RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ADH1BP00325 375 aa8.9□□□□□ -0.98
ATPAF1-204ENST00000474020 CLCN1P35523 988 aa8.9□□□□□ -0.98
ATPAF1-204ENST00000474020 MORN1Q5T089 497 aa8.9□□□□□ -0.98
ATPAF1-204ENST00000474020 GPCPD1Q9NPB8 672 aa8.9□□□□□ -0.98
ATPAF1-204ENST00000474020 PRDM2Q13029 1718 aa8.89□□□□□ -0.99
ATPAF1-204ENST00000474020 PRKD2Q9BZL6 878 aa8.89□□□□□ -0.99
ATPAF1-204ENST00000474020 V9GY48 417 aaPredicted RBP8.89□□□□□ -0.99
ATPAF1-204ENST00000474020 ERICH3Q5RHP9 1530 aa8.89□□□□□ -0.99
ATPAF1-204ENST00000474020 CC2D2AQ9P2K1 1620 aa8.87□□□□□ -0.99
ATPAF1-204ENST00000474020 CADPSQ9ULU8 1353 aa8.87□□□□□ -0.99
ATPAF1-204ENST00000474020 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
ATPAF1-204ENST00000474020 S1PR4O95977 384 aa8.87□□□□□ -0.99
ATPAF1-204ENST00000474020 GRIPAP1Q4V328 841 aa8.87□□□□□ -0.99
ATPAF1-204ENST00000474020 FAM217BQ9NTX9 383 aaPredicted RBP8.87□□□□□ -0.99
ATPAF1-204ENST00000474020 SLC24A1O60721 1099 aa8.86□□□□□ -0.99
ATPAF1-204ENST00000474020 SPSB2Q99619 263 aa8.86□□□□□ -0.99
ATPAF1-204ENST00000474020 SLC6A16Q9GZN6 736 aa8.86□□□□□ -0.99
ATPAF1-204ENST00000474020 SLC27A5Q9Y2P5 690 aa8.86□□□□□ -0.99
ATPAF1-204ENST00000474020 CUX1P39880 1505 aa8.85□□□□□ -0.99
ATPAF1-204ENST00000474020 KDM4AO75164 1064 aa8.85□□□□□ -0.99
ATPAF1-204ENST00000474020 LAPTM4AQ15012 233 aa8.85□□□□□ -0.99
ATPAF1-204ENST00000474020 PPARGC1BQ86YN6 1023 aaKnown RBP8.85□□□□□ -0.99
ATPAF1-204ENST00000474020 ANKLE1Q8NAG6 615 aa8.85□□□□□ -0.99
ATPAF1-204ENST00000474020 THAP11Q96EK4 314 aa8.85□□□□□ -0.99
ATPAF1-204ENST00000474020 SALL2Q9Y467 1007 aaPredicted RBP8.85□□□□□ -0.99
ATPAF1-204ENST00000474020 VPS8Q8N3P4 1428 aa8.85□□□□□ -0.99
ATPAF1-204ENST00000474020 AMHR2Q16671 573 aa8.84□□□□□ -0.99
ATPAF1-204ENST00000474020 CCER1Q8TC90 406 aaPredicted RBP8.84□□□□□ -0.99
ATPAF1-204ENST00000474020 REPIN1Q9BWE0 567 aaKnown RBP8.84□□□□□ -0.99
ATPAF1-204ENST00000474020 RAPGEF2Q9Y4G8 1499 aa8.83□□□□□ -1
ATPAF1-204ENST00000474020 FMNL1O95466 1100 aaPredicted RBP8.83□□□□□ -1
ATPAF1-204ENST00000474020 PRXQ9BXM0 1461 aa8.83□□□□□ -1
ATPAF1-204ENST00000474020 PPEF1O14829 653 aaPredicted RBP8.82□□□□□ -1
ATPAF1-204ENST00000474020 USP46P62068 366 aa8.82□□□□□ -1
ATPAF1-204ENST00000474020 BRICD5Q6PL45 260 aa8.82□□□□□ -1
ATPAF1-204ENST00000474020 Q6ZNB5 142 aa8.82□□□□□ -1
ATPAF1-204ENST00000474020 TTLL12Q14166 644 aaPredicted RBP8.81□□□□□ -1
ATPAF1-204ENST00000474020 Q3C1V9 767 aa8.8□□□□□ -1
ATPAF1-204ENST00000474020 RNF19BQ6ZMZ0 732 aa8.8□□□□□ -1
ATPAF1-204ENST00000474020 TTBK1Q5TCY1 1321 aaPredicted RBP8.8□□□□□ -1
ATPAF1-204ENST00000474020 HOXA2O43364 376 aa8.79□□□□□ -1
ATPAF1-204ENST00000474020 SSTR3P32745 418 aaPredicted RBP8.79□□□□□ -1
ATPAF1-204ENST00000474020 SLC19A1P41440 591 aa8.79□□□□□ -1
ATPAF1-204ENST00000474020 FAM160A2Q8N612 972 aaPredicted RBP8.79□□□□□ -1
ATPAF1-204ENST00000474020 EMID1Q96A84 441 aaPredicted RBP8.79□□□□□ -1
ATPAF1-204ENST00000474020 AK7Q96M32 723 aa8.79□□□□□ -1
ATPAF1-204ENST00000474020 CUX2O14529 1486 aa8.78□□□□□ -1
ATPAF1-204ENST00000474020 TRIM66O15016 1216 aa8.78□□□□□ -1
ATPAF1-204ENST00000474020 MSS51Q4VC12 460 aa8.78□□□□□ -1
ATPAF1-204ENST00000474020 GIGYF2Q6Y7W6 1299 aaKnown RBP8.78□□□□□ -1
ATPAF1-204ENST00000474020 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1
ATPAF1-204ENST00000474020 GFRA3O60609 400 aa8.77□□□□□ -1.01
ATPAF1-204ENST00000474020 NUTM1Q86Y26 1132 aa8.77□□□□□ -1.01
ATPAF1-204ENST00000474020 HLA-CQ95604 372 aa8.77□□□□□ -1.01
ATPAF1-204ENST00000474020 BCANQ96GW7 911 aa8.77□□□□□ -1.01
ATPAF1-204ENST00000474020 NRG2O14511 850 aaPredicted RBP8.76□□□□□ -1.01
ATPAF1-204ENST00000474020 RANGAP1P46060 587 aaPredicted RBP8.76□□□□□ -1.01
ATPAF1-204ENST00000474020 PLA2G2CQ5R387 149 aa8.76□□□□□ -1.01
ATPAF1-204ENST00000474020 SPRYD7Q5W111 196 aa8.76□□□□□ -1.01
ATPAF1-204ENST00000474020 LIAT1Q6ZQX7 453 aa8.76□□□□□ -1.01
ATPAF1-204ENST00000474020 FGD5Q6ZNL6 1462 aa8.76□□□□□ -1.01
ATPAF1-204ENST00000474020 DNMBPQ6XZF7 1577 aa8.75□□□□□ -1.01
ATPAF1-204ENST00000474020 PARP9Q8IXQ6 854 aa8.75□□□□□ -1.01
ATPAF1-204ENST00000474020 PRDM9Q9NQV7 894 aa8.75□□□□□ -1.01
ATPAF1-204ENST00000474020 ZNF598Q86UK7 904 aaKnown RBP8.74□□□□□ -1.01
ATPAF1-204ENST00000474020 FCF1Q9Y324 198 aaKnown RBP8.74□□□□□ -1.01
ATPAF1-204ENST00000474020 LAMC3Q9Y6N6 1575 aa8.73□□□□□ -1.01
ATPAF1-204ENST00000474020 GUCA2AQ02747 115 aa8.73□□□□□ -1.01
ATPAF1-204ENST00000474020 USB1Q9BQ65 265 aaKnown RBP8.73□□□□□ -1.01
ATPAF1-204ENST00000474020 SLC24A3Q9HC58 644 aa8.73□□□□□ -1.01
ATPAF1-204ENST00000474020 PDZRN3Q9UPQ7 1066 aa8.73□□□□□ -1.01
ATPAF1-204ENST00000474020 MMP16P51512 607 aa8.72□□□□□ -1.01
ATPAF1-204ENST00000474020 SPIRE2Q8WWL2 714 aa8.72□□□□□ -1.01
ATPAF1-204ENST00000474020 BEGAINQ9BUH8 593 aa8.72□□□□□ -1.01
ATPAF1-204ENST00000474020 CARMIL1Q5VZK9 1371 aa8.72□□□□□ -1.01
ATPAF1-204ENST00000474020 PDS5BQ9NTI5 1447 aa8.71□□□□□ -1.01
ATPAF1-204ENST00000474020 RPIAP49247 311 aa8.71□□□□□ -1.02
ATPAF1-204ENST00000474020 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.02
ATPAF1-204ENST00000474020 ARAP1Q96P48 1450 aa8.7□□□□□ -1.02
ATPAF1-204ENST00000474020 FDX1P10109 184 aa8.7□□□□□ -1.02
ATPAF1-204ENST00000474020 PDE4DQ08499 809 aa8.7□□□□□ -1.02
ATPAF1-204ENST00000474020 TRIM67Q6ZTA4 783 aa8.7□□□□□ -1.02
ATPAF1-204ENST00000474020 IGF1RP08069 1367 aa8.7□□□□□ -1.02
ATPAF1-204ENST00000474020 ABCA10Q8WWZ4 1543 aa8.7□□□□□ -1.02
ATPAF1-204ENST00000474020 TOPBP1Q92547 1522 aa8.7□□□□□ -1.02
ATPAF1-204ENST00000474020 DXOO77932 396 aaKnown RBP8.69□□□□□ -1.02
ATPAF1-204ENST00000474020 MS4A1P11836 297 aa8.69□□□□□ -1.02
ATPAF1-204ENST00000474020 DIXDC1Q155Q3 683 aa8.69□□□□□ -1.02
ATPAF1-204ENST00000474020 MOXD2PA6NHM9 499 aa8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 PRR20EP86478 221 aa8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 PRR20CP86479 221 aa8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 PRR20DP86480 221 aa8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 PRR20BP86481 221 aa8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 PRR20AP86496 221 aa8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 RETREG3Q86VR2 466 aa8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 SYMPKQ92797 1274 aaKnown RBP8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 PCDHGC3Q9UN70 934 aa8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 FHAD1B1AJZ9 1412 aa8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 CUL7Q14999 1698 aa8.68□□□□□ -1.02
ATPAF1-204ENST00000474020 NDUFV2P19404 249 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms