RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 IFT172Q9UG01 1749 aa21.92■■□□□ 1.1
SDCCAG3-209ENST00000468963 TECPR2O15040 1411 aa21.92■■□□□ 1.1
SDCCAG3-209ENST00000468963 PIK3C2GO75747 1445 aa21.92■■□□□ 1.1
SDCCAG3-209ENST00000468963 C14orf93Q9H972 538 aaKnown RBP21.92■■□□□ 1.1
SDCCAG3-209ENST00000468963 LAMC1P11047 1609 aa21.91■■□□□ 1.1
SDCCAG3-209ENST00000468963 SIRT1Q96EB6 747 aa21.9■■□□□ 1.1
SDCCAG3-209ENST00000468963 AFF2P51816 1311 aa21.88■■□□□ 1.09
SDCCAG3-209ENST00000468963 PLEKHH1Q9ULM0 1364 aa21.87■■□□□ 1.09
SDCCAG3-209ENST00000468963 RXRBP28702 533 aa21.87■■□□□ 1.09
SDCCAG3-209ENST00000468963 ESCO1Q5FWF5 840 aa21.87■■□□□ 1.09
SDCCAG3-209ENST00000468963 CFAP70Q5T0N1 1121 aa21.87■■□□□ 1.09
SDCCAG3-209ENST00000468963 HRCP23327 699 aa21.86■■□□□ 1.09
SDCCAG3-209ENST00000468963 YTHDC2Q9H6S0 1430 aaKnown RBP21.86■■□□□ 1.09
SDCCAG3-209ENST00000468963 NRXN1Q9ULB1 1477 aa21.85■■□□□ 1.09
SDCCAG3-209ENST00000468963 C8orf37Q96NL8 207 aa21.85■■□□□ 1.09
SDCCAG3-209ENST00000468963 CDC42BPGQ6DT37 1551 aa21.84■■□□□ 1.09
SDCCAG3-209ENST00000468963 NPHP3Q7Z494 1330 aa21.82■■□□□ 1.08
SDCCAG3-209ENST00000468963 NUTM2FA1L443 756 aa21.82■■□□□ 1.08
SDCCAG3-209ENST00000468963 FOXO3O43524 673 aa21.82■■□□□ 1.08
SDCCAG3-209ENST00000468963 ADAMTS2O95450 1211 aa21.82■■□□□ 1.08
SDCCAG3-209ENST00000468963 QTRT2Q9H974 415 aaKnown RBP21.82■■□□□ 1.08
SDCCAG3-209ENST00000468963 DHX57Q6P158 1386 aaKnown RBP21.81■■□□□ 1.08
SDCCAG3-209ENST00000468963 MYOM2P54296 1465 aa21.81■■□□□ 1.08
SDCCAG3-209ENST00000468963 KNDC1Q76NI1 1749 aa21.8■■□□□ 1.08
SDCCAG3-209ENST00000468963 NGLY1Q96IV0 654 aa21.8■■□□□ 1.08
SDCCAG3-209ENST00000468963 PXDNQ92626 1479 aa21.77■■□□□ 1.08
SDCCAG3-209ENST00000468963 RBM6P78332 1123 aaKnown RBP21.77■■□□□ 1.08
SDCCAG3-209ENST00000468963 XPCQ01831 940 aaPredicted RBP21.77■■□□□ 1.08
SDCCAG3-209ENST00000468963 UPF1Q92900 1129 aaKnown RBP eCLIP21.77■■□□□ 1.08
SDCCAG3-209ENST00000468963 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.07
SDCCAG3-209ENST00000468963 FNBP4Q8N3X1 1017 aaPredicted RBP21.76■■□□□ 1.07
SDCCAG3-209ENST00000468963 PRAM1Q96QH2 718 aa21.75■■□□□ 1.07
SDCCAG3-209ENST00000468963 COL22A1Q8NFW1 1626 aaPredicted RBP21.73■■□□□ 1.07
SDCCAG3-209ENST00000468963 DCAF11Q8TEB1 546 aa21.73■■□□□ 1.07
SDCCAG3-209ENST00000468963 STAC3Q96MF2 364 aa21.73■■□□□ 1.07
SDCCAG3-209ENST00000468963 USP21Q9UK80 565 aa21.73■■□□□ 1.07
SDCCAG3-209ENST00000468963 KDM2AQ9Y2K7 1162 aa21.73■■□□□ 1.07
SDCCAG3-209ENST00000468963 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
SDCCAG3-209ENST00000468963 KRT28Q7Z3Y7 464 aa21.72■■□□□ 1.07
SDCCAG3-209ENST00000468963 SAFB2Q14151 953 aaKnown RBP eCLIP21.71■■□□□ 1.07
SDCCAG3-209ENST00000468963 SPATA31A3Q5VYP0 1347 aa21.71■■□□□ 1.07
SDCCAG3-209ENST00000468963 POGKQ9P215 609 aa21.7■■□□□ 1.06
SDCCAG3-209ENST00000468963 PHF8Q9UPP1 1060 aa21.7■■□□□ 1.06
SDCCAG3-209ENST00000468963 TRPC5Q9UL62 973 aaPredicted RBP21.69■■□□□ 1.06
SDCCAG3-209ENST00000468963 TRAK1Q9UPV9 953 aa21.69■■□□□ 1.06
SDCCAG3-209ENST00000468963 DLC1Q96QB1 1528 aa21.69■■□□□ 1.06
SDCCAG3-209ENST00000468963 ADGRB1O14514 1584 aa21.69■■□□□ 1.06
SDCCAG3-209ENST00000468963 RGS12O14924 1447 aa21.67■■□□□ 1.06
SDCCAG3-209ENST00000468963 RGPD8O14715 1765 aaPredicted RBP21.66■■□□□ 1.06
SDCCAG3-209ENST00000468963 PSME1Q06323 249 aa21.65■■□□□ 1.06
SDCCAG3-209ENST00000468963 BCL9LQ86UU0 1499 aa21.64■■□□□ 1.06
SDCCAG3-209ENST00000468963 ATRNO75882 1429 aa21.64■■□□□ 1.06
SDCCAG3-209ENST00000468963 KIF1AQ12756 1690 aa21.64■■□□□ 1.05
SDCCAG3-209ENST00000468963 HIRIP3Q9BW71 556 aaPredicted RBP21.62■■□□□ 1.05
SDCCAG3-209ENST00000468963 PMFBP1Q8TBY8 1022 aa21.61■■□□□ 1.05
SDCCAG3-209ENST00000468963 ANKARQ7Z5J8 1434 aa21.61■■□□□ 1.05
SDCCAG3-209ENST00000468963 SBNO1A3KN83 1393 aa21.61■■□□□ 1.05
SDCCAG3-209ENST00000468963 MINK1Q8N4C8 1332 aaPredicted RBP21.6■■□□□ 1.05
SDCCAG3-209ENST00000468963 WASLO00401 505 aaPredicted RBP21.59■■□□□ 1.05
SDCCAG3-209ENST00000468963 PRR36Q9H6K5 1346 aa21.58■■□□□ 1.05
SDCCAG3-209ENST00000468963 MARF1Q9Y4F3 1742 aaKnown RBP21.58■■□□□ 1.05
SDCCAG3-209ENST00000468963 CABLES1Q8TDN4 633 aa21.58■■□□□ 1.05
SDCCAG3-209ENST00000468963 GJD4Q96KN9 370 aaPredicted RBP21.58■■□□□ 1.05
SDCCAG3-209ENST00000468963 USP32Q8NFA0 1604 aa21.58■■□□□ 1.04
SDCCAG3-209ENST00000468963 ADGRB2O60241 1585 aa21.57■■□□□ 1.04
SDCCAG3-209ENST00000468963 TNS3Q68CZ2 1445 aa21.57■■□□□ 1.04
SDCCAG3-209ENST00000468963 UNC5CLQ8IV45 518 aa21.57■■□□□ 1.04
SDCCAG3-209ENST00000468963 SLIT2O94813 1529 aa21.55■■□□□ 1.04
SDCCAG3-209ENST00000468963 LMOD2Q6P5Q4 547 aa21.54■■□□□ 1.04
SDCCAG3-209ENST00000468963 ARHGEF10O15013 1369 aa21.53■■□□□ 1.04
SDCCAG3-209ENST00000468963 EIF3AQ14152 1382 aaKnown RBP21.52■■□□□ 1.04
SDCCAG3-209ENST00000468963 ATAD2Q6PL18 1390 aa21.51■■□□□ 1.03
SDCCAG3-209ENST00000468963 HAP1P54257 671 aaPredicted RBP21.51■■□□□ 1.03
SDCCAG3-209ENST00000468963 TULP4Q9NRJ4 1543 aa21.5■■□□□ 1.03
SDCCAG3-209ENST00000468963 FAM83GA6ND36 823 aa21.5■■□□□ 1.03
SDCCAG3-209ENST00000468963 PLEKHG5O94827 1062 aa21.5■■□□□ 1.03
SDCCAG3-209ENST00000468963 NBPF1Q3BBV0 1214 aa21.5■■□□□ 1.03
SDCCAG3-209ENST00000468963 EP400Q96L91 3159 aa21.49■■□□□ 1.03
SDCCAG3-209ENST00000468963 NUDT16Q96DE0 195 aaKnown RBP21.49■■□□□ 1.03
SDCCAG3-209ENST00000468963 GPRASP1Q5JY77 1395 aa21.48■■□□□ 1.03
SDCCAG3-209ENST00000468963 NGDNQ8NEJ9 315 aaKnown RBP21.48■■□□□ 1.03
SDCCAG3-209ENST00000468963 CDK19Q9BWU1 502 aa21.48■■□□□ 1.03
SDCCAG3-209ENST00000468963 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.48■■□□□ 1.03
SDCCAG3-209ENST00000468963 RALGAPBQ86X10 1494 aa21.47■■□□□ 1.03
SDCCAG3-209ENST00000468963 VPS72Q15906 364 aa21.47■■□□□ 1.03
SDCCAG3-209ENST00000468963 ARHGEF28Q8N1W1 1705 aaKnown RBP21.46■■□□□ 1.03
SDCCAG3-209ENST00000468963 TRPM3Q9HCF6 1732 aaPredicted RBP21.46■■□□□ 1.03
SDCCAG3-209ENST00000468963 ONECUT3O60422 494 aaPredicted RBP21.45■■□□□ 1.02
SDCCAG3-209ENST00000468963 GLI3P10071 1580 aa21.44■■□□□ 1.02
SDCCAG3-209ENST00000468963 KIAA1210Q9ULL0 1709 aa21.43■■□□□ 1.02
SDCCAG3-209ENST00000468963 ATP7BP35670 1465 aa21.42■■□□□ 1.02
SDCCAG3-209ENST00000468963 CCDC125Q86Z20 511 aa21.42■■□□□ 1.02
SDCCAG3-209ENST00000468963 ALS2Q96Q42 1657 aa21.42■■□□□ 1.02
SDCCAG3-209ENST00000468963 CCDC61Q9Y6R9 512 aa21.42■■□□□ 1.02
SDCCAG3-209ENST00000468963 PLEKHG3A1L390 1219 aa21.41■■□□□ 1.02
SDCCAG3-209ENST00000468963 PAK3O75914 559 aaPredicted RBP21.41■■□□□ 1.02
SDCCAG3-209ENST00000468963 SEPT12Q8IYM1 358 aa21.41■■□□□ 1.02
SDCCAG3-209ENST00000468963 L3MBTL2Q969R5 705 aa21.41■■□□□ 1.02
SDCCAG3-209ENST00000468963 ABCA3Q99758 1704 aa21.41■■□□□ 1.02
SDCCAG3-209ENST00000468963 NBPF8Q3BBV2 869 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms