RNA–Protein interactions for RNA: ENST00000470305.1

SECISBP2-205, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best)

Gene SECISBP2, Length 5,405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-205ENST00000470305 NUDCQ9Y266 331 aa10.52□□□□□ -0.73
SECISBP2-205ENST00000470305 NUP153P49790 1475 aaKnown RBP10.52□□□□□ -0.73
SECISBP2-205ENST00000470305 CFAP74Q9C0B2 1584 aa10.52□□□□□ -0.73
SECISBP2-205ENST00000470305 NEO1Q92859 1461 aa10.52□□□□□ -0.73
SECISBP2-205ENST00000470305 PDCL2Q8N4E4 241 aa10.51□□□□□ -0.73
SECISBP2-205ENST00000470305 TPD52L1Q16890 204 aaPredicted RBP10.51□□□□□ -0.73
SECISBP2-205ENST00000470305 RIMBP3CA6NJZ7 1639 aa10.51□□□□□ -0.73
SECISBP2-205ENST00000470305 RIMBP3BA6NNM3 1639 aa10.51□□□□□ -0.73
SECISBP2-205ENST00000470305 RIMBP3Q9UFD9 1639 aa10.51□□□□□ -0.73
SECISBP2-205ENST00000470305 GTF2A1P52655 376 aaPredicted RBP10.51□□□□□ -0.73
SECISBP2-205ENST00000470305 AXDND1Q5T1B0 1012 aaPredicted RBP10.51□□□□□ -0.73
SECISBP2-205ENST00000470305 BCL11BQ9C0K0 894 aaPredicted RBP10.51□□□□□ -0.73
SECISBP2-205ENST00000470305 C9orf84Q5VXU9 1444 aa10.5□□□□□ -0.73
SECISBP2-205ENST00000470305 ZNF518AQ6AHZ1 1483 aa10.5□□□□□ -0.73
SECISBP2-205ENST00000470305 SF3A1Q15459 793 aaKnown RBP10.5□□□□□ -0.73
SECISBP2-205ENST00000470305 PES1O00541 588 aaKnown RBP10.5□□□□□ -0.73
SECISBP2-205ENST00000470305 ESPNB1AK53 854 aa10.5□□□□□ -0.73
SECISBP2-205ENST00000470305 NOL8Q76FK4 1167 aaKnown RBP10.49□□□□□ -0.73
SECISBP2-205ENST00000470305 PLCD3Q8N3E9 789 aa10.49□□□□□ -0.73
SECISBP2-205ENST00000470305 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.49□□□□□ -0.73
SECISBP2-205ENST00000470305 KDM5BQ9UGL1 1544 aa10.49□□□□□ -0.73
SECISBP2-205ENST00000470305 SKIDA1Q1XH10 827 aa10.49□□□□□ -0.73
SECISBP2-205ENST00000470305 CENPHQ9H3R5 247 aa10.49□□□□□ -0.73
SECISBP2-205ENST00000470305 VGFO15240 615 aaPredicted RBP10.48□□□□□ -0.73
SECISBP2-205ENST00000470305 IPO8O15397 1037 aaKnown RBP10.48□□□□□ -0.73
SECISBP2-205ENST00000470305 CT47B1P0C2W7 299 aaPredicted RBP10.48□□□□□ -0.73
SECISBP2-205ENST00000470305 CBX1P83916 185 aa10.48□□□□□ -0.73
SECISBP2-205ENST00000470305 STAC3Q96MF2 364 aa10.48□□□□□ -0.73
SECISBP2-205ENST00000470305 HOMEZQ8IX15 550 aa10.48□□□□□ -0.73
SECISBP2-205ENST00000470305 ANKRD50Q9ULJ7 1429 aa10.48□□□□□ -0.73
SECISBP2-205ENST00000470305 ZNF644Q9H582 1327 aaPredicted RBP10.47□□□□□ -0.73
SECISBP2-205ENST00000470305 ABCC10Q5T3U5 1492 aa10.47□□□□□ -0.73
SECISBP2-205ENST00000470305 CENPQQ7L2Z9 268 aaPredicted RBP10.47□□□□□ -0.73
SECISBP2-205ENST00000470305 KIAA1107Q9UPP5 1409 aa10.47□□□□□ -0.73
SECISBP2-205ENST00000470305 EIF3JO75822 258 aaKnown RBP10.47□□□□□ -0.73
SECISBP2-205ENST00000470305 ISY1Q9ULR0 285 aaKnown RBP10.47□□□□□ -0.73
SECISBP2-205ENST00000470305 SAMD9Q5K651 1589 aa10.47□□□□□ -0.73
SECISBP2-205ENST00000470305 APBB1O00213 710 aa10.46□□□□□ -0.73
SECISBP2-205ENST00000470305 TICAM2Q86XR7 235 aa10.46□□□□□ -0.73
SECISBP2-205ENST00000470305 CCDC112Q8NEF3 446 aa10.46□□□□□ -0.73
SECISBP2-205ENST00000470305 MPHOSPH9Q99550 1183 aa10.46□□□□□ -0.73
SECISBP2-205ENST00000470305 CLGNO14967 610 aa10.46□□□□□ -0.73
SECISBP2-205ENST00000470305 TIGD1Q96MW7 591 aa10.46□□□□□ -0.73
SECISBP2-205ENST00000470305 TRAK2O60296 914 aa10.46□□□□□ -0.74
SECISBP2-205ENST00000470305 ITSN2Q9NZM3 1697 aa10.46□□□□□ -0.74
SECISBP2-205ENST00000470305 TRERF1Q96PN7 1200 aa10.46□□□□□ -0.74
SECISBP2-205ENST00000470305 SLC52A1Q9NWF4 448 aa10.46□□□□□ -0.74
SECISBP2-205ENST00000470305 RASSF8Q8NHQ8 419 aa10.45□□□□□ -0.74
SECISBP2-205ENST00000470305 PAIP2Q9BPZ3 127 aaKnown RBP10.45□□□□□ -0.74
SECISBP2-205ENST00000470305 CCDC9Q9Y3X0 531 aaKnown RBP10.45□□□□□ -0.74
SECISBP2-205ENST00000470305 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.45□□□□□ -0.74
SECISBP2-205ENST00000470305 ANKLE2Q86XL3 938 aa10.45□□□□□ -0.74
SECISBP2-205ENST00000470305 ABCA8O94911 1581 aa10.45□□□□□ -0.74
SECISBP2-205ENST00000470305 TDO2P48775 406 aa10.45□□□□□ -0.74
SECISBP2-205ENST00000470305 CAVIN1Q6NZI2 390 aaKnown RBP10.45□□□□□ -0.74
SECISBP2-205ENST00000470305 FOXD4L6Q3SYB3 417 aaPredicted RBP10.45□□□□□ -0.74
SECISBP2-205ENST00000470305 FOXD4L3Q6VB84 417 aaPredicted RBP10.45□□□□□ -0.74
SECISBP2-205ENST00000470305 ITPRIPQ8IWB1 547 aa10.44□□□□□ -0.74
SECISBP2-205ENST00000470305 CNTLNQ9NXG0 1405 aa10.44□□□□□ -0.74
SECISBP2-205ENST00000470305 NPHP1O15259 732 aa10.44□□□□□ -0.74
SECISBP2-205ENST00000470305 DDX11Q96FC9 970 aa10.44□□□□□ -0.74
SECISBP2-205ENST00000470305 CAMSAP2Q08AD1 1489 aa10.44□□□□□ -0.74
SECISBP2-205ENST00000470305 CT47A1Q5JQC4 288 aaPredicted RBP10.44□□□□□ -0.74
SECISBP2-205ENST00000470305 NUCB2P80303 420 aa10.44□□□□□ -0.74
SECISBP2-205ENST00000470305 GORABQ5T7V8 394 aa10.44□□□□□ -0.74
SECISBP2-205ENST00000470305 WWC1Q8IX03 1113 aa10.44□□□□□ -0.74
SECISBP2-205ENST00000470305 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
SECISBP2-205ENST00000470305 CCP110O43303 1012 aa10.43□□□□□ -0.74
SECISBP2-205ENST00000470305 CARD11Q9BXL7 1154 aa10.43□□□□□ -0.74
SECISBP2-205ENST00000470305 GOLGA6L10A6NI86 522 aa10.43□□□□□ -0.74
SECISBP2-205ENST00000470305 SASS6Q6UVJ0 657 aa10.43□□□□□ -0.74
SECISBP2-205ENST00000470305 FAM107BQ9H098 131 aa10.43□□□□□ -0.74
SECISBP2-205ENST00000470305 DHX37Q8IY37 1157 aaKnown RBP10.43□□□□□ -0.74
SECISBP2-205ENST00000470305 CAGE1Q8TC20 777 aa10.43□□□□□ -0.74
SECISBP2-205ENST00000470305 FBXO3Q9UK99 471 aa10.43□□□□□ -0.74
SECISBP2-205ENST00000470305 ERLIN1O75477 346 aa10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 ANKRD20A12PQ8NF67 263 aa10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 H3BQV1 296 aa10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 IFFO2Q5TF58 517 aa10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 MCTP1Q6DN14 999 aa10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 RNF214Q8ND24 703 aa10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 FRAT2O75474 233 aaPredicted RBP10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 DHX29Q7Z478 1369 aaKnown RBP10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 RALBP1Q15311 655 aa10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 RNF20Q5VTR2 975 aa10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 DAPK1P53355 1430 aa10.42□□□□□ -0.74
SECISBP2-205ENST00000470305 LETM1O95202 739 aaPredicted RBP10.41□□□□□ -0.74
SECISBP2-205ENST00000470305 LMOD3Q0VAK6 560 aa10.41□□□□□ -0.74
SECISBP2-205ENST00000470305 CLASRPQ8N2M8 674 aaKnown RBP10.41□□□□□ -0.74
SECISBP2-205ENST00000470305 ROCK1Q13464 1354 aa10.41□□□□□ -0.74
SECISBP2-205ENST00000470305 TMCO5BA8MYB1 307 aa10.41□□□□□ -0.74
SECISBP2-205ENST00000470305 DCAF11Q8TEB1 546 aa10.41□□□□□ -0.74
SECISBP2-205ENST00000470305 GPATCH8Q9UKJ3 1502 aaKnown RBP10.41□□□□□ -0.74
SECISBP2-205ENST00000470305 GRPEL1Q9HAV7 217 aa10.41□□□□□ -0.74
SECISBP2-205ENST00000470305 IBSPP21815 317 aaPredicted RBP10.4□□□□□ -0.74
SECISBP2-205ENST00000470305 EIF3AQ14152 1382 aaKnown RBP10.4□□□□□ -0.74
SECISBP2-205ENST00000470305 GOLGA2Q08379 1002 aa10.4□□□□□ -0.74
SECISBP2-205ENST00000470305 ATP10AO60312 1499 aa10.4□□□□□ -0.74
SECISBP2-205ENST00000470305 TRIM6-TRIM34B2RNG4 842 aa10.4□□□□□ -0.74
SECISBP2-205ENST00000470305 ZSCAN30Q86W11 494 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms