RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 NUP133Q8WUM0 1156 aa9.88□□□□□ -0.83
CDK5RAP2-209ENST00000473282 TPM1P09493 284 aa9.88□□□□□ -0.83
CDK5RAP2-209ENST00000473282 ZBTB17Q13105 803 aa9.88□□□□□ -0.83
CDK5RAP2-209ENST00000473282 FOXD4L5Q5VV16 416 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP2-209ENST00000473282 FOXD4L4Q8WXT5 416 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP2-209ENST00000473282 STK26Q9P289 416 aa9.88□□□□□ -0.83
CDK5RAP2-209ENST00000473282 ROCK2O75116 1388 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP2-209ENST00000473282 CFAP57Q96MR6 1250 aa9.88□□□□□ -0.83
CDK5RAP2-209ENST00000473282 PPFIBP2Q8ND30 876 aa9.87□□□□□ -0.83
CDK5RAP2-209ENST00000473282 KIF3CO14782 793 aa9.87□□□□□ -0.83
CDK5RAP2-209ENST00000473282 TRERF1Q96PN7 1200 aa9.87□□□□□ -0.83
CDK5RAP2-209ENST00000473282 NAP1L4Q99733 375 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP2-209ENST00000473282 MSH5O43196 834 aa9.87□□□□□ -0.83
CDK5RAP2-209ENST00000473282 MAP3K7CLP57077 242 aa9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 SLC26A8Q96RN1 970 aa9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 BRPF3Q9ULD4 1205 aa9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 CCDC181Q5TID7 509 aa9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 TOMM22Q9NS69 142 aa9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 ATAD2BQ9ULI0 1458 aa9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 APBB1O00213 710 aa9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 IBSPP21815 317 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 RNF214Q8ND24 703 aa9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 SATB2Q9UPW6 733 aa9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 FRMD4BQ9Y2L6 1034 aa9.86□□□□□ -0.83
CDK5RAP2-209ENST00000473282 ITPRIPQ8IWB1 547 aa9.85□□□□□ -0.83
CDK5RAP2-209ENST00000473282 ANKRD20A12PQ8NF67 263 aa9.85□□□□□ -0.83
CDK5RAP2-209ENST00000473282 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
CDK5RAP2-209ENST00000473282 GTPBP4Q9BZE4 634 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP2-209ENST00000473282 CADPSQ9ULU8 1353 aa9.85□□□□□ -0.83
CDK5RAP2-209ENST00000473282 SKOR2Q2VWA4 1001 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP2-209ENST00000473282 KTN1Q86UP2 1357 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP2-209ENST00000473282 UQCRHLA0A096LP55 91 aa9.85□□□□□ -0.83
CDK5RAP2-209ENST00000473282 UQCRHP07919 91 aa9.85□□□□□ -0.83
CDK5RAP2-209ENST00000473282 MS4A1P11836 297 aa9.85□□□□□ -0.83
CDK5RAP2-209ENST00000473282 MAP2K2P36507 400 aa9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 WHAMMQ8TF30 809 aa9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 ANKRD30AQ9BXX3 1397 aa9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 HNRNPMP52272 730 aaKnown RBP eCLIP9.84□□□□□ -0.833e-6■■■■□ 24.2
CDK5RAP2-209ENST00000473282 FOXD4L6Q3SYB3 417 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 FOXD4L3Q6VB84 417 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 DAAM2Q86T65 1068 aa9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 RPUSD2Q8IZ73 545 aaKnown RBP9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 MPHOSPH9Q99550 1183 aa9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 KIF3BO15066 747 aa9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 ZCRB1Q8TBF4 217 aaKnown RBP9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 GOPCQ9HD26 462 aa9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 FANCD2Q9BXW9 1451 aa9.84□□□□□ -0.83
CDK5RAP2-209ENST00000473282 NUP155O75694 1391 aa9.83□□□□□ -0.84
CDK5RAP2-209ENST00000473282 OFD1O75665 1012 aa9.83□□□□□ -0.84
CDK5RAP2-209ENST00000473282 VIMP08670 466 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP2-209ENST00000473282 HDGFP51858 240 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP2-209ENST00000473282 CBX1P83916 185 aa9.83□□□□□ -0.84
CDK5RAP2-209ENST00000473282 INF2Q27J81 1249 aa9.83□□□□□ -0.84
CDK5RAP2-209ENST00000473282 AEBP2Q6ZN18 517 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP2-209ENST00000473282 C10orf67Q8IYJ2 551 aa9.83□□□□□ -0.84
CDK5RAP2-209ENST00000473282 BLVRAP53004 296 aa9.83□□□□□ -0.84
CDK5RAP2-209ENST00000473282 FMNL3Q8IVF7 1028 aa9.83□□□□□ -0.84
CDK5RAP2-209ENST00000473282 CSB-PGBD3P0DP91 1061 aa9.82□□□□□ -0.84
CDK5RAP2-209ENST00000473282 CCDC18Q5T9S5 1454 aa9.82□□□□□ -0.84
CDK5RAP2-209ENST00000473282 RPAINQ86UA6 219 aa9.82□□□□□ -0.84
CDK5RAP2-209ENST00000473282 NUCKS1Q9H1E3 243 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP2-209ENST00000473282 SLKQ9H2G2 1235 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP2-209ENST00000473282 JAKMIP3Q5VZ66 844 aa9.82□□□□□ -0.84
CDK5RAP2-209ENST00000473282 SPRYD3Q8NCJ5 442 aa9.82□□□□□ -0.84
CDK5RAP2-209ENST00000473282 RUSC2Q8N2Y8 1516 aa9.82□□□□□ -0.84
CDK5RAP2-209ENST00000473282 CIZ1Q9ULV3 898 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP2-209ENST00000473282 SAMD1Q6SPF0 538 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP2-209ENST00000473282 SYCP1Q15431 976 aa9.81□□□□□ -0.84
CDK5RAP2-209ENST00000473282 ZC4H2Q9NQZ6 224 aa9.81□□□□□ -0.84
CDK5RAP2-209ENST00000473282 A0A1B0GUA9 196 aa9.81□□□□□ -0.84
CDK5RAP2-209ENST00000473282 NUTM2DQ5VT03 806 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP2-209ENST00000473282 CCDC39Q9UFE4 941 aa9.81□□□□□ -0.84
CDK5RAP2-209ENST00000473282 PDCD7Q8N8D1 485 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP2-209ENST00000473282 RBM33Q96EV2 1170 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP2-209ENST00000473282 RBBP5Q15291 538 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP2-209ENST00000473282 USP6NLQ92738 828 aa9.8□□□□□ -0.84
CDK5RAP2-209ENST00000473282 PRDM2Q13029 1718 aa9.8□□□□□ -0.84
CDK5RAP2-209ENST00000473282 SECISBP2LQ93073 1101 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP2-209ENST00000473282 CCDC144CPQ8IYA2 1237 aa9.8□□□□□ -0.84
CDK5RAP2-209ENST00000473282 WDHD1O75717 1129 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 CCDC92Q53HC0 331 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 HDGFL2Q7Z4V5 671 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 ATP6V1E2Q96A05 226 aa9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 TTC31Q49AM3 519 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 SEPT8Q92599 483 aa9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 RNF8O76064 485 aa9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 SMAP1Q8IYB5 467 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 MRE11P49959 708 aa9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 EFCAB2Q5VUJ9 269 aa9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 KRI1Q8N9T8 703 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP2-209ENST00000473282 EIF3AQ14152 1382 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP2-209ENST00000473282 EIF3JO75822 258 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP2-209ENST00000473282 PRM3Q9NNZ6 103 aa9.78□□□□□ -0.84
CDK5RAP2-209ENST00000473282 CT47B1P0C2W7 299 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP2-209ENST00000473282 ZNF853P0CG23 659 aa9.78□□□□□ -0.84
CDK5RAP2-209ENST00000473282 SKIDA1Q1XH10 827 aa9.78□□□□□ -0.84
CDK5RAP2-209ENST00000473282 GBP6Q6ZN66 633 aa9.78□□□□□ -0.84
CDK5RAP2-209ENST00000473282 CERS3Q8IU89 383 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms