RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
CTDSP1-206ENST00000464255 YTHDC2Q9H6S0 1430 aaKnown RBP19.29■□□□□ 0.68
CTDSP1-206ENST00000464255 SIRT1Q96EB6 747 aa19.28■□□□□ 0.68
CTDSP1-206ENST00000464255 LAMC1P11047 1609 aa19.27■□□□□ 0.68
CTDSP1-206ENST00000464255 LRRC59Q96AG4 307 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-206ENST00000464255 SOS2Q07890 1332 aaPredicted RBP19.25■□□□□ 0.67
CTDSP1-206ENST00000464255 CDC42BPGQ6DT37 1551 aa19.25■□□□□ 0.67
CTDSP1-206ENST00000464255 DHX57Q6P158 1386 aaKnown RBP19.24■□□□□ 0.67
CTDSP1-206ENST00000464255 PNPLA6Q8IY17 1366 aa19.24■□□□□ 0.67
CTDSP1-206ENST00000464255 KNDC1Q76NI1 1749 aa19.24■□□□□ 0.67
CTDSP1-206ENST00000464255 NUTM2BA6NNL0 878 aaPredicted RBP19.22■□□□□ 0.67
CTDSP1-206ENST00000464255 NUTM2EB1AL46 878 aaPredicted RBP19.22■□□□□ 0.67
CTDSP1-206ENST00000464255 NUTM2AQ8IVF1 878 aaPredicted RBP19.22■□□□□ 0.67
CTDSP1-206ENST00000464255 ESCO1Q5FWF5 840 aa19.21■□□□□ 0.67
CTDSP1-206ENST00000464255 DCAF11Q8TEB1 546 aa19.21■□□□□ 0.67
CTDSP1-206ENST00000464255 KDM2AQ9Y2K7 1162 aa19.21■□□□□ 0.67
CTDSP1-206ENST00000464255 ADGRB1O14514 1584 aa19.2■□□□□ 0.66
CTDSP1-206ENST00000464255 NUTM2FA1L443 756 aa19.19■□□□□ 0.66
CTDSP1-206ENST00000464255 MEX3CQ5U5Q3 659 aaKnown RBP19.19■□□□□ 0.66
CTDSP1-206ENST00000464255 PRAM1Q96QH2 718 aa19.19■□□□□ 0.66
CTDSP1-206ENST00000464255 FOXO3O43524 673 aa19.18■□□□□ 0.66
CTDSP1-206ENST00000464255 PXDNQ92626 1479 aa19.17■□□□□ 0.66
CTDSP1-206ENST00000464255 STAC3Q96MF2 364 aa19.17■□□□□ 0.66
CTDSP1-206ENST00000464255 ZNF772Q68DY9 489 aaPredicted RBP19.16■□□□□ 0.66
CTDSP1-206ENST00000464255 DLC1Q96QB1 1528 aa19.15■□□□□ 0.66
CTDSP1-206ENST00000464255 XPCQ01831 940 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-206ENST00000464255 NPHP3Q7Z494 1330 aa19.15■□□□□ 0.66
CTDSP1-206ENST00000464255 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.66
CTDSP1-206ENST00000464255 SAFB2Q14151 953 aaKnown RBP eCLIP19.14■□□□□ 0.65
CTDSP1-206ENST00000464255 TRAK1Q9UPV9 953 aa19.13■□□□□ 0.65
CTDSP1-206ENST00000464255 AFF2P51816 1311 aa19.13■□□□□ 0.65
CTDSP1-206ENST00000464255 C8orf37Q96NL8 207 aa19.11■□□□□ 0.65
CTDSP1-206ENST00000464255 ADAMTS2O95450 1211 aa19.1■□□□□ 0.65
CTDSP1-206ENST00000464255 POGKQ9P215 609 aa19.1■□□□□ 0.65
CTDSP1-206ENST00000464255 COL22A1Q8NFW1 1626 aaPredicted RBP19.09■□□□□ 0.65
CTDSP1-206ENST00000464255 PHF8Q9UPP1 1060 aa19.08■□□□□ 0.64
CTDSP1-206ENST00000464255 SPATA31A3Q5VYP0 1347 aa19.07■□□□□ 0.64
CTDSP1-206ENST00000464255 RGPD8O14715 1765 aaPredicted RBP19.07■□□□□ 0.64
CTDSP1-206ENST00000464255 RXRBP28702 533 aa19.07■□□□□ 0.64
CTDSP1-206ENST00000464255 KRT28Q7Z3Y7 464 aa19.07■□□□□ 0.64
CTDSP1-206ENST00000464255 HIRIP3Q9BW71 556 aaPredicted RBP19.07■□□□□ 0.64
CTDSP1-206ENST00000464255 FNBP4Q8N3X1 1017 aaPredicted RBP19.06■□□□□ 0.64
CTDSP1-206ENST00000464255 NGLY1Q96IV0 654 aa19.06■□□□□ 0.64
CTDSP1-206ENST00000464255 QTRT2Q9H974 415 aaKnown RBP19.06■□□□□ 0.64
CTDSP1-206ENST00000464255 USP32Q8NFA0 1604 aa19.06■□□□□ 0.64
CTDSP1-206ENST00000464255 ADGRB2O60241 1585 aa19.06■□□□□ 0.64
CTDSP1-206ENST00000464255 MINK1Q8N4C8 1332 aaPredicted RBP19.05■□□□□ 0.64
CTDSP1-206ENST00000464255 PRR36Q9H6K5 1346 aa19.05■□□□□ 0.64
CTDSP1-206ENST00000464255 NBPF1Q3BBV0 1214 aa19.04■□□□□ 0.64
CTDSP1-206ENST00000464255 KIF1AQ12756 1690 aa19.04■□□□□ 0.64
CTDSP1-206ENST00000464255 ANKARQ7Z5J8 1434 aa19.03■□□□□ 0.64
CTDSP1-206ENST00000464255 WASLO00401 505 aaPredicted RBP19.03■□□□□ 0.64
CTDSP1-206ENST00000464255 SIN3AQ96ST3 1273 aa19.02■□□□□ 0.64
CTDSP1-206ENST00000464255 PMFBP1Q8TBY8 1022 aa19.01■□□□□ 0.63
CTDSP1-206ENST00000464255 CDK12Q9NYV4 1490 aaPredicted RBP19.01■□□□□ 0.63
CTDSP1-206ENST00000464255 RBM6P78332 1123 aaKnown RBP19■□□□□ 0.63
CTDSP1-206ENST00000464255 L3MBTL2Q969R5 705 aa19■□□□□ 0.63
CTDSP1-206ENST00000464255 USP21Q9UK80 565 aa19■□□□□ 0.63
CTDSP1-206ENST00000464255 BCL9LQ86UU0 1499 aa18.99■□□□□ 0.63
CTDSP1-206ENST00000464255 SBNO1A3KN83 1393 aa18.99■□□□□ 0.63
CTDSP1-206ENST00000464255 ARHGEF28Q8N1W1 1705 aaKnown RBP18.99■□□□□ 0.63
CTDSP1-206ENST00000464255 PSME1Q06323 249 aa18.98■□□□□ 0.63
CTDSP1-206ENST00000464255 TNS3Q68CZ2 1445 aa18.98■□□□□ 0.63
CTDSP1-206ENST00000464255 KIAA1210Q9ULL0 1709 aa18.97■□□□□ 0.63
CTDSP1-206ENST00000464255 TULP4Q9NRJ4 1543 aa18.97■□□□□ 0.63
CTDSP1-206ENST00000464255 CABLES1Q8TDN4 633 aa18.96■□□□□ 0.63
CTDSP1-206ENST00000464255 UPF1Q92900 1129 aaKnown RBP eCLIP18.96■□□□□ 0.631e-6■■■■□ 22.4
CTDSP1-206ENST00000464255 RGS12O14924 1447 aa18.96■□□□□ 0.63
CTDSP1-206ENST00000464255 ATRNO75882 1429 aa18.96■□□□□ 0.63
CTDSP1-206ENST00000464255 TRPC5Q9UL62 973 aaPredicted RBP18.95■□□□□ 0.62
CTDSP1-206ENST00000464255 NUDT16Q96DE0 195 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-206ENST00000464255 CDK19Q9BWU1 502 aa18.94■□□□□ 0.62
CTDSP1-206ENST00000464255 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
CTDSP1-206ENST00000464255 MARF1Q9Y4F3 1742 aaKnown RBP18.93■□□□□ 0.62
CTDSP1-206ENST00000464255 ATP7BP35670 1465 aa18.92■□□□□ 0.62
CTDSP1-206ENST00000464255 TRPM3Q9HCF6 1732 aaPredicted RBP18.92■□□□□ 0.62
CTDSP1-206ENST00000464255 SLIT2O94813 1529 aa18.92■□□□□ 0.62
CTDSP1-206ENST00000464255 NEUROD1Q13562 356 aa18.91■□□□□ 0.62
CTDSP1-206ENST00000464255 ARHGEF10O15013 1369 aa18.91■□□□□ 0.62
CTDSP1-206ENST00000464255 LMOD2Q6P5Q4 547 aa18.89■□□□□ 0.61
CTDSP1-206ENST00000464255 UNC5CLQ8IV45 518 aa18.89■□□□□ 0.61
CTDSP1-206ENST00000464255 FAM83GA6ND36 823 aa18.88■□□□□ 0.61
CTDSP1-206ENST00000464255 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
CTDSP1-206ENST00000464255 NGDNQ8NEJ9 315 aaKnown RBP18.88■□□□□ 0.61
CTDSP1-206ENST00000464255 GJD4Q96KN9 370 aaPredicted RBP18.88■□□□□ 0.61
CTDSP1-206ENST00000464255 GPRASP1Q5JY77 1395 aa18.88■□□□□ 0.61
CTDSP1-206ENST00000464255 ALS2Q96Q42 1657 aa18.88■□□□□ 0.61
CTDSP1-206ENST00000464255 PLEKHG3A1L390 1219 aa18.87■□□□□ 0.61
CTDSP1-206ENST00000464255 EP400Q96L91 3159 aa18.87■□□□□ 0.61
CTDSP1-206ENST00000464255 POLR3AO14802 1390 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-206ENST00000464255 CENPJQ9HC77 1338 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-206ENST00000464255 NBPF8Q3BBV2 869 aa18.86■□□□□ 0.61
CTDSP1-206ENST00000464255 CCDC61Q9Y6R9 512 aa18.86■□□□□ 0.61
CTDSP1-206ENST00000464255 ABCA3Q99758 1704 aa18.86■□□□□ 0.61
CTDSP1-206ENST00000464255 ACEP12821 1306 aa18.84■□□□□ 0.61
CTDSP1-206ENST00000464255 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.83■□□□□ 0.61
CTDSP1-206ENST00000464255 HAP1P54257 671 aaPredicted RBP18.83■□□□□ 0.6
CTDSP1-206ENST00000464255 CABP2Q9NPB3 220 aa18.83■□□□□ 0.6
CTDSP1-206ENST00000464255 RALGAPBQ86X10 1494 aa18.83■□□□□ 0.6
CTDSP1-206ENST00000464255 TOPAZ1Q8N9V7 1692 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms