS-210ENST00000474345 PPIP5K1Q6PFW1 1433 aa21.25■□□□□ 0.99
FDPS-210ENST00000474345 TOPAZ1Q8N9V7 1692 aa21.24■□□□□ 0.99
FDPS-210ENST00000474345 JCADQ9P266 1359 aa21.24■□□□□ 0.99
FDPS-210ENST00000474345 ATAD2Q6PL18 1390 aa21.23■□□□□ 0.99
FDPS-210ENST00000474345 DISP3Q9P2K9 1392 aa21.23■□□□□ 0.99
FDPS-210ENST00000474345 POLR3AO14802 1390 aaPredicted RBP21.22■□□□□ 0.99
FDPS-210ENST00000474345 SLC12A5Q9H2X9 1139 aa21.21■□□□□ 0.99
FDPS-210ENST00000474345 SPATA31A3Q5VYP0 1347 aa21.21■□□□□ 0.99
FDPS-210ENST00000474345 TMC1Q8TDI8 760 aa21.2■□□□□ 0.98
FDPS-210ENST00000474345 SBNO1A3KN83 1393 aa21.19■□□□□ 0.98
FDPS-210ENST00000474345 CDCA8Q53HL2 280 aa21.18■□□□□ 0.98
FDPS-210ENST00000474345 ZNF692Q9BU19 519 aaPredicted RBP21.18■□□□□ 0.98
FDPS-210ENST00000474345 PNPLA6Q8IY17 1366 aa21.18■□□□□ 0.98
FDPS-210ENST00000474345 SHPRHQ149N8 1683 aa21.17■□□□□ 0.98
FDPS-210ENST00000474345 PAK3O75914 559 aaPredicted RBP21.16■□□□□ 0.98
FDPS-210ENST00000474345 TRPM3Q9HCF6 1732 aaPredicted RBP21.15■□□□□ 0.98
FDPS-210ENST00000474345 SPATA31A6Q5VVP1 1343 aa21.15■□□□□ 0.98
FDPS-210ENST00000474345 C11orf95C9JLR9 678 aaPredicted RBP21.15■□□□□ 0.98
FDPS-210ENST00000474345 LMOD2Q6P5Q4 547 aa21.15■□□□□ 0.98
FDPS-210ENST00000474345 NUTM2BA6NNL0 878 aaPredicted RBP21.14■□□□□ 0.97
FDPS-210ENST00000474345 NUTM2EB1AL46 878 aaPredicted RBP21.14■□□□□ 0.97
FDPS-210ENST00000474345 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.97
FDPS-210ENST00000474345 NUTM2AQ8IVF1 878 aaPredicted RBP21.14■□□□□ 0.97
FDPS-210ENST00000474345 TNS3Q68CZ2 1445 aa21.13■□□□□ 0.97
FDPS-210ENST00000474345 CPSF1Q10570 1443 aaKnown RBP21.12■□□□□ 0.97
FDPS-210ENST00000474345 AKAP12Q02952 1782 aa21.11■□□□□ 0.97
FDPS-210ENST00000474345 CD163L1Q9NR16 1453 aa21.11■□□□□ 0.97
FDPS-210ENST00000474345 USP6P35125 1406 aa21.11■□□□□ 0.97
FDPS-210ENST00000474345 HDGFL2Q7Z4V5 671 aaPredicted RBP21.1■□□□□ 0.97
FDPS-210ENST00000474345 POLR3GLQ9BT43 218 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms