RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
CNOT4-208ENST00000465721 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.95■□□□□ 0.46
CNOT4-208ENST00000465721 ADAMTS2O95450 1211 aa17.94■□□□□ 0.46
CNOT4-208ENST00000465721 ORAI2Q96SN7 254 aa17.94■□□□□ 0.46
CNOT4-208ENST00000465721 ATRNO75882 1429 aa17.93■□□□□ 0.46
CNOT4-208ENST00000465721 PPARGC1BQ86YN6 1023 aaKnown RBP17.93■□□□□ 0.46
CNOT4-208ENST00000465721 PXDNQ92626 1479 aa17.93■□□□□ 0.46
CNOT4-208ENST00000465721 NGLY1Q96IV0 654 aa17.92■□□□□ 0.46
CNOT4-208ENST00000465721 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
CNOT4-208ENST00000465721 FMN2Q9NZ56 1722 aa17.9■□□□□ 0.46
CNOT4-208ENST00000465721 VGFO15240 615 aaPredicted RBP17.9■□□□□ 0.46
CNOT4-208ENST00000465721 FNBP4Q8N3X1 1017 aaPredicted RBP17.89■□□□□ 0.45
CNOT4-208ENST00000465721 USP21Q9UK80 565 aa17.89■□□□□ 0.45
CNOT4-208ENST00000465721 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
CNOT4-208ENST00000465721 RPGRIP1LQ68CZ1 1315 aa17.88■□□□□ 0.45
CNOT4-208ENST00000465721 KIF1AQ12756 1690 aa17.87■□□□□ 0.45
CNOT4-208ENST00000465721 RGPD8O14715 1765 aaPredicted RBP17.87■□□□□ 0.45
CNOT4-208ENST00000465721 BRWD3Q6RI45 1802 aa17.87■□□□□ 0.45
CNOT4-208ENST00000465721 TECPR2O15040 1411 aa17.87■□□□□ 0.45
CNOT4-208ENST00000465721 BCL9LQ86UU0 1499 aa17.86■□□□□ 0.45
CNOT4-208ENST00000465721 NPHP3Q7Z494 1330 aa17.85■□□□□ 0.45
CNOT4-208ENST00000465721 ABCA3Q99758 1704 aa17.84■□□□□ 0.45
CNOT4-208ENST00000465721 GLI3P10071 1580 aa17.84■□□□□ 0.45
CNOT4-208ENST00000465721 USP32Q8NFA0 1604 aa17.83■□□□□ 0.45
CNOT4-208ENST00000465721 SPATA31E1Q6ZUB1 1445 aa17.82■□□□□ 0.44
CNOT4-208ENST00000465721 PLCH1Q4KWH8 1693 aa17.82■□□□□ 0.44
CNOT4-208ENST00000465721 ADGRF5Q8IZF2 1346 aa17.8■□□□□ 0.44
CNOT4-208ENST00000465721 ESCO1Q5FWF5 840 aa17.8■□□□□ 0.44
CNOT4-208ENST00000465721 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
CNOT4-208ENST00000465721 LRPPRCP42704 1394 aaKnown RBP17.79■□□□□ 0.44
CNOT4-208ENST00000465721 SLIT2O94813 1529 aa17.79■□□□□ 0.44
CNOT4-208ENST00000465721 NWD2Q9ULI1 1742 aa17.79■□□□□ 0.44
CNOT4-208ENST00000465721 XPCQ01831 940 aaPredicted RBP17.79■□□□□ 0.44
CNOT4-208ENST00000465721 PIK3C2GO75747 1445 aa17.79■□□□□ 0.44
CNOT4-208ENST00000465721 CCDC144AA2RUR9 1427 aa17.78■□□□□ 0.44
CNOT4-208ENST00000465721 PLEKHH1Q9ULM0 1364 aa17.78■□□□□ 0.44
CNOT4-208ENST00000465721 FOXO3O43524 673 aa17.77■□□□□ 0.44
CNOT4-208ENST00000465721 ABCC11Q96J66 1382 aa17.77■□□□□ 0.43
CNOT4-208ENST00000465721 RALGAPBQ86X10 1494 aa17.76■□□□□ 0.43
CNOT4-208ENST00000465721 ANKRD30BQ9BXX2 1392 aa17.76■□□□□ 0.43
CNOT4-208ENST00000465721 WAPLQ7Z5K2 1190 aa17.75■□□□□ 0.43
CNOT4-208ENST00000465721 GJD4Q96KN9 370 aaPredicted RBP17.74■□□□□ 0.43
CNOT4-208ENST00000465721 SPATA31A3Q5VYP0 1347 aa17.73■□□□□ 0.43
CNOT4-208ENST00000465721 YTHDC2Q9H6S0 1430 aaKnown RBP17.73■□□□□ 0.43
CNOT4-208ENST00000465721 NUTM2FA1L443 756 aa17.73■□□□□ 0.43
CNOT4-208ENST00000465721 STK26Q9P289 416 aa17.73■□□□□ 0.43
CNOT4-208ENST00000465721 ZRANB1Q9UGI0 708 aa17.72■□□□□ 0.43
CNOT4-208ENST00000465721 NRAPQ86VF7 1730 aa17.72■□□□□ 0.43
CNOT4-208ENST00000465721 TNS3Q68CZ2 1445 aa17.72■□□□□ 0.43
CNOT4-208ENST00000465721 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
CNOT4-208ENST00000465721 CCDC125Q86Z20 511 aa17.71■□□□□ 0.43
CNOT4-208ENST00000465721 BLMP54132 1417 aaPredicted RBP17.71■□□□□ 0.43
CNOT4-208ENST00000465721 TRPM3Q9HCF6 1732 aaPredicted RBP17.7■□□□□ 0.42
CNOT4-208ENST00000465721 TMEM132EQ6IEE7 984 aa17.7■□□□□ 0.42
CNOT4-208ENST00000465721 UNC5CLQ8IV45 518 aa17.69■□□□□ 0.42
CNOT4-208ENST00000465721 ADGRB2O60241 1585 aa17.69■□□□□ 0.42
CNOT4-208ENST00000465721 LRP5O75197 1615 aa17.69■□□□□ 0.42
CNOT4-208ENST00000465721 RGL3Q3MIN7 710 aa17.68■□□□□ 0.42
CNOT4-208ENST00000465721 CRYBG1Q9Y4K1 1723 aa17.68■□□□□ 0.42
CNOT4-208ENST00000465721 ALS2Q96Q42 1657 aa17.67■□□□□ 0.42
CNOT4-208ENST00000465721 MSH5O43196 834 aa17.66■□□□□ 0.42
CNOT4-208ENST00000465721 KRT28Q7Z3Y7 464 aa17.65■□□□□ 0.42
CNOT4-208ENST00000465721 DLC1Q96QB1 1528 aa17.65■□□□□ 0.42
CNOT4-208ENST00000465721 SBNO1A3KN83 1393 aa17.64■□□□□ 0.41
CNOT4-208ENST00000465721 SIRT1Q96EB6 747 aa17.63■□□□□ 0.41
CNOT4-208ENST00000465721 MPHOSPH9Q99550 1183 aa17.63■□□□□ 0.41
CNOT4-208ENST00000465721 RGPD1P0DJD0 1748 aa17.62■□□□□ 0.41
CNOT4-208ENST00000465721 COL14A1Q05707 1796 aaKnown RBP17.62■□□□□ 0.41
CNOT4-208ENST00000465721 VPS72Q15906 364 aa17.62■□□□□ 0.41
CNOT4-208ENST00000465721 PHF8Q9UPP1 1060 aa17.62■□□□□ 0.41
CNOT4-208ENST00000465721 ANKARQ7Z5J8 1434 aa17.62■□□□□ 0.41
CNOT4-208ENST00000465721 ADGRB1O14514 1584 aa17.62■□□□□ 0.41
CNOT4-208ENST00000465721 DEFB132Q7Z7B7 95 aa17.61■□□□□ 0.41
CNOT4-208ENST00000465721 SEPT12Q8IYM1 358 aa17.61■□□□□ 0.41
CNOT4-208ENST00000465721 CABLES1Q8TDN4 633 aa17.61■□□□□ 0.41
CNOT4-208ENST00000465721 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
CNOT4-208ENST00000465721 ARHGEF10O15013 1369 aa17.61■□□□□ 0.41
CNOT4-208ENST00000465721 TNS1Q9HBL0 1735 aaKnown RBP17.61■□□□□ 0.41
CNOT4-208ENST00000465721 DHX57Q6P158 1386 aaKnown RBP17.59■□□□□ 0.41
CNOT4-208ENST00000465721 THSD7AQ9UPZ6 1657 aa17.58■□□□□ 0.41
CNOT4-208ENST00000465721 ONECUT3O60422 494 aaPredicted RBP17.58■□□□□ 0.4
CNOT4-208ENST00000465721 HAP1P54257 671 aaPredicted RBP17.58■□□□□ 0.4
CNOT4-208ENST00000465721 ITSN1Q15811 1721 aa17.58■□□□□ 0.4
CNOT4-208ENST00000465721 PSME1Q06323 249 aa17.57■□□□□ 0.4
CNOT4-208ENST00000465721 CFAP70Q5T0N1 1121 aa17.57■□□□□ 0.4
CNOT4-208ENST00000465721 PRAM1Q96QH2 718 aa17.56■□□□□ 0.4
CNOT4-208ENST00000465721 TULP4Q9NRJ4 1543 aa17.56■□□□□ 0.4
CNOT4-208ENST00000465721 ARHGEF28Q8N1W1 1705 aaKnown RBP17.55■□□□□ 0.4
CNOT4-208ENST00000465721 PHRF1Q9P1Y6 1649 aaKnown RBP17.55■□□□□ 0.4
CNOT4-208ENST00000465721 SAFB2Q14151 953 aaKnown RBP eCLIP17.55■□□□□ 0.4
CNOT4-208ENST00000465721 KRT27Q7Z3Y8 459 aa17.55■□□□□ 0.4
CNOT4-208ENST00000465721 PLEKHG5O94827 1062 aa17.54■□□□□ 0.4
CNOT4-208ENST00000465721 FAM83GA6ND36 823 aa17.53■□□□□ 0.4
CNOT4-208ENST00000465721 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
CNOT4-208ENST00000465721 CCDC9Q9Y3X0 531 aaKnown RBP17.53■□□□□ 0.4
CNOT4-208ENST00000465721 LMOD2Q6P5Q4 547 aa17.52■□□□□ 0.4
CNOT4-208ENST00000465721 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
CNOT4-208ENST00000465721 PRR36Q9H6K5 1346 aa17.51■□□□□ 0.39
CNOT4-208ENST00000465721 TOPAZ1Q8N9V7 1692 aa17.5■□□□□ 0.39
CNOT4-208ENST00000465721 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms