RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 C3P01024 1663 aa8.08□□□□□ -1.12
SHQ1-205ENST00000468371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.08□□□□□ -1.123e-6■■□□□ 12.2
SHQ1-205ENST00000468371 C14orf93Q9H972 538 aaKnown RBP8.08□□□□□ -1.12
SHQ1-205ENST00000468371 NEFMP07197 916 aa8.07□□□□□ -1.12
SHQ1-205ENST00000468371 TMF1P82094 1093 aa8.07□□□□□ -1.12
SHQ1-205ENST00000468371 CDK19Q9BWU1 502 aa8.07□□□□□ -1.12
SHQ1-205ENST00000468371 ZC3H6P61129 1189 aaKnown RBP8.07□□□□□ -1.12
SHQ1-205ENST00000468371 RTL5Q5HYW3 569 aaPredicted RBP8.07□□□□□ -1.12
SHQ1-205ENST00000468371 TSHZ2Q9NRE2 1034 aa8.07□□□□□ -1.12
SHQ1-205ENST00000468371 CCDC61Q9Y6R9 512 aa8.07□□□□□ -1.12
SHQ1-205ENST00000468371 HNRNPUQ00839 825 aaKnown RBP eCLIP8.07□□□□□ -1.12
SHQ1-205ENST00000468371 BRINP3Q76B58 766 aa8.07□□□□□ -1.12
SHQ1-205ENST00000468371 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
SHQ1-205ENST00000468371 TRPC5Q9UL62 973 aaPredicted RBP8.06□□□□□ -1.12
SHQ1-205ENST00000468371 CABP2Q9NPB3 220 aa8.06□□□□□ -1.12
SHQ1-205ENST00000468371 SPATA31A6Q5VVP1 1343 aa8.06□□□□□ -1.12
SHQ1-205ENST00000468371 PRDM15P57071 1507 aaPredicted RBP8.05□□□□□ -1.12
SHQ1-205ENST00000468371 EIF2AK4Q9P2K8 1649 aaKnown RBP8.05□□□□□ -1.12
SHQ1-205ENST00000468371 WASLO00401 505 aaPredicted RBP8.05□□□□□ -1.12
SHQ1-205ENST00000468371 AMPHP49418 695 aa8.05□□□□□ -1.12
SHQ1-205ENST00000468371 NPM2Q86SE8 214 aaKnown RBP8.05□□□□□ -1.12
SHQ1-205ENST00000468371 LTV1Q96GA3 475 aaPredicted RBP8.05□□□□□ -1.12
SHQ1-205ENST00000468371 NBR1Q14596 966 aa8.04□□□□□ -1.12
SHQ1-205ENST00000468371 EIF4G2P78344 907 aaKnown RBP eCLIP8.04□□□□□ -1.12
SHQ1-205ENST00000468371 CABLES1Q8TDN4 633 aa8.04□□□□□ -1.12
SHQ1-205ENST00000468371 METP08581 1390 aa8.04□□□□□ -1.12
SHQ1-205ENST00000468371 AFF2P51816 1311 aa8.04□□□□□ -1.12
SHQ1-205ENST00000468371 TOM1L2Q6ZVM7 507 aa8.04□□□□□ -1.12
SHQ1-205ENST00000468371 NLRP2Q9NX02 1062 aa8.03□□□□□ -1.12
SHQ1-205ENST00000468371 RBM6P78332 1123 aaKnown RBP8.03□□□□□ -1.12
SHQ1-205ENST00000468371 ZNF692Q9BU19 519 aaPredicted RBP8.03□□□□□ -1.12
SHQ1-205ENST00000468371 CABP1Q9NZU7 370 aa8.02□□□□□ -1.13
SHQ1-205ENST00000468371 MYO3AQ8NEV4 1616 aa8.02□□□□□ -1.13
SHQ1-205ENST00000468371 SPATA31D1Q6ZQQ2 1576 aa8.02□□□□□ -1.13
SHQ1-205ENST00000468371 NBPF1Q3BBV0 1214 aa8.02□□□□□ -1.13
SHQ1-205ENST00000468371 COG3Q96JB2 828 aa8.02□□□□□ -1.13
SHQ1-205ENST00000468371 CEP152O94986 1710 aa8.02□□□□□ -1.13
SHQ1-205ENST00000468371 MROH2AA6NES4 1674 aa8.01□□□□□ -1.13
SHQ1-205ENST00000468371 ZC3H13Q5T200 1668 aaKnown RBP8.01□□□□□ -1.13
SHQ1-205ENST00000468371 ADGRB3O60242 1522 aa8.01□□□□□ -1.13
SHQ1-205ENST00000468371 SOCS7O14512 581 aa8.01□□□□□ -1.13
SHQ1-205ENST00000468371 TRPM2O94759 1503 aa8.01□□□□□ -1.13
SHQ1-205ENST00000468371 TNNT2P45379 298 aaPredicted RBP8□□□□□ -1.13
SHQ1-205ENST00000468371 FAM9BQ8IZU0 186 aa8□□□□□ -1.13
SHQ1-205ENST00000468371 KNSTRNQ9Y448 316 aa8□□□□□ -1.13
SHQ1-205ENST00000468371 RBM19Q9Y4C8 960 aaKnown RBP8□□□□□ -1.13
SHQ1-205ENST00000468371 FAM135BQ49AJ0 1406 aa8□□□□□ -1.13
SHQ1-205ENST00000468371 LMTK2Q8IWU2 1503 aa8□□□□□ -1.13
SHQ1-205ENST00000468371 SENP3-EIF4A1A0A087X0R7 540 aa8□□□□□ -1.13
SHQ1-205ENST00000468371 MSH5O43196 834 aa8□□□□□ -1.13
SHQ1-205ENST00000468371 CHRNA2Q15822 529 aa8□□□□□ -1.13
SHQ1-205ENST00000468371 SYTL4Q96C24 671 aaPredicted RBP8□□□□□ -1.13
SHQ1-205ENST00000468371 BTG4Q9NY30 223 aa8□□□□□ -1.13
SHQ1-205ENST00000468371 YTHDC2Q9H6S0 1430 aaKnown RBP7.99□□□□□ -1.13
SHQ1-205ENST00000468371 ABCC11Q96J66 1382 aa7.99□□□□□ -1.13
SHQ1-205ENST00000468371 TET3O43151 1660 aa7.99□□□□□ -1.13
SHQ1-205ENST00000468371 KCNH5Q8NCM2 988 aa7.99□□□□□ -1.13
SHQ1-205ENST00000468371 DAXXQ9UER7 740 aaPredicted RBP7.99□□□□□ -1.13
SHQ1-205ENST00000468371 LRRC7Q96NW7 1537 aa7.99□□□□□ -1.13
SHQ1-205ENST00000468371 ARHGEF10O15013 1369 aa7.99□□□□□ -1.13
SHQ1-205ENST00000468371 BAG6P46379 1132 aa7.99□□□□□ -1.13
SHQ1-205ENST00000468371 NBPF8Q3BBV2 869 aa7.99□□□□□ -1.13
SHQ1-205ENST00000468371 NKTRP30414 1462 aaKnown RBP7.98□□□□□ -1.13
SHQ1-205ENST00000468371 RNF17Q9BXT8 1623 aaKnown RBP7.98□□□□□ -1.13
SHQ1-205ENST00000468371 SIRT1Q96EB6 747 aa7.98□□□□□ -1.13
SHQ1-205ENST00000468371 ZRANB1Q9UGI0 708 aa7.98□□□□□ -1.13
SHQ1-205ENST00000468371 PIK3C2BO00750 1634 aa7.98□□□□□ -1.13
SHQ1-205ENST00000468371 PPP1R1BQ9UD71 204 aaPredicted RBP7.98□□□□□ -1.13
SHQ1-205ENST00000468371 ROBO2Q9HCK4 1378 aa7.98□□□□□ -1.13
SHQ1-205ENST00000468371 ACEP12821 1306 aa7.98□□□□□ -1.13
SHQ1-205ENST00000468371 MED14O60244 1454 aa7.98□□□□□ -1.13
SHQ1-205ENST00000468371 IQSEC2Q5JU85 1478 aa7.98□□□□□ -1.13
SHQ1-205ENST00000468371 ST20-MTHFSA0A0A6YYL1 179 aa7.98□□□□□ -1.13
SHQ1-205ENST00000468371 TIMELESSQ9UNS1 1208 aa7.98□□□□□ -1.13
SHQ1-205ENST00000468371 NCOA3Q9Y6Q9 1424 aa7.98□□□□□ -1.13
SHQ1-205ENST00000468371 ADGRL3Q9HAR2 1447 aa7.97□□□□□ -1.13
SHQ1-205ENST00000468371 FAM98CQ17RN3 349 aaKnown RBP7.97□□□□□ -1.13
SHQ1-205ENST00000468371 KLHL34Q8N239 644 aa7.97□□□□□ -1.13
SHQ1-205ENST00000468371 NBPF14Q5TI25 921 aa7.96□□□□□ -1.13
SHQ1-205ENST00000468371 RAPGEF4Q8WZA2 1011 aa7.96□□□□□ -1.13
SHQ1-205ENST00000468371 SLIT1O75093 1534 aa7.96□□□□□ -1.13
SHQ1-205ENST00000468371 ARHGAP23Q9P227 1491 aa7.96□□□□□ -1.14
SHQ1-205ENST00000468371 UNC5CLQ8IV45 518 aa7.96□□□□□ -1.14
SHQ1-205ENST00000468371 ARXQ96QS3 562 aa7.96□□□□□ -1.14
SHQ1-205ENST00000468371 IQGAP1P46940 1657 aa7.95□□□□□ -1.14
SHQ1-205ENST00000468371 EXOC5O00471 708 aa7.95□□□□□ -1.14
SHQ1-205ENST00000468371 ATAD2Q6PL18 1390 aa7.95□□□□□ -1.14
SHQ1-205ENST00000468371 MORC1Q86VD1 984 aa7.94□□□□□ -1.14
SHQ1-205ENST00000468371 KTN1Q86UP2 1357 aaKnown RBP7.94□□□□□ -1.14
SHQ1-205ENST00000468371 ADAMTS13Q76LX8 1427 aa7.94□□□□□ -1.14
SHQ1-205ENST00000468371 BCL11BQ9C0K0 894 aaPredicted RBP7.94□□□□□ -1.14
SHQ1-205ENST00000468371 ANP32AP39687 249 aaKnown RBP7.94□□□□□ -1.14
SHQ1-205ENST00000468371 KRT27Q7Z3Y8 459 aa7.94□□□□□ -1.14
SHQ1-205ENST00000468371 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
SHQ1-205ENST00000468371 ZFYVE9O95405 1425 aa7.93□□□□□ -1.14
SHQ1-205ENST00000468371 NPHP1O15259 732 aa7.93□□□□□ -1.14
SHQ1-205ENST00000468371 SEPT12Q8IYM1 358 aa7.93□□□□□ -1.14
SHQ1-205ENST00000468371 GJD4Q96KN9 370 aaPredicted RBP7.93□□□□□ -1.14
SHQ1-205ENST00000468371 CFAP53Q96M91 514 aa7.93□□□□□ -1.14
SHQ1-205ENST00000468371 SLC12A5Q9H2X9 1139 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms