RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 UBAP1LF5GYI3 381 aa16.51■□□□□ 0.23
SEC61A1-203ENST00000464451 YTHDC2Q9H6S0 1430 aaKnown RBP16.51■□□□□ 0.23
SEC61A1-203ENST00000464451 WAPLQ7Z5K2 1190 aa16.5■□□□□ 0.23
SEC61A1-203ENST00000464451 LAMC1P11047 1609 aa16.5■□□□□ 0.23
SEC61A1-203ENST00000464451 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
SEC61A1-203ENST00000464451 TRAK1Q9UPV9 953 aa16.5■□□□□ 0.23
SEC61A1-203ENST00000464451 LRPPRCP42704 1394 aaKnown RBP16.5■□□□□ 0.23
SEC61A1-203ENST00000464451 POLR3GLQ9BT43 218 aa16.49■□□□□ 0.23
SEC61A1-203ENST00000464451 ADGRB1O14514 1584 aa16.48■□□□□ 0.23
SEC61A1-203ENST00000464451 PIP4K2BP78356 416 aa16.48■□□□□ 0.23
SEC61A1-203ENST00000464451 SAFB2Q14151 953 aaKnown RBP eCLIP16.48■□□□□ 0.23
SEC61A1-203ENST00000464451 TRPM1Q7Z4N2 1603 aa16.47■□□□□ 0.23
SEC61A1-203ENST00000464451 IQSEC2Q5JU85 1478 aa16.47■□□□□ 0.23
SEC61A1-203ENST00000464451 GPRASP1Q5JY77 1395 aa16.47■□□□□ 0.23
SEC61A1-203ENST00000464451 PLEKHH1Q9ULM0 1364 aa16.47■□□□□ 0.23
SEC61A1-203ENST00000464451 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
SEC61A1-203ENST00000464451 MSH6P52701 1360 aa16.46■□□□□ 0.23
SEC61A1-203ENST00000464451 ABCC11Q96J66 1382 aa16.46■□□□□ 0.23
SEC61A1-203ENST00000464451 FBXO41Q8TF61 875 aa16.46■□□□□ 0.22
SEC61A1-203ENST00000464451 PTCH1Q13635 1447 aa16.45■□□□□ 0.22
SEC61A1-203ENST00000464451 PRAM1Q96QH2 718 aa16.45■□□□□ 0.22
SEC61A1-203ENST00000464451 TOM1O60784 492 aa16.44■□□□□ 0.22
SEC61A1-203ENST00000464451 ZBED9Q6R2W3 1325 aa16.44■□□□□ 0.22
SEC61A1-203ENST00000464451 ILDR1Q86SU0 546 aaPredicted RBP16.44■□□□□ 0.22
SEC61A1-203ENST00000464451 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
SEC61A1-203ENST00000464451 POGKQ9P215 609 aa16.43■□□□□ 0.22
SEC61A1-203ENST00000464451 TECPR2O15040 1411 aa16.43■□□□□ 0.22
SEC61A1-203ENST00000464451 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
SEC61A1-203ENST00000464451 KTN1Q86UP2 1357 aaKnown RBP16.42■□□□□ 0.22
SEC61A1-203ENST00000464451 ATF3P18847 181 aa16.42■□□□□ 0.22
SEC61A1-203ENST00000464451 KNDC1Q76NI1 1749 aa16.42■□□□□ 0.22
SEC61A1-203ENST00000464451 NALCNQ8IZF0 1738 aa16.42■□□□□ 0.22
SEC61A1-203ENST00000464451 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.41■□□□□ 0.22
SEC61A1-203ENST00000464451 NCOA3Q9Y6Q9 1424 aa16.4■□□□□ 0.22
SEC61A1-203ENST00000464451 ADGRL3Q9HAR2 1447 aa16.4■□□□□ 0.22
SEC61A1-203ENST00000464451 NUTM2FA1L443 756 aa16.39■□□□□ 0.21
SEC61A1-203ENST00000464451 SLAIN2Q9P270 581 aa16.39■□□□□ 0.21
SEC61A1-203ENST00000464451 MINK1Q8N4C8 1332 aaPredicted RBP16.38■□□□□ 0.21
SEC61A1-203ENST00000464451 FAM135BQ49AJ0 1406 aa16.38■□□□□ 0.21
SEC61A1-203ENST00000464451 RALBP1Q15311 655 aa16.37■□□□□ 0.21
SEC61A1-203ENST00000464451 CADPS2Q86UW7 1296 aa16.37■□□□□ 0.21
SEC61A1-203ENST00000464451 SIRT1Q96EB6 747 aa16.37■□□□□ 0.21
SEC61A1-203ENST00000464451 DLC1Q96QB1 1528 aa16.37■□□□□ 0.21
SEC61A1-203ENST00000464451 ARHGEF28Q8N1W1 1705 aaKnown RBP16.36■□□□□ 0.21
SEC61A1-203ENST00000464451 CNGB1Q14028 1251 aaPredicted RBP16.34■□□□□ 0.21
SEC61A1-203ENST00000464451 ERICH6BQ5W0A0 696 aa16.34■□□□□ 0.21
SEC61A1-203ENST00000464451 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
SEC61A1-203ENST00000464451 TESK2Q96S53 571 aa16.34■□□□□ 0.21
SEC61A1-203ENST00000464451 MYBBP1AQ9BQG0 1328 aaKnown RBP16.34■□□□□ 0.21
SEC61A1-203ENST00000464451 PNISRQ8TF01 805 aaKnown RBP16.33■□□□□ 0.21
SEC61A1-203ENST00000464451 BRD4O60885 1362 aaPredicted RBP16.33■□□□□ 0.2
SEC61A1-203ENST00000464451 TSHZ2Q9NRE2 1034 aa16.33■□□□□ 0.2
SEC61A1-203ENST00000464451 DCCP43146 1447 aa16.32■□□□□ 0.2
SEC61A1-203ENST00000464451 MST1RQ04912 1400 aa16.32■□□□□ 0.2
SEC61A1-203ENST00000464451 CENPJQ9HC77 1338 aaPredicted RBP16.31■□□□□ 0.2
SEC61A1-203ENST00000464451 ROBO1Q9Y6N7 1651 aa16.31■□□□□ 0.2
SEC61A1-203ENST00000464451 HSPA1LP34931 641 aa16.31■□□□□ 0.2
SEC61A1-203ENST00000464451 TMF1P82094 1093 aa16.31■□□□□ 0.2
SEC61A1-203ENST00000464451 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
SEC61A1-203ENST00000464451 CDC42BPGQ6DT37 1551 aa16.3■□□□□ 0.2
SEC61A1-203ENST00000464451 DISP3Q9P2K9 1392 aa16.29■□□□□ 0.2
SEC61A1-203ENST00000464451 BRINP3Q76B58 766 aa16.29■□□□□ 0.2
SEC61A1-203ENST00000464451 DDX17Q92841 729 aaKnown RBP16.29■□□□□ 0.2
SEC61A1-203ENST00000464451 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
SEC61A1-203ENST00000464451 PER1O15534 1290 aaPredicted RBP16.29■□□□□ 0.2
SEC61A1-203ENST00000464451 ESCO1Q5FWF5 840 aa16.29■□□□□ 0.2
SEC61A1-203ENST00000464451 PARD3Q8TEW0 1356 aa16.28■□□□□ 0.2
SEC61A1-203ENST00000464451 WASLO00401 505 aaPredicted RBP16.27■□□□□ 0.2
SEC61A1-203ENST00000464451 SMG6Q86US8 1419 aaKnown RBP16.27■□□□□ 0.19
SEC61A1-203ENST00000464451 QRICH2Q9H0J4 1663 aa16.27■□□□□ 0.19
SEC61A1-203ENST00000464451 NLRP13Q86W25 1043 aa16.27■□□□□ 0.19
SEC61A1-203ENST00000464451 CDK19Q9BWU1 502 aa16.27■□□□□ 0.19
SEC61A1-203ENST00000464451 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
SEC61A1-203ENST00000464451 FMN2Q9NZ56 1722 aa16.26■□□□□ 0.19
SEC61A1-203ENST00000464451 ADGRB2O60241 1585 aa16.25■□□□□ 0.19
SEC61A1-203ENST00000464451 PRR36Q9H6K5 1346 aa16.24■□□□□ 0.19
SEC61A1-203ENST00000464451 SRPK2P78362 688 aaKnown RBP16.24■□□□□ 0.19
SEC61A1-203ENST00000464451 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
SEC61A1-203ENST00000464451 RGPD8O14715 1765 aaPredicted RBP16.24■□□□□ 0.19
SEC61A1-203ENST00000464451 IRX6P78412 446 aaPredicted RBP16.23■□□□□ 0.19
SEC61A1-203ENST00000464451 PANK3Q9H999 370 aa16.23■□□□□ 0.19
SEC61A1-203ENST00000464451 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
SEC61A1-203ENST00000464451 CDCA8Q53HL2 280 aa16.22■□□□□ 0.19
SEC61A1-203ENST00000464451 PMFBP1Q8TBY8 1022 aa16.22■□□□□ 0.19
SEC61A1-203ENST00000464451 NUDCQ9Y266 331 aa16.22■□□□□ 0.19
SEC61A1-203ENST00000464451 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
SEC61A1-203ENST00000464451 FOXO3O43524 673 aa16.22■□□□□ 0.19
SEC61A1-203ENST00000464451 NUDT16Q96DE0 195 aaKnown RBP16.21■□□□□ 0.19
SEC61A1-203ENST00000464451 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
SEC61A1-203ENST00000464451 TULP4Q9NRJ4 1543 aa16.2■□□□□ 0.18
SEC61A1-203ENST00000464451 PHLPP1O60346 1717 aa16.2■□□□□ 0.18
SEC61A1-203ENST00000464451 PHF8Q9UPP1 1060 aa16.2■□□□□ 0.18
SEC61A1-203ENST00000464451 EVC2Q86UK5 1308 aa16.19■□□□□ 0.18
SEC61A1-203ENST00000464451 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
SEC61A1-203ENST00000464451 ANKARQ7Z5J8 1434 aa16.18■□□□□ 0.18
SEC61A1-203ENST00000464451 ATP7BP35670 1465 aa16.18■□□□□ 0.18
SEC61A1-203ENST00000464451 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
SEC61A1-203ENST00000464451 INSRP06213 1382 aa16.17■□□□□ 0.18
SEC61A1-203ENST00000464451 AHDC1Q5TGY3 1603 aaPredicted RBP16.16■□□□□ 0.18
SEC61A1-203ENST00000464451 NHSL1Q5SYE7 1610 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms