RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 SAFB2Q14151 953 aaKnown RBP eCLIP20.56■□□□□ 0.88
DNMT3A-208ENST00000466601 FBXO41Q8TF61 875 aa20.56■□□□□ 0.88
DNMT3A-208ENST00000466601 CARD11Q9BXL7 1154 aa20.56■□□□□ 0.88
DNMT3A-208ENST00000466601 CADPS2Q86UW7 1296 aa20.55■□□□□ 0.88
DNMT3A-208ENST00000466601 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.55■□□□□ 0.88
DNMT3A-208ENST00000466601 DCCP43146 1447 aa20.53■□□□□ 0.88
DNMT3A-208ENST00000466601 NALCNQ8IZF0 1738 aa20.53■□□□□ 0.88
DNMT3A-208ENST00000466601 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
DNMT3A-208ENST00000466601 PIP4K2BP78356 416 aa20.51■□□□□ 0.87
DNMT3A-208ENST00000466601 SLAIN2Q9P270 581 aa20.51■□□□□ 0.87
DNMT3A-208ENST00000466601 MINK1Q8N4C8 1332 aaPredicted RBP20.5■□□□□ 0.87
DNMT3A-208ENST00000466601 CENPJQ9HC77 1338 aaPredicted RBP20.5■□□□□ 0.87
DNMT3A-208ENST00000466601 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
DNMT3A-208ENST00000466601 EIF3AQ14152 1382 aaKnown RBP20.48■□□□□ 0.87
DNMT3A-208ENST00000466601 HIRIP3Q9BW71 556 aaPredicted RBP20.48■□□□□ 0.87
DNMT3A-208ENST00000466601 CDC42BPGQ6DT37 1551 aa20.46■□□□□ 0.87
DNMT3A-208ENST00000466601 MST1RQ04912 1400 aa20.45■□□□□ 0.86
DNMT3A-208ENST00000466601 ADGRB2O60241 1585 aa20.43■□□□□ 0.86
DNMT3A-208ENST00000466601 NUTM2FA1L443 756 aa20.43■□□□□ 0.86
DNMT3A-208ENST00000466601 WASLO00401 505 aaPredicted RBP20.43■□□□□ 0.86
DNMT3A-208ENST00000466601 C1orf167Q5SNV9 1468 aa20.43■□□□□ 0.86
DNMT3A-208ENST00000466601 QRICH2Q9H0J4 1663 aa20.41■□□□□ 0.86
DNMT3A-208ENST00000466601 USP47Q96K76 1375 aa20.4■□□□□ 0.86
DNMT3A-208ENST00000466601 FMN2Q9NZ56 1722 aa20.39■□□□□ 0.86
DNMT3A-208ENST00000466601 ST20-MTHFSA0A0A6YYL1 179 aa20.39■□□□□ 0.85
DNMT3A-208ENST00000466601 BRINP3Q76B58 766 aa20.39■□□□□ 0.85
DNMT3A-208ENST00000466601 CDK19Q9BWU1 502 aa20.39■□□□□ 0.85
DNMT3A-208ENST00000466601 ORAI2Q96SN7 254 aa20.38■□□□□ 0.85
DNMT3A-208ENST00000466601 ROBO1Q9Y6N7 1651 aa20.38■□□□□ 0.85
DNMT3A-208ENST00000466601 ESCO1Q5FWF5 840 aa20.37■□□□□ 0.85
DNMT3A-208ENST00000466601 SBNO2Q9Y2G9 1366 aa20.36■□□□□ 0.85
DNMT3A-208ENST00000466601 EVC2Q86UK5 1308 aa20.36■□□□□ 0.85
DNMT3A-208ENST00000466601 ANKARQ7Z5J8 1434 aa20.36■□□□□ 0.85
DNMT3A-208ENST00000466601 TULP4Q9NRJ4 1543 aa20.35■□□□□ 0.85
DNMT3A-208ENST00000466601 PRR36Q9H6K5 1346 aa20.34■□□□□ 0.85
DNMT3A-208ENST00000466601 SRPK2P78362 688 aaKnown RBP20.34■□□□□ 0.85
DNMT3A-208ENST00000466601 TESK2Q96S53 571 aa20.34■□□□□ 0.85
DNMT3A-208ENST00000466601 HSPA1LP34931 641 aa20.33■□□□□ 0.85
DNMT3A-208ENST00000466601 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.85
DNMT3A-208ENST00000466601 NUDT16Q96DE0 195 aaKnown RBP20.33■□□□□ 0.85
DNMT3A-208ENST00000466601 CABP2Q9NPB3 220 aa20.33■□□□□ 0.85
DNMT3A-208ENST00000466601 SLC24A1O60721 1099 aa20.32■□□□□ 0.84
DNMT3A-208ENST00000466601 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
DNMT3A-208ENST00000466601 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
DNMT3A-208ENST00000466601 HSPA5P11021 654 aaKnown RBP20.3■□□□□ 0.84
DNMT3A-208ENST00000466601 RGPD8O14715 1765 aaPredicted RBP20.3■□□□□ 0.84
DNMT3A-208ENST00000466601 DDX17Q92841 729 aaKnown RBP20.29■□□□□ 0.84
DNMT3A-208ENST00000466601 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
DNMT3A-208ENST00000466601 ATP7BP35670 1465 aa20.29■□□□□ 0.84
DNMT3A-208ENST00000466601 FOXO3O43524 673 aa20.28■□□□□ 0.84
DNMT3A-208ENST00000466601 PMFBP1Q8TBY8 1022 aa20.28■□□□□ 0.84
DNMT3A-208ENST00000466601 ZEB1P37275 1124 aaPredicted RBP20.27■□□□□ 0.84
DNMT3A-208ENST00000466601 AHDC1Q5TGY3 1603 aaPredicted RBP20.27■□□□□ 0.83
DNMT3A-208ENST00000466601 TMF1P82094 1093 aa20.26■□□□□ 0.83
DNMT3A-208ENST00000466601 NPHP3Q7Z494 1330 aa20.26■□□□□ 0.83
DNMT3A-208ENST00000466601 KIF1AQ12756 1690 aa20.26■□□□□ 0.83
DNMT3A-208ENST00000466601 PHLPP1O60346 1717 aa20.24■□□□□ 0.83
DNMT3A-208ENST00000466601 NHSL1Q5SYE7 1610 aa20.24■□□□□ 0.83
DNMT3A-208ENST00000466601 PUS7Q96PZ0 661 aaKnown RBP20.24■□□□□ 0.83
DNMT3A-208ENST00000466601 ATAD2Q6PL18 1390 aa20.23■□□□□ 0.83
DNMT3A-208ENST00000466601 PLEKHG3A1L390 1219 aa20.23■□□□□ 0.83
DNMT3A-208ENST00000466601 ITSN1Q15811 1721 aa20.23■□□□□ 0.83
DNMT3A-208ENST00000466601 NGDNQ8NEJ9 315 aaKnown RBP20.23■□□□□ 0.83
DNMT3A-208ENST00000466601 SOS2Q07890 1332 aaPredicted RBP20.23■□□□□ 0.83
DNMT3A-208ENST00000466601 DISP3Q9P2K9 1392 aa20.22■□□□□ 0.83
DNMT3A-208ENST00000466601 PPIP5K1Q6PFW1 1433 aa20.22■□□□□ 0.83
DNMT3A-208ENST00000466601 XPCQ01831 940 aaPredicted RBP20.22■□□□□ 0.83
DNMT3A-208ENST00000466601 CABP1Q9NZU7 370 aa20.22■□□□□ 0.83
DNMT3A-208ENST00000466601 PSME1Q06323 249 aa20.21■□□□□ 0.83
DNMT3A-208ENST00000466601 KRT28Q7Z3Y7 464 aa20.21■□□□□ 0.83
DNMT3A-208ENST00000466601 TOPAZ1Q8N9V7 1692 aa20.21■□□□□ 0.83
DNMT3A-208ENST00000466601 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
DNMT3A-208ENST00000466601 CDCA8Q53HL2 280 aa20.2■□□□□ 0.82
DNMT3A-208ENST00000466601 LRRC59Q96AG4 307 aaKnown RBP20.2■□□□□ 0.82
DNMT3A-208ENST00000466601 ACEP12821 1306 aa20.2■□□□□ 0.82
DNMT3A-208ENST00000466601 PXDNQ92626 1479 aa20.18■□□□□ 0.82
DNMT3A-208ENST00000466601 POLR3AO14802 1390 aaPredicted RBP20.18■□□□□ 0.82
DNMT3A-208ENST00000466601 TMC1Q8TDI8 760 aa20.17■□□□□ 0.82
DNMT3A-208ENST00000466601 JCADQ9P266 1359 aa20.16■□□□□ 0.82
DNMT3A-208ENST00000466601 SLC12A5Q9H2X9 1139 aa20.15■□□□□ 0.82
DNMT3A-208ENST00000466601 SBNO1A3KN83 1393 aa20.14■□□□□ 0.81
DNMT3A-208ENST00000466601 SPATA31A3Q5VYP0 1347 aa20.13■□□□□ 0.81
DNMT3A-208ENST00000466601 ZNF692Q9BU19 519 aaPredicted RBP20.13■□□□□ 0.81
DNMT3A-208ENST00000466601 NINLQ9Y2I6 1382 aa20.12■□□□□ 0.81
DNMT3A-208ENST00000466601 C11orf95C9JLR9 678 aaPredicted RBP20.11■□□□□ 0.81
DNMT3A-208ENST00000466601 PAK3O75914 559 aaPredicted RBP20.11■□□□□ 0.81
DNMT3A-208ENST00000466601 POLR3GLQ9BT43 218 aa20.11■□□□□ 0.81
DNMT3A-208ENST00000466601 PNPLA6Q8IY17 1366 aa20.1■□□□□ 0.81
DNMT3A-208ENST00000466601 HDGFL2Q7Z4V5 671 aaPredicted RBP20.1■□□□□ 0.81
DNMT3A-208ENST00000466601 CPSF1Q10570 1443 aaKnown RBP20.1■□□□□ 0.81
DNMT3A-208ENST00000466601 TNS3Q68CZ2 1445 aa20.1■□□□□ 0.81
DNMT3A-208ENST00000466601 LMOD2Q6P5Q4 547 aa20.09■□□□□ 0.81
DNMT3A-208ENST00000466601 TERF2IPQ9NYB0 399 aa20.09■□□□□ 0.81
DNMT3A-208ENST00000466601 USP6P35125 1406 aa20.09■□□□□ 0.81
DNMT3A-208ENST00000466601 TRPM3Q9HCF6 1732 aaPredicted RBP20.08■□□□□ 0.81
DNMT3A-208ENST00000466601 CD163L1Q9NR16 1453 aa20.08■□□□□ 0.81
DNMT3A-208ENST00000466601 BRD4O60885 1362 aaPredicted RBP20.08■□□□□ 0.8
DNMT3A-208ENST00000466601 KTN1Q86UP2 1357 aaKnown RBP20.08■□□□□ 0.8
DNMT3A-208ENST00000466601 SPATA31A6Q5VVP1 1343 aa20.07■□□□□ 0.8
DNMT3A-208ENST00000466601 SHPRHQ149N8 1683 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms