RNA–Protein interactions for RNA: ENST00000472822.5

KDM5B-207, Transcript of lysine demethylase 5B, humanhuman

TSL 1 (best)

Gene KDM5B, Length 1,648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-207ENST00000472822 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
KDM5B-207ENST00000472822 CHD2O14647 1828 aaKnown RBP12.74□□□□□ -0.37
KDM5B-207ENST00000472822 FAM135BQ49AJ0 1406 aa12.73□□□□□ -0.37
KDM5B-207ENST00000472822 POLR3GLQ9BT43 218 aa12.73□□□□□ -0.37
KDM5B-207ENST00000472822 POGKQ9P215 609 aa12.73□□□□□ -0.37
KDM5B-207ENST00000472822 PIK3R4Q99570 1358 aa12.72□□□□□ -0.37
KDM5B-207ENST00000472822 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
KDM5B-207ENST00000472822 KCNA6P17658 529 aa12.72□□□□□ -0.37
KDM5B-207ENST00000472822 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.72□□□□□ -0.37
KDM5B-207ENST00000472822 MYOM1P52179 1685 aa12.7□□□□□ -0.38
KDM5B-207ENST00000472822 MIER1Q8N108 512 aa12.7□□□□□ -0.38
KDM5B-207ENST00000472822 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
KDM5B-207ENST00000472822 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
KDM5B-207ENST00000472822 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
KDM5B-207ENST00000472822 EVC2Q86UK5 1308 aa12.68□□□□□ -0.38
KDM5B-207ENST00000472822 PER1O15534 1290 aaPredicted RBP12.67□□□□□ -0.38
KDM5B-207ENST00000472822 CDCA8Q53HL2 280 aa12.67□□□□□ -0.38
KDM5B-207ENST00000472822 PUS7Q96PZ0 661 aaKnown RBP12.67□□□□□ -0.38
KDM5B-207ENST00000472822 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
KDM5B-207ENST00000472822 STRCP1A6NGW2 1772 aa12.67□□□□□ -0.38
KDM5B-207ENST00000472822 NWD1Q149M9 1564 aa12.67□□□□□ -0.38
KDM5B-207ENST00000472822 PANK3Q9H999 370 aa12.66□□□□□ -0.38
KDM5B-207ENST00000472822 WASLO00401 505 aaPredicted RBP12.66□□□□□ -0.38
KDM5B-207ENST00000472822 SLC12A5Q9H2X9 1139 aa12.66□□□□□ -0.38
KDM5B-207ENST00000472822 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
KDM5B-207ENST00000472822 ADGRB2O60241 1585 aa12.65□□□□□ -0.39
KDM5B-207ENST00000472822 SRPK2P78362 688 aaKnown RBP12.63□□□□□ -0.39
KDM5B-207ENST00000472822 CARD14Q9BXL6 1004 aa12.63□□□□□ -0.39
KDM5B-207ENST00000472822 PRR36Q9H6K5 1346 aa12.63□□□□□ -0.39
KDM5B-207ENST00000472822 NALCNQ8IZF0 1738 aa12.61□□□□□ -0.39
KDM5B-207ENST00000472822 CD163L1Q9NR16 1453 aa12.61□□□□□ -0.39
KDM5B-207ENST00000472822 USP32Q8NFA0 1604 aa12.61□□□□□ -0.39
KDM5B-207ENST00000472822 ATP7BP35670 1465 aa12.6□□□□□ -0.39
KDM5B-207ENST00000472822 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
KDM5B-207ENST00000472822 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
KDM5B-207ENST00000472822 ATAD2Q6PL18 1390 aa12.59□□□□□ -0.39
KDM5B-207ENST00000472822 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
KDM5B-207ENST00000472822 NKTRP30414 1462 aaKnown RBP12.59□□□□□ -0.39
KDM5B-207ENST00000472822 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
KDM5B-207ENST00000472822 PRKRIP1Q9H875 184 aaPredicted RBP12.59□□□□□ -0.39
KDM5B-207ENST00000472822 RGPD8O14715 1765 aaPredicted RBP12.58□□□□□ -0.4
KDM5B-207ENST00000472822 ZNF335Q9H4Z2 1342 aaPredicted RBP12.58□□□□□ -0.4
KDM5B-207ENST00000472822 NUTM2FA1L443 756 aa12.58□□□□□ -0.4
KDM5B-207ENST00000472822 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
KDM5B-207ENST00000472822 ADGRL3Q9HAR2 1447 aa12.57□□□□□ -0.4
KDM5B-207ENST00000472822 ANP32CO43423 234 aa12.57□□□□□ -0.4
KDM5B-207ENST00000472822 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
KDM5B-207ENST00000472822 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
KDM5B-207ENST00000472822 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
KDM5B-207ENST00000472822 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
KDM5B-207ENST00000472822 ANKRD36BQ8N2N9 1353 aa12.56□□□□□ -0.4
KDM5B-207ENST00000472822 CDC42BPGQ6DT37 1551 aa12.56□□□□□ -0.4
KDM5B-207ENST00000472822 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
KDM5B-207ENST00000472822 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
KDM5B-207ENST00000472822 TMEM94Q12767 1356 aa12.56□□□□□ -0.4
KDM5B-207ENST00000472822 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
KDM5B-207ENST00000472822 CNGB1Q14028 1251 aaPredicted RBP12.55□□□□□ -0.4
KDM5B-207ENST00000472822 CCDC184Q52MB2 194 aa12.55□□□□□ -0.4
KDM5B-207ENST00000472822 CPSF1Q10570 1443 aaKnown RBP12.55□□□□□ -0.4
KDM5B-207ENST00000472822 PLEKHG3A1L390 1219 aa12.54□□□□□ -0.4
KDM5B-207ENST00000472822 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
KDM5B-207ENST00000472822 KNSTRNQ9Y448 316 aa12.54□□□□□ -0.4
KDM5B-207ENST00000472822 LRRC7Q96NW7 1537 aa12.54□□□□□ -0.4
KDM5B-207ENST00000472822 PARD3Q8TEW0 1356 aa12.54□□□□□ -0.4
KDM5B-207ENST00000472822 CC2D1BQ5T0F9 858 aaKnown RBP12.53□□□□□ -0.4
KDM5B-207ENST00000472822 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
KDM5B-207ENST00000472822 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.4
KDM5B-207ENST00000472822 NPC1L1Q9UHC9 1359 aa12.52□□□□□ -0.41
KDM5B-207ENST00000472822 AKAP12Q02952 1782 aa12.52□□□□□ -0.41
KDM5B-207ENST00000472822 NCOA3Q9Y6Q9 1424 aa12.52□□□□□ -0.41
KDM5B-207ENST00000472822 C19orf44Q9H6X5 657 aa12.51□□□□□ -0.41
KDM5B-207ENST00000472822 TERF2IPQ9NYB0 399 aa12.51□□□□□ -0.41
KDM5B-207ENST00000472822 CCER2I3L3R5 266 aa12.51□□□□□ -0.41
KDM5B-207ENST00000472822 MON2Q7Z3U7 1717 aa12.5□□□□□ -0.41
KDM5B-207ENST00000472822 ACEP12821 1306 aa12.5□□□□□ -0.41
KDM5B-207ENST00000472822 KTN1Q86UP2 1357 aaKnown RBP12.5□□□□□ -0.41
KDM5B-207ENST00000472822 C14orf37Q86TY3 774 aa12.5□□□□□ -0.41
KDM5B-207ENST00000472822 PMFBP1Q8TBY8 1022 aa12.5□□□□□ -0.41
KDM5B-207ENST00000472822 POLR3AO14802 1390 aaPredicted RBP12.49□□□□□ -0.41
KDM5B-207ENST00000472822 ITSN1Q15811 1721 aa12.49□□□□□ -0.41
KDM5B-207ENST00000472822 RALBP1Q15311 655 aa12.49□□□□□ -0.41
KDM5B-207ENST00000472822 HDGFL2Q7Z4V5 671 aaPredicted RBP12.49□□□□□ -0.41
KDM5B-207ENST00000472822 SSH2Q76I76 1423 aa12.49□□□□□ -0.41
KDM5B-207ENST00000472822 LTBP4Q8N2S1 1624 aa12.48□□□□□ -0.41
KDM5B-207ENST00000472822 FYB1O15117 783 aa12.48□□□□□ -0.41
KDM5B-207ENST00000472822 ORAI2Q96SN7 254 aa12.48□□□□□ -0.41
KDM5B-207ENST00000472822 MST1RQ04912 1400 aa12.48□□□□□ -0.41
KDM5B-207ENST00000472822 NRKQ7Z2Y5 1582 aa12.47□□□□□ -0.41
KDM5B-207ENST00000472822 DCCP43146 1447 aa12.47□□□□□ -0.41
KDM5B-207ENST00000472822 C1orf167Q5SNV9 1468 aa12.47□□□□□ -0.41
KDM5B-207ENST00000472822 CGNL1Q0VF96 1302 aa12.47□□□□□ -0.41
KDM5B-207ENST00000472822 USP6P35125 1406 aa12.46□□□□□ -0.41
KDM5B-207ENST00000472822 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.41
KDM5B-207ENST00000472822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.46□□□□□ -0.41
KDM5B-207ENST00000472822 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
KDM5B-207ENST00000472822 GGNBP2Q9H3C7 697 aa12.46□□□□□ -0.41
KDM5B-207ENST00000472822 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
KDM5B-207ENST00000472822 PHF8Q9UPP1 1060 aa12.46□□□□□ -0.41
KDM5B-207ENST00000472822 MYBBP1AQ9BQG0 1328 aaKnown RBP12.46□□□□□ -0.42
KDM5B-207ENST00000472822 PPP2R1AP30153 589 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms