RNA–Protein interactions for RNA: ENST00000472107.5

COPS6-207, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 835 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-207ENST00000472107 GJD4Q96KN9 370 aaPredicted RBP27.58■■■□□ 2.01
COPS6-207ENST00000472107 COL22A1Q8NFW1 1626 aaPredicted RBP27.57■■■□□ 2
COPS6-207ENST00000472107 HFM1A2PYH4 1435 aa27.57■■■□□ 2
COPS6-207ENST00000472107 MYOM2P54296 1465 aa27.57■■■□□ 2
COPS6-207ENST00000472107 BCL9LQ86UU0 1499 aa27.56■■■□□ 2
COPS6-207ENST00000472107 KIF1BO60333 1816 aa27.53■■■□□ 2
COPS6-207ENST00000472107 XPCQ01831 940 aaPredicted RBP27.53■■■□□ 2
COPS6-207ENST00000472107 FOXO3O43524 673 aa27.52■■■□□ 2
COPS6-207ENST00000472107 PRAG1Q86YV5 1406 aa27.5■■□□□ 1.99
COPS6-207ENST00000472107 RPGRIP1LQ68CZ1 1315 aa27.5■■□□□ 1.99
COPS6-207ENST00000472107 LRPPRCP42704 1394 aaKnown RBP27.49■■□□□ 1.99
COPS6-207ENST00000472107 PXDNQ92626 1479 aa27.48■■□□□ 1.99
COPS6-207ENST00000472107 BLMP54132 1417 aaPredicted RBP27.48■■□□□ 1.99
COPS6-207ENST00000472107 SF3B2Q13435 895 aaKnown RBP27.47■■□□□ 1.99
COPS6-207ENST00000472107 UNC5CLQ8IV45 518 aa27.47■■□□□ 1.99
COPS6-207ENST00000472107 CDC42BPGQ6DT37 1551 aa27.44■■□□□ 1.98
COPS6-207ENST00000472107 NUTM2FA1L443 756 aa27.44■■□□□ 1.98
COPS6-207ENST00000472107 MARF1Q9Y4F3 1742 aaKnown RBP27.44■■□□□ 1.98
COPS6-207ENST00000472107 DEFB132Q7Z7B7 95 aa27.42■■□□□ 1.98
COPS6-207ENST00000472107 RALGAPBQ86X10 1494 aa27.42■■□□□ 1.98
COPS6-207ENST00000472107 PPARGC1BQ86YN6 1023 aaKnown RBP27.4■■□□□ 1.98
COPS6-207ENST00000472107 NAIPQ13075 1403 aa27.4■■□□□ 1.98
COPS6-207ENST00000472107 HAP1P54257 671 aaPredicted RBP27.39■■□□□ 1.98
COPS6-207ENST00000472107 STK26Q9P289 416 aa27.39■■□□□ 1.98
COPS6-207ENST00000472107 SLIT2O94813 1529 aa27.37■■□□□ 1.97
COPS6-207ENST00000472107 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.37■■□□□ 1.97
COPS6-207ENST00000472107 SPATA31A3Q5VYP0 1347 aa27.37■■□□□ 1.97
COPS6-207ENST00000472107 GLI3P10071 1580 aa27.36■■□□□ 1.97
COPS6-207ENST00000472107 WAPLQ7Z5K2 1190 aa27.36■■□□□ 1.97
COPS6-207ENST00000472107 SEPT12Q8IYM1 358 aa27.36■■□□□ 1.97
COPS6-207ENST00000472107 SLC4A1APQ9BWU0 796 aaKnown RBP27.34■■□□□ 1.97
COPS6-207ENST00000472107 CCDC9Q9Y3X0 531 aaKnown RBP27.34■■□□□ 1.97
COPS6-207ENST00000472107 CCDC144AA2RUR9 1427 aa27.33■■□□□ 1.96
COPS6-207ENST00000472107 KRT28Q7Z3Y7 464 aa27.32■■□□□ 1.96
COPS6-207ENST00000472107 PPLO60437 1756 aa27.32■■□□□ 1.96
COPS6-207ENST00000472107 VPS72Q15906 364 aa27.3■■□□□ 1.96
COPS6-207ENST00000472107 PLEKHG5O94827 1062 aa27.29■■□□□ 1.96
COPS6-207ENST00000472107 KRT27Q7Z3Y8 459 aa27.29■■□□□ 1.96
COPS6-207ENST00000472107 ADGRF5Q8IZF2 1346 aa27.29■■□□□ 1.96
COPS6-207ENST00000472107 USP32Q8NFA0 1604 aa27.28■■□□□ 1.96
COPS6-207ENST00000472107 TECPR2O15040 1411 aa27.28■■□□□ 1.96
COPS6-207ENST00000472107 A0A0G2JS52 829 aa27.27■■□□□ 1.96
COPS6-207ENST00000472107 MYT1Q01538 1121 aa27.27■■□□□ 1.96
COPS6-207ENST00000472107 PSME1Q06323 249 aa27.27■■□□□ 1.96
COPS6-207ENST00000472107 BRWD3Q6RI45 1802 aa27.27■■□□□ 1.96
COPS6-207ENST00000472107 RRBP1Q9P2E9 1410 aaKnown RBP27.25■■□□□ 1.95
COPS6-207ENST00000472107 ABCC11Q96J66 1382 aa27.25■■□□□ 1.95
COPS6-207ENST00000472107 PLEKHH1Q9ULM0 1364 aa27.25■■□□□ 1.95
COPS6-207ENST00000472107 BAG6P46379 1132 aa27.25■■□□□ 1.95
COPS6-207ENST00000472107 RGL3Q3MIN7 710 aa27.25■■□□□ 1.95
COPS6-207ENST00000472107 TMEM132EQ6IEE7 984 aa27.25■■□□□ 1.95
COPS6-207ENST00000472107 CABLES1Q8TDN4 633 aa27.25■■□□□ 1.95
COPS6-207ENST00000472107 KIF1AQ12756 1690 aa27.24■■□□□ 1.95
COPS6-207ENST00000472107 LRP5O75197 1615 aa27.24■■□□□ 1.95
COPS6-207ENST00000472107 PSDA5PKW4 1024 aaPredicted RBP27.24■■□□□ 1.95
COPS6-207ENST00000472107 ONECUT3O60422 494 aaPredicted RBP27.24■■□□□ 1.95
COPS6-207ENST00000472107 LMOD2Q6P5Q4 547 aa27.24■■□□□ 1.95
COPS6-207ENST00000472107 TNS3Q68CZ2 1445 aa27.23■■□□□ 1.95
COPS6-207ENST00000472107 PHF8Q9UPP1 1060 aa27.22■■□□□ 1.95
COPS6-207ENST00000472107 FMN2Q9NZ56 1722 aa27.2■■□□□ 1.94
COPS6-207ENST00000472107 ANKRD30BQ9BXX2 1392 aa27.2■■□□□ 1.94
COPS6-207ENST00000472107 HRCP23327 699 aa27.19■■□□□ 1.94
COPS6-207ENST00000472107 ARHGEF10O15013 1369 aa27.16■■□□□ 1.94
COPS6-207ENST00000472107 YTHDC2Q9H6S0 1430 aaKnown RBP27.16■■□□□ 1.94
COPS6-207ENST00000472107 SBNO1A3KN83 1393 aa27.15■■□□□ 1.94
COPS6-207ENST00000472107 FAM83GA6ND36 823 aa27.15■■□□□ 1.94
COPS6-207ENST00000472107 NWD2Q9ULI1 1742 aa27.15■■□□□ 1.94
COPS6-207ENST00000472107 PLCH1Q4KWH8 1693 aa27.14■■□□□ 1.94
COPS6-207ENST00000472107 KNDC1Q76NI1 1749 aa27.14■■□□□ 1.94
COPS6-207ENST00000472107 FAM98CQ17RN3 349 aaKnown RBP27.14■■□□□ 1.94
COPS6-207ENST00000472107 SIRT1Q96EB6 747 aa27.13■■□□□ 1.93
COPS6-207ENST00000472107 PIK3C2GO75747 1445 aa27.11■■□□□ 1.93
COPS6-207ENST00000472107 SPATA31E1Q6ZUB1 1445 aa27.1■■□□□ 1.93
COPS6-207ENST00000472107 EN1Q05925 392 aaPredicted RBP27.1■■□□□ 1.93
COPS6-207ENST00000472107 NRXN1Q9ULB1 1477 aa27.09■■□□□ 1.93
COPS6-207ENST00000472107 BTG4Q9NY30 223 aa27.09■■□□□ 1.93
COPS6-207ENST00000472107 SAFB2Q14151 953 aaKnown RBP eCLIP27.07■■□□□ 1.92
COPS6-207ENST00000472107 R3HDM1Q15032 1099 aaKnown RBP27.07■■□□□ 1.92
COPS6-207ENST00000472107 PMFBP1Q8TBY8 1022 aa27.07■■□□□ 1.92
COPS6-207ENST00000472107 IFT172Q9UG01 1749 aa27.06■■□□□ 1.92
COPS6-207ENST00000472107 RGPD8O14715 1765 aaPredicted RBP27.06■■□□□ 1.92
COPS6-207ENST00000472107 DHX57Q6P158 1386 aaKnown RBP27.05■■□□□ 1.92
COPS6-207ENST00000472107 FAM182BQ5T319 152 aa27.04■■□□□ 1.92
COPS6-207ENST00000472107 PRAM1Q96QH2 718 aa27.04■■□□□ 1.92
COPS6-207ENST00000472107 C14orf93Q9H972 538 aaKnown RBP27.04■■□□□ 1.92
COPS6-207ENST00000472107 ABCA3Q99758 1704 aa27.04■■□□□ 1.92
COPS6-207ENST00000472107 POGKQ9P215 609 aa27.02■■□□□ 1.92
COPS6-207ENST00000472107 GPRASP1Q5JY77 1395 aa26.99■■□□□ 1.91
COPS6-207ENST00000472107 CFAP70Q5T0N1 1121 aa26.99■■□□□ 1.91
COPS6-207ENST00000472107 MPHOSPH9Q99550 1183 aa26.99■■□□□ 1.91
COPS6-207ENST00000472107 RGPD1P0DJD0 1748 aa26.99■■□□□ 1.91
COPS6-207ENST00000472107 ANKARQ7Z5J8 1434 aa26.99■■□□□ 1.91
COPS6-207ENST00000472107 SPATA31A5Q5VU36 1347 aa26.98■■□□□ 1.91
COPS6-207ENST00000472107 SPATA31A7Q8IWB4 1347 aa26.98■■□□□ 1.91
COPS6-207ENST00000472107 NRAPQ86VF7 1730 aa26.97■■□□□ 1.91
COPS6-207ENST00000472107 EZH2Q15910 746 aaKnown RBP26.96■■□□□ 1.91
COPS6-207ENST00000472107 COL14A1Q05707 1796 aaKnown RBP26.95■■□□□ 1.9
COPS6-207ENST00000472107 DISP2A7MBM2 1401 aa26.95■■□□□ 1.9
COPS6-207ENST00000472107 PRDM11Q9NQV5 511 aa26.93■■□□□ 1.9
COPS6-207ENST00000472107 PAK3O75914 559 aaPredicted RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms