RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 NHSL1Q5SYE7 1610 aa22.02■■□□□ 1.11
MRPL55-225ENST00000465268 MEX3CQ5U5Q3 659 aaKnown RBP22.01■■□□□ 1.11
MRPL55-225ENST00000465268 NRXN1Q9ULB1 1477 aa22.01■■□□□ 1.11
MRPL55-225ENST00000465268 SHPRHQ149N8 1683 aa22■■□□□ 1.11
MRPL55-225ENST00000465268 PNPLA6Q8IY17 1366 aa21.99■■□□□ 1.11
MRPL55-225ENST00000465268 YTHDC2Q9H6S0 1430 aaKnown RBP21.99■■□□□ 1.11
MRPL55-225ENST00000465268 NUTM2FA1L443 756 aa21.99■■□□□ 1.11
MRPL55-225ENST00000465268 SOS2Q07890 1332 aaPredicted RBP21.99■■□□□ 1.11
MRPL55-225ENST00000465268 HRCP23327 699 aa21.98■■□□□ 1.11
MRPL55-225ENST00000465268 MYOM2P54296 1465 aa21.96■■□□□ 1.11
MRPL55-225ENST00000465268 ESCO1Q5FWF5 840 aa21.96■■□□□ 1.11
MRPL55-225ENST00000465268 CDC42BPGQ6DT37 1551 aa21.94■■□□□ 1.1
MRPL55-225ENST00000465268 XPCQ01831 940 aaPredicted RBP21.93■■□□□ 1.1
MRPL55-225ENST00000465268 KDM2AQ9Y2K7 1162 aa21.93■■□□□ 1.1
MRPL55-225ENST00000465268 ZNF772Q68DY9 489 aaPredicted RBP21.92■■□□□ 1.1
MRPL55-225ENST00000465268 SIRT1Q96EB6 747 aa21.92■■□□□ 1.1
MRPL55-225ENST00000465268 LAMC1P11047 1609 aa21.91■■□□□ 1.1
MRPL55-225ENST00000465268 AFF2P51816 1311 aa21.91■■□□□ 1.1
MRPL55-225ENST00000465268 FOXO3O43524 673 aa21.91■■□□□ 1.1
MRPL55-225ENST00000465268 DHX57Q6P158 1386 aaKnown RBP21.9■■□□□ 1.1
MRPL55-225ENST00000465268 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
MRPL55-225ENST00000465268 DCAF11Q8TEB1 546 aa21.9■■□□□ 1.1
MRPL55-225ENST00000465268 PRAM1Q96QH2 718 aa21.9■■□□□ 1.1
MRPL55-225ENST00000465268 ADAMTS2O95450 1211 aa21.89■■□□□ 1.09
MRPL55-225ENST00000465268 C8orf37Q96NL8 207 aa21.89■■□□□ 1.09
MRPL55-225ENST00000465268 KNDC1Q76NI1 1749 aa21.89■■□□□ 1.09
MRPL55-225ENST00000465268 PXDNQ92626 1479 aa21.87■■□□□ 1.09
MRPL55-225ENST00000465268 ADGRB1O14514 1584 aa21.87■■□□□ 1.09
MRPL55-225ENST00000465268 NPHP3Q7Z494 1330 aa21.86■■□□□ 1.09
MRPL55-225ENST00000465268 TRAK1Q9UPV9 953 aa21.85■■□□□ 1.09
MRPL55-225ENST00000465268 RXRBP28702 533 aa21.83■■□□□ 1.09
MRPL55-225ENST00000465268 NGLY1Q96IV0 654 aa21.81■■□□□ 1.08
MRPL55-225ENST00000465268 QTRT2Q9H974 415 aaKnown RBP21.81■■□□□ 1.08
MRPL55-225ENST00000465268 POGKQ9P215 609 aa21.81■■□□□ 1.08
MRPL55-225ENST00000465268 HIRIP3Q9BW71 556 aaPredicted RBP21.8■■□□□ 1.08
MRPL55-225ENST00000465268 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
MRPL55-225ENST00000465268 DLC1Q96QB1 1528 aa21.8■■□□□ 1.08
MRPL55-225ENST00000465268 KRT28Q7Z3Y7 464 aa21.78■■□□□ 1.08
MRPL55-225ENST00000465268 PHF8Q9UPP1 1060 aa21.78■■□□□ 1.08
MRPL55-225ENST00000465268 SPATA31A3Q5VYP0 1347 aa21.77■■□□□ 1.07
MRPL55-225ENST00000465268 MINK1Q8N4C8 1332 aaPredicted RBP21.77■■□□□ 1.07
MRPL55-225ENST00000465268 FNBP4Q8N3X1 1017 aaPredicted RBP21.76■■□□□ 1.07
MRPL55-225ENST00000465268 PMFBP1Q8TBY8 1022 aa21.75■■□□□ 1.07
MRPL55-225ENST00000465268 STAC3Q96MF2 364 aa21.75■■□□□ 1.07
MRPL55-225ENST00000465268 COL22A1Q8NFW1 1626 aaPredicted RBP21.75■■□□□ 1.07
MRPL55-225ENST00000465268 PRR36Q9H6K5 1346 aa21.75■■□□□ 1.07
MRPL55-225ENST00000465268 USP21Q9UK80 565 aa21.74■■□□□ 1.07
MRPL55-225ENST00000465268 RBM6P78332 1123 aaKnown RBP21.73■■□□□ 1.07
MRPL55-225ENST00000465268 UPF1Q92900 1129 aaKnown RBP eCLIP21.73■■□□□ 1.07
MRPL55-225ENST00000465268 RGS12O14924 1447 aa21.72■■□□□ 1.07
MRPL55-225ENST00000465268 CDK12Q9NYV4 1490 aaPredicted RBP21.71■■□□□ 1.07
MRPL55-225ENST00000465268 USP32Q8NFA0 1604 aa21.7■■□□□ 1.06
MRPL55-225ENST00000465268 WASLO00401 505 aaPredicted RBP21.7■■□□□ 1.06
MRPL55-225ENST00000465268 PLEKHG5O94827 1062 aa21.7■■□□□ 1.06
MRPL55-225ENST00000465268 NBPF1Q3BBV0 1214 aa21.7■■□□□ 1.06
MRPL55-225ENST00000465268 CABLES1Q8TDN4 633 aa21.7■■□□□ 1.06
MRPL55-225ENST00000465268 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
MRPL55-225ENST00000465268 BCL9LQ86UU0 1499 aa21.69■■□□□ 1.06
MRPL55-225ENST00000465268 ADGRB2O60241 1585 aa21.69■■□□□ 1.06
MRPL55-225ENST00000465268 KIF1AQ12756 1690 aa21.68■■□□□ 1.06
MRPL55-225ENST00000465268 RGPD8O14715 1765 aaPredicted RBP21.67■■□□□ 1.06
MRPL55-225ENST00000465268 ATRNO75882 1429 aa21.67■■□□□ 1.06
MRPL55-225ENST00000465268 TNS3Q68CZ2 1445 aa21.67■■□□□ 1.06
MRPL55-225ENST00000465268 PSME1Q06323 249 aa21.67■■□□□ 1.06
MRPL55-225ENST00000465268 SIN3AQ96ST3 1273 aa21.67■■□□□ 1.06
MRPL55-225ENST00000465268 TRPC5Q9UL62 973 aaPredicted RBP21.67■■□□□ 1.06
MRPL55-225ENST00000465268 SBNO1A3KN83 1393 aa21.65■■□□□ 1.06
MRPL55-225ENST00000465268 LMOD2Q6P5Q4 547 aa21.64■■□□□ 1.05
MRPL55-225ENST00000465268 L3MBTL2Q969R5 705 aa21.63■■□□□ 1.05
MRPL55-225ENST00000465268 TULP4Q9NRJ4 1543 aa21.63■■□□□ 1.05
MRPL55-225ENST00000465268 SLIT2O94813 1529 aa21.6■■□□□ 1.05
MRPL55-225ENST00000465268 NUDT16Q96DE0 195 aaKnown RBP21.6■■□□□ 1.05
MRPL55-225ENST00000465268 CDK19Q9BWU1 502 aa21.6■■□□□ 1.05
MRPL55-225ENST00000465268 UNC5CLQ8IV45 518 aa21.59■■□□□ 1.05
MRPL55-225ENST00000465268 ARHGEF28Q8N1W1 1705 aaKnown RBP21.59■■□□□ 1.05
MRPL55-225ENST00000465268 GJD4Q96KN9 370 aaPredicted RBP21.58■■□□□ 1.05
MRPL55-225ENST00000465268 ARHGEF10O15013 1369 aa21.58■■□□□ 1.04
MRPL55-225ENST00000465268 EIF3AQ14152 1382 aaKnown RBP21.58■■□□□ 1.04
MRPL55-225ENST00000465268 ATP7BP35670 1465 aa21.58■■□□□ 1.04
MRPL55-225ENST00000465268 HAP1P54257 671 aaPredicted RBP21.57■■□□□ 1.04
MRPL55-225ENST00000465268 NEUROD1Q13562 356 aa21.57■■□□□ 1.04
MRPL55-225ENST00000465268 NGDNQ8NEJ9 315 aaKnown RBP21.57■■□□□ 1.04
MRPL55-225ENST00000465268 FAM83GA6ND36 823 aa21.56■■□□□ 1.04
MRPL55-225ENST00000465268 GPRASP1Q5JY77 1395 aa21.56■■□□□ 1.04
MRPL55-225ENST00000465268 TRPM3Q9HCF6 1732 aaPredicted RBP21.54■■□□□ 1.04
MRPL55-225ENST00000465268 RALGAPBQ86X10 1494 aa21.53■■□□□ 1.04
MRPL55-225ENST00000465268 MARF1Q9Y4F3 1742 aaKnown RBP21.53■■□□□ 1.04
MRPL55-225ENST00000465268 PAK3O75914 559 aaPredicted RBP21.52■■□□□ 1.04
MRPL55-225ENST00000465268 KIAA1210Q9ULL0 1709 aa21.52■■□□□ 1.03
MRPL55-225ENST00000465268 CENPJQ9HC77 1338 aaPredicted RBP21.51■■□□□ 1.03
MRPL55-225ENST00000465268 GLI3P10071 1580 aa21.5■■□□□ 1.03
MRPL55-225ENST00000465268 CCDC61Q9Y6R9 512 aa21.5■■□□□ 1.03
MRPL55-225ENST00000465268 ACEP12821 1306 aa21.5■■□□□ 1.03
MRPL55-225ENST00000465268 VPS72Q15906 364 aa21.49■■□□□ 1.03
MRPL55-225ENST00000465268 NBPF8Q3BBV2 869 aa21.49■■□□□ 1.03
MRPL55-225ENST00000465268 CABP2Q9NPB3 220 aa21.49■■□□□ 1.03
MRPL55-225ENST00000465268 ATAD2Q6PL18 1390 aa21.48■■□□□ 1.03
MRPL55-225ENST00000465268 ALS2Q96Q42 1657 aa21.48■■□□□ 1.03
MRPL55-225ENST00000465268 PLEKHG3A1L390 1219 aa21.48■■□□□ 1.03
MRPL55-225ENST00000465268 NUTM2GQ5VZR2 741 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms