RNA–Protein interactions for RNA: ENST00000473680.1

PNCK-225, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,232 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-225	ENST00000473680	ESCO1	Q5FWF5	840 aa		32.02	■■■□□ 2.72
PNCK-225	ENST00000473680	ABCC11	Q96J66	1382 aa		32.01	■■■□□ 2.71
PNCK-225	ENST00000473680	TECPR2	O15040	1411 aa		32	■■■□□ 2.71
PNCK-225	ENST00000473680	AFF2	P51816	1311 aa		32	■■■□□ 2.71
PNCK-225	ENST00000473680	SOS2	Q07890	1332 aa	Predicted RBP	32	■■■□□ 2.71
PNCK-225	ENST00000473680	CDC42BPG	Q6DT37	1551 aa		31.99	■■■□□ 2.71
PNCK-225	ENST00000473680	C8orf37	Q96NL8	207 aa		31.99	■■■□□ 2.71
PNCK-225	ENST00000473680	RXRB	P28702	533 aa		31.97	■■■□□ 2.71
PNCK-225	ENST00000473680	C14orf93	Q9H972	538 aa	Known RBP	31.97	■■■□□ 2.71
PNCK-225	ENST00000473680	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.97	■■■□□ 2.71
PNCK-225	ENST00000473680	NUTM2F	A1L443	756 aa		31.96	■■■□□ 2.71
PNCK-225	ENST00000473680	LAMC1	P11047	1609 aa		31.95	■■■□□ 2.71
PNCK-225	ENST00000473680	PLEKHH1	Q9ULM0	1364 aa		31.94	■■■□□ 2.7
PNCK-225	ENST00000473680	ADAMTS2	O95450	1211 aa		31.94	■■■□□ 2.7
PNCK-225	ENST00000473680	CFAP70	Q5T0N1	1121 aa		31.94	■■■□□ 2.7
PNCK-225	ENST00000473680	NPHP3	Q7Z494	1330 aa		31.94	■■■□□ 2.7
PNCK-225	ENST00000473680	DHX57	Q6P158	1386 aa	Known RBP	31.93	■■■□□ 2.7
PNCK-225	ENST00000473680	MYOM2	P54296	1465 aa		31.92	■■■□□ 2.7
PNCK-225	ENST00000473680	KNDC1	Q76NI1	1749 aa		31.91	■■■□□ 2.7
PNCK-225	ENST00000473680	FOXO3	O43524	673 aa		31.9	■■■□□ 2.7
PNCK-225	ENST00000473680	NGLY1	Q96IV0	654 aa		31.9	■■■□□ 2.7
PNCK-225	ENST00000473680	NRXN1	Q9ULB1	1477 aa		31.9	■■■□□ 2.7
PNCK-225	ENST00000473680	SIRT1	Q96EB6	747 aa		31.89	■■■□□ 2.7
PNCK-225	ENST00000473680	XPC	Q01831	940 aa	Predicted RBP	31.87	■■■□□ 2.69
PNCK-225	ENST00000473680	QTRT2	Q9H974	415 aa	Known RBP	31.86	■■■□□ 2.69
PNCK-225	ENST00000473680	HRC	P23327	699 aa		31.85	■■■□□ 2.69
PNCK-225	ENST00000473680	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.83	■■■□□ 2.69
PNCK-225	ENST00000473680	KDM2A	Q9Y2K7	1162 aa		31.83	■■■□□ 2.69
PNCK-225	ENST00000473680	PRAM1	Q96QH2	718 aa		31.82	■■■□□ 2.68
PNCK-225	ENST00000473680	PXDN	Q92626	1479 aa		31.81	■■■□□ 2.68
PNCK-225	ENST00000473680	DCAF11	Q8TEB1	546 aa		31.81	■■■□□ 2.68
PNCK-225	ENST00000473680	POGK	Q9P215	609 aa		31.81	■■■□□ 2.68
PNCK-225	ENST00000473680	RBM6	P78332	1123 aa	Known RBP	31.8	■■■□□ 2.68
PNCK-225	ENST00000473680	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.78	■■■□□ 2.68
PNCK-225	ENST00000473680	USP21	Q9UK80	565 aa		31.78	■■■□□ 2.68
PNCK-225	ENST00000473680	FMN2	Q9NZ56	1722 aa		31.78	■■■□□ 2.68
PNCK-225	ENST00000473680	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.75	■■■□□ 2.67
PNCK-225	ENST00000473680	KRT28	Q7Z3Y7	464 aa		31.73	■■■□□ 2.67
PNCK-225	ENST00000473680	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.73	■■■□□ 2.67
PNCK-225	ENST00000473680	PHF8	Q9UPP1	1060 aa		31.73	■■■□□ 2.67
PNCK-225	ENST00000473680	TRAK1	Q9UPV9	953 aa		31.73	■■■□□ 2.67
PNCK-225	ENST00000473680	STAC3	Q96MF2	364 aa		31.72	■■■□□ 2.67
PNCK-225	ENST00000473680	KIF1A	Q12756	1690 aa		31.72	■■■□□ 2.67
PNCK-225	ENST00000473680	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.71	■■■□□ 2.67
PNCK-225	ENST00000473680	TRPC5	Q9UL62	973 aa	Predicted RBP	31.71	■■■□□ 2.67
PNCK-225	ENST00000473680	DLC1	Q96QB1	1528 aa		31.7	■■■□□ 2.67
PNCK-225	ENST00000473680	PSME1	Q06323	249 aa		31.69	■■■□□ 2.66
PNCK-225	ENST00000473680	SPATA31A3	Q5VYP0	1347 aa		31.69	■■■□□ 2.66
PNCK-225	ENST00000473680	RGS12	O14924	1447 aa		31.68	■■■□□ 2.66
PNCK-225	ENST00000473680	ADGRB1	O14514	1584 aa		31.68	■■■□□ 2.66
PNCK-225	ENST00000473680	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.65	■■■□□ 2.66
PNCK-225	ENST00000473680	HAP1	P54257	671 aa	Predicted RBP	31.63	■■■□□ 2.65
PNCK-225	ENST00000473680	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.63	■■■□□ 2.65
PNCK-225	ENST00000473680	RGPD8	O14715	1765 aa	Predicted RBP	31.61	■■■□□ 2.65
PNCK-225	ENST00000473680	ANKAR	Q7Z5J8	1434 aa		31.61	■■■□□ 2.65
PNCK-225	ENST00000473680	LMOD2	Q6P5Q4	547 aa		31.61	■■■□□ 2.65
PNCK-225	ENST00000473680	PMFBP1	Q8TBY8	1022 aa		31.61	■■■□□ 2.65
PNCK-225	ENST00000473680	PLEKHG5	O94827	1062 aa		31.6	■■■□□ 2.65
PNCK-225	ENST00000473680	ATRN	O75882	1429 aa		31.59	■■■□□ 2.65
PNCK-225	ENST00000473680	TNS3	Q68CZ2	1445 aa		31.58	■■■□□ 2.65
PNCK-225	ENST00000473680	EIF3A	Q14152	1382 aa	Known RBP	31.57	■■■□□ 2.64
PNCK-225	ENST00000473680	ADGRB2	O60241	1585 aa		31.57	■■■□□ 2.64
PNCK-225	ENST00000473680	BCL9L	Q86UU0	1499 aa		31.56	■■■□□ 2.64
PNCK-225	ENST00000473680	SBNO1	A3KN83	1393 aa		31.56	■■■□□ 2.64
PNCK-225	ENST00000473680	MARF1	Q9Y4F3	1742 aa	Known RBP	31.55	■■■□□ 2.64
PNCK-225	ENST00000473680	WASL	O00401	505 aa	Predicted RBP	31.54	■■■□□ 2.64
PNCK-225	ENST00000473680	CABLES1	Q8TDN4	633 aa		31.54	■■■□□ 2.64
PNCK-225	ENST00000473680	ARHGEF10	O15013	1369 aa		31.53	■■■□□ 2.64
PNCK-225	ENST00000473680	USP32	Q8NFA0	1604 aa		31.52	■■■□□ 2.64
PNCK-225	ENST00000473680	UNC5CL	Q8IV45	518 aa		31.51	■■■□□ 2.63
PNCK-225	ENST00000473680	GJD4	Q96KN9	370 aa	Predicted RBP	31.51	■■■□□ 2.63
PNCK-225	ENST00000473680	GPRASP1	Q5JY77	1395 aa		31.5	■■■□□ 2.63
PNCK-225	ENST00000473680	ATAD2	Q6PL18	1390 aa		31.5	■■■□□ 2.63
PNCK-225	ENST00000473680	TULP4	Q9NRJ4	1543 aa		31.49	■■■□□ 2.63
PNCK-225	ENST00000473680	PRR36	Q9H6K5	1346 aa		31.49	■■■□□ 2.63
PNCK-225	ENST00000473680	NGDN	Q8NEJ9	315 aa	Known RBP	31.47	■■■□□ 2.63
PNCK-225	ENST00000473680	SLIT2	O94813	1529 aa		31.45	■■■□□ 2.63
PNCK-225	ENST00000473680	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.41	■■■□□ 2.62
PNCK-225	ENST00000473680	PAK3	O75914	559 aa	Predicted RBP	31.41	■■■□□ 2.62
PNCK-225	ENST00000473680	NUDT16	Q96DE0	195 aa	Known RBP	31.4	■■■□□ 2.62
PNCK-225	ENST00000473680	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.4	■■■□□ 2.62
PNCK-225	ENST00000473680	CCDC9	Q9Y3X0	531 aa	Known RBP	31.39	■■■□□ 2.62
PNCK-225	ENST00000473680	RALGAPB	Q86X10	1494 aa		31.39	■■■□□ 2.62
PNCK-225	ENST00000473680	CDK19	Q9BWU1	502 aa		31.38	■■■□□ 2.61
PNCK-225	ENST00000473680	NBPF1	Q3BBV0	1214 aa		31.37	■■■□□ 2.61
PNCK-225	ENST00000473680	FAM83G	A6ND36	823 aa		31.36	■■■□□ 2.61
PNCK-225	ENST00000473680	KIAA1210	Q9ULL0	1709 aa		31.35	■■■□□ 2.61
PNCK-225	ENST00000473680	VPS72	Q15906	364 aa		31.35	■■■□□ 2.61
PNCK-225	ENST00000473680	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.35	■■■□□ 2.61
PNCK-225	ENST00000473680	ATP7B	P35670	1465 aa		31.33	■■■□□ 2.61
PNCK-225	ENST00000473680	ABCA3	Q99758	1704 aa		31.33	■■■□□ 2.61
PNCK-225	ENST00000473680	GLI3	P10071	1580 aa		31.32	■■■□□ 2.6
PNCK-225	ENST00000473680	PLCH1	Q4KWH8	1693 aa		31.3	■■■□□ 2.6
PNCK-225	ENST00000473680	ITSN1	Q15811	1721 aa		31.29	■■■□□ 2.6
PNCK-225	ENST00000473680	ALS2	Q96Q42	1657 aa		31.29	■■■□□ 2.6
PNCK-225	ENST00000473680	CCDC61	Q9Y6R9	512 aa		31.29	■■■□□ 2.6
PNCK-225	ENST00000473680	NWD2	Q9ULI1	1742 aa		31.29	■■■□□ 2.6
PNCK-225	ENST00000473680	CCDC125	Q86Z20	511 aa		31.28	■■■□□ 2.6
PNCK-225	ENST00000473680	SEPT12	Q8IYM1	358 aa		31.28	■■■□□ 2.6
PNCK-225	ENST00000473680	L3MBTL2	Q969R5	705 aa		31.28	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms