RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 MSS51Q4VC12 460 aa9.61□□□□□ -0.87
TMEM50B-208ENST00000474272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
TMEM50B-208ENST00000474272 Q3C1V9 767 aa9.6□□□□□ -0.87
TMEM50B-208ENST00000474272 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
TMEM50B-208ENST00000474272 ZBTB24O43167 697 aaPredicted RBP9.59□□□□□ -0.87
TMEM50B-208ENST00000474272 AAASQ9NRG9 546 aa9.59□□□□□ -0.87
TMEM50B-208ENST00000474272 DACH1Q9UI36 760 aa9.59□□□□□ -0.87
TMEM50B-208ENST00000474272 CYP4X1Q8N118 509 aa9.58□□□□□ -0.88
TMEM50B-208ENST00000474272 USB1Q9BQ65 265 aaKnown RBP9.58□□□□□ -0.88
TMEM50B-208ENST00000474272 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
TMEM50B-208ENST00000474272 TOR4AQ9NXH8 423 aa9.58□□□□□ -0.88
TMEM50B-208ENST00000474272 HOXA2O43364 376 aa9.57□□□□□ -0.88
TMEM50B-208ENST00000474272 MMP16P51512 607 aa9.57□□□□□ -0.88
TMEM50B-208ENST00000474272 CCDC24Q8N4L8 307 aa9.57□□□□□ -0.88
TMEM50B-208ENST00000474272 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
TMEM50B-208ENST00000474272 FAM217BQ9NTX9 383 aaPredicted RBP9.57□□□□□ -0.88
TMEM50B-208ENST00000474272 KRI1Q8N9T8 703 aaKnown RBP9.56□□□□□ -0.88
TMEM50B-208ENST00000474272 CLCN1P35523 988 aa9.55□□□□□ -0.88
TMEM50B-208ENST00000474272 LMOD2Q6P5Q4 547 aa9.55□□□□□ -0.88
TMEM50B-208ENST00000474272 TTC24A2A3L6 582 aaPredicted RBP9.54□□□□□ -0.88
TMEM50B-208ENST00000474272 DXOO77932 396 aaKnown RBP9.54□□□□□ -0.88
TMEM50B-208ENST00000474272 USP46P62068 366 aa9.54□□□□□ -0.88
TMEM50B-208ENST00000474272 TRIM32Q13049 653 aa9.54□□□□□ -0.88
TMEM50B-208ENST00000474272 NUTM1Q86Y26 1132 aa9.52□□□□□ -0.89
TMEM50B-208ENST00000474272 MRGPRX2Q96LB1 330 aa9.51□□□□□ -0.89
TMEM50B-208ENST00000474272 J3QL48 77 aa9.5□□□□□ -0.89
TMEM50B-208ENST00000474272 WNT7AO00755 349 aa9.5□□□□□ -0.89
TMEM50B-208ENST00000474272 SSTR3P32745 418 aaPredicted RBP9.5□□□□□ -0.89
TMEM50B-208ENST00000474272 PCDHGC3Q9UN70 934 aa9.5□□□□□ -0.89
TMEM50B-208ENST00000474272 AXIN1O15169 862 aa9.49□□□□□ -0.89
TMEM50B-208ENST00000474272 AVPP01185 164 aa9.49□□□□□ -0.89
TMEM50B-208ENST00000474272 SMPD1P17405 629 aa9.49□□□□□ -0.89
TMEM50B-208ENST00000474272 SKOR1P84550 965 aa9.49□□□□□ -0.89
TMEM50B-208ENST00000474272 NDUFV2P19404 249 aa9.48□□□□□ -0.89
TMEM50B-208ENST00000474272 GMPR2Q9P2T1 348 aaKnown RBP9.48□□□□□ -0.89
TMEM50B-208ENST00000474272 FDX1P10109 184 aa9.47□□□□□ -0.89
TMEM50B-208ENST00000474272 JUNDP17535 347 aa9.47□□□□□ -0.89
TMEM50B-208ENST00000474272 TTLL12Q14166 644 aaPredicted RBP9.47□□□□□ -0.89
TMEM50B-208ENST00000474272 PTCRAQ6ISU1 281 aaPredicted RBP9.47□□□□□ -0.89
TMEM50B-208ENST00000474272 BARGINQ6ZT62 677 aa9.47□□□□□ -0.89
TMEM50B-208ENST00000474272 SNIP1Q8TAD8 396 aaKnown RBP9.47□□□□□ -0.89
TMEM50B-208ENST00000474272 ZC3H15Q8WU90 426 aaKnown RBP9.47□□□□□ -0.89
TMEM50B-208ENST00000474272 C6orf229H3BNL8 230 aa9.46□□□□□ -0.9
TMEM50B-208ENST00000474272 ZMYND10O75800 440 aa9.46□□□□□ -0.9
TMEM50B-208ENST00000474272 RC3H1Q5TC82 1133 aaKnown RBP9.46□□□□□ -0.9
TMEM50B-208ENST00000474272 CRIPAKQ8N1N5 446 aa9.46□□□□□ -0.9
TMEM50B-208ENST00000474272 SPIRE2Q8WWL2 714 aa9.46□□□□□ -0.9
TMEM50B-208ENST00000474272 MOXD2PA6NHM9 499 aa9.44□□□□□ -0.9
TMEM50B-208ENST00000474272 RETREG3Q86VR2 466 aa9.44□□□□□ -0.9
TMEM50B-208ENST00000474272 HPS1Q92902 700 aa9.44□□□□□ -0.9
TMEM50B-208ENST00000474272 C11orf95C9JLR9 678 aaPredicted RBP9.43□□□□□ -0.9
TMEM50B-208ENST00000474272 NUDT12Q9BQG2 462 aa9.43□□□□□ -0.9
TMEM50B-208ENST00000474272 CTC1Q2NKJ3 1217 aa9.42□□□□□ -0.9
TMEM50B-208ENST00000474272 GIGYF2Q6Y7W6 1299 aaKnown RBP9.42□□□□□ -0.9
TMEM50B-208ENST00000474272 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
TMEM50B-208ENST00000474272 AMHR2Q16671 573 aa9.4□□□□□ -0.9
TMEM50B-208ENST00000474272 BEGAINQ9BUH8 593 aa9.4□□□□□ -0.9
TMEM50B-208ENST00000474272 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
TMEM50B-208ENST00000474272 MS4A1P11836 297 aa9.39□□□□□ -0.91
TMEM50B-208ENST00000474272 WNT7BP56706 349 aa9.39□□□□□ -0.91
TMEM50B-208ENST00000474272 ATP13A2Q9NQ11 1180 aa9.38□□□□□ -0.91
TMEM50B-208ENST00000474272 SNRPBP14678 240 aaKnown RBP9.37□□□□□ -0.91
TMEM50B-208ENST00000474272 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
TMEM50B-208ENST00000474272 PRR7Q8TB68 274 aa9.37□□□□□ -0.91
TMEM50B-208ENST00000474272 CCNYL3P0C7X3 344 aa9.36□□□□□ -0.91
TMEM50B-208ENST00000474272 SH3BP2P78314 561 aa9.36□□□□□ -0.91
TMEM50B-208ENST00000474272 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
TMEM50B-208ENST00000474272 PARP9Q8IXQ6 854 aa9.36□□□□□ -0.91
TMEM50B-208ENST00000474272 EHBP1Q8NDI1 1231 aa9.36□□□□□ -0.91
TMEM50B-208ENST00000474272 TBC1D2Q9BYX2 928 aa9.36□□□□□ -0.91
TMEM50B-208ENST00000474272 PCDHB15Q9Y5E8 787 aa9.36□□□□□ -0.91
TMEM50B-208ENST00000474272 TRIM66O15016 1216 aa9.35□□□□□ -0.91
TMEM50B-208ENST00000474272 SIAH2O43255 324 aa9.35□□□□□ -0.91
TMEM50B-208ENST00000474272 LCE2AQ5TA79 106 aaPredicted RBP9.35□□□□□ -0.91
TMEM50B-208ENST00000474272 MTMR2Q13614 643 aa9.34□□□□□ -0.91
TMEM50B-208ENST00000474272 BAP1Q92560 729 aa9.34□□□□□ -0.91
TMEM50B-208ENST00000474272 UNC93B1Q9H1C4 597 aa9.34□□□□□ -0.91
TMEM50B-208ENST00000474272 PTPRNQ16849 979 aa9.33□□□□□ -0.92
TMEM50B-208ENST00000474272 EVA1BQ9NVM1 165 aa9.33□□□□□ -0.92
TMEM50B-208ENST00000474272 KCNH2Q12809 1159 aa9.31□□□□□ -0.92
TMEM50B-208ENST00000474272 CSPP1Q1MSJ5 1256 aa9.31□□□□□ -0.92
TMEM50B-208ENST00000474272 RSBN1LQ6PCB5 846 aaPredicted RBP9.31□□□□□ -0.92
TMEM50B-208ENST00000474272 CFAP99D6REC4 459 aa9.3□□□□□ -0.92
TMEM50B-208ENST00000474272 WFS1O76024 890 aa9.3□□□□□ -0.92
TMEM50B-208ENST00000474272 WASF2Q9Y6W5 498 aa9.3□□□□□ -0.92
TMEM50B-208ENST00000474272 CABLES1Q8TDN4 633 aa9.29□□□□□ -0.92
TMEM50B-208ENST00000474272 TRIM47Q96LD4 638 aa9.29□□□□□ -0.92
TMEM50B-208ENST00000474272 AK7Q96M32 723 aa9.29□□□□□ -0.92
TMEM50B-208ENST00000474272 TLL2Q9Y6L7 1015 aa9.29□□□□□ -0.92
TMEM50B-208ENST00000474272 BMP1P13497 986 aa9.28□□□□□ -0.92
TMEM50B-208ENST00000474272 HRCP23327 699 aa9.28□□□□□ -0.92
TMEM50B-208ENST00000474272 CTHP32929 405 aa9.28□□□□□ -0.92
TMEM50B-208ENST00000474272 NFX1Q12986 1120 aaKnown RBP9.28□□□□□ -0.92
TMEM50B-208ENST00000474272 SPDYE5A6NIY4 337 aa9.27□□□□□ -0.93
TMEM50B-208ENST00000474272 SPTLC1O15269 473 aa9.27□□□□□ -0.93
TMEM50B-208ENST00000474272 RIC3Q7Z5B4 369 aa9.27□□□□□ -0.93
TMEM50B-208ENST00000474272 ZNF511Q8NB15 262 aa9.27□□□□□ -0.93
TMEM50B-208ENST00000474272 CAPN5O15484 640 aaPredicted RBP9.26□□□□□ -0.93
TMEM50B-208ENST00000474272 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
TMEM50B-208ENST00000474272 DESI1Q6ICB0 168 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms