RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 PLEKHH1Q9ULM0 1364 aa28.3■■■□□ 2.12
CCHCR1-210ENST00000464012 CFAP70Q5T0N1 1121 aa28.3■■■□□ 2.12
CCHCR1-210ENST00000464012 MEX3CQ5U5Q3 659 aaKnown RBP28.3■■■□□ 2.12
CCHCR1-210ENST00000464012 ORAI2Q96SN7 254 aa28.29■■■□□ 2.12
CCHCR1-210ENST00000464012 C14orf93Q9H972 538 aaKnown RBP28.28■■■□□ 2.12
CCHCR1-210ENST00000464012 NUTM2BA6NNL0 878 aaPredicted RBP28.27■■■□□ 2.12
CCHCR1-210ENST00000464012 NUTM2EB1AL46 878 aaPredicted RBP28.27■■■□□ 2.12
CCHCR1-210ENST00000464012 POTEAQ6S8J7 498 aa28.27■■■□□ 2.12
CCHCR1-210ENST00000464012 NUTM2AQ8IVF1 878 aaPredicted RBP28.27■■■□□ 2.12
CCHCR1-210ENST00000464012 FMN2Q9NZ56 1722 aa28.26■■■□□ 2.12
CCHCR1-210ENST00000464012 DHX57Q6P158 1386 aaKnown RBP28.24■■■□□ 2.11
CCHCR1-210ENST00000464012 LRRC59Q96AG4 307 aaKnown RBP28.24■■■□□ 2.11
CCHCR1-210ENST00000464012 KDM2AQ9Y2K7 1162 aa28.24■■■□□ 2.11
CCHCR1-210ENST00000464012 NUTM2FA1L443 756 aa28.23■■■□□ 2.11
CCHCR1-210ENST00000464012 PNPLA6Q8IY17 1366 aa28.22■■■□□ 2.11
CCHCR1-210ENST00000464012 DCAF11Q8TEB1 546 aa28.21■■■□□ 2.11
CCHCR1-210ENST00000464012 RGPD8O14715 1765 aaPredicted RBP28.21■■■□□ 2.11
CCHCR1-210ENST00000464012 ESCO1Q5FWF5 840 aa28.2■■■□□ 2.1
CCHCR1-210ENST00000464012 ADGRB1O14514 1584 aa28.19■■■□□ 2.1
CCHCR1-210ENST00000464012 SAFB2Q14151 953 aaKnown RBP eCLIP28.17■■■□□ 2.1
CCHCR1-210ENST00000464012 SOS2Q07890 1332 aaPredicted RBP28.16■■■□□ 2.1
CCHCR1-210ENST00000464012 DLC1Q96QB1 1528 aa28.15■■■□□ 2.1
CCHCR1-210ENST00000464012 KIF1AQ12756 1690 aa28.15■■■□□ 2.1
CCHCR1-210ENST00000464012 PRAM1Q96QH2 718 aa28.14■■■□□ 2.1
CCHCR1-210ENST00000464012 SIRT1Q96EB6 747 aa28.13■■■□□ 2.09
CCHCR1-210ENST00000464012 PXDNQ92626 1479 aa28.12■■■□□ 2.09
CCHCR1-210ENST00000464012 NPHP3Q7Z494 1330 aa28.12■■■□□ 2.09
CCHCR1-210ENST00000464012 XPCQ01831 940 aaPredicted RBP28.11■■■□□ 2.09
CCHCR1-210ENST00000464012 COL22A1Q8NFW1 1626 aaPredicted RBP28.1■■■□□ 2.09
CCHCR1-210ENST00000464012 ZNF772Q68DY9 489 aaPredicted RBP28.1■■■□□ 2.09
CCHCR1-210ENST00000464012 POGKQ9P215 609 aa28.1■■■□□ 2.09
CCHCR1-210ENST00000464012 TRAK1Q9UPV9 953 aa28.1■■■□□ 2.09
CCHCR1-210ENST00000464012 FOXO3O43524 673 aa28.09■■■□□ 2.09
CCHCR1-210ENST00000464012 ARHGEF28Q8N1W1 1705 aaKnown RBP28.09■■■□□ 2.09
CCHCR1-210ENST00000464012 C8orf37Q96NL8 207 aa28.08■■■□□ 2.09
CCHCR1-210ENST00000464012 AFF2P51816 1311 aa28.08■■■□□ 2.09
CCHCR1-210ENST00000464012 ADGRB2O60241 1585 aa28.07■■■□□ 2.08
CCHCR1-210ENST00000464012 ADAMTS2O95450 1211 aa28.06■■■□□ 2.08
CCHCR1-210ENST00000464012 USP32Q8NFA0 1604 aa28.05■■■□□ 2.08
CCHCR1-210ENST00000464012 STAC3Q96MF2 364 aa28.05■■■□□ 2.08
CCHCR1-210ENST00000464012 MARF1Q9Y4F3 1742 aaKnown RBP28.04■■■□□ 2.08
CCHCR1-210ENST00000464012 KIAA1210Q9ULL0 1709 aa28.03■■■□□ 2.08
CCHCR1-210ENST00000464012 HIRIP3Q9BW71 556 aaPredicted RBP28.02■■■□□ 2.08
CCHCR1-210ENST00000464012 MINK1Q8N4C8 1332 aaPredicted RBP28.01■■■□□ 2.07
CCHCR1-210ENST00000464012 PHF8Q9UPP1 1060 aa27.98■■■□□ 2.07
CCHCR1-210ENST00000464012 NGLY1Q96IV0 654 aa27.97■■■□□ 2.07
CCHCR1-210ENST00000464012 ANKARQ7Z5J8 1434 aa27.96■■■□□ 2.07
CCHCR1-210ENST00000464012 RXRBP28702 533 aa27.95■■■□□ 2.06
CCHCR1-210ENST00000464012 KRT28Q7Z3Y7 464 aa27.95■■■□□ 2.06
CCHCR1-210ENST00000464012 TULP4Q9NRJ4 1543 aa27.94■■■□□ 2.06
CCHCR1-210ENST00000464012 PMFBP1Q8TBY8 1022 aa27.92■■■□□ 2.06
CCHCR1-210ENST00000464012 ITSN1Q15811 1721 aa27.92■■■□□ 2.06
CCHCR1-210ENST00000464012 SPATA31A3Q5VYP0 1347 aa27.92■■■□□ 2.06
CCHCR1-210ENST00000464012 TNS3Q68CZ2 1445 aa27.91■■■□□ 2.06
CCHCR1-210ENST00000464012 EIF3AQ14152 1382 aaKnown RBP27.9■■■□□ 2.06
CCHCR1-210ENST00000464012 QTRT2Q9H974 415 aaKnown RBP27.9■■■□□ 2.06
CCHCR1-210ENST00000464012 ABCA3Q99758 1704 aa27.89■■■□□ 2.06
CCHCR1-210ENST00000464012 WASLO00401 505 aaPredicted RBP27.88■■■□□ 2.05
CCHCR1-210ENST00000464012 SIN3AQ96ST3 1273 aa27.88■■■□□ 2.05
CCHCR1-210ENST00000464012 TRPM3Q9HCF6 1732 aaPredicted RBP27.88■■■□□ 2.05
CCHCR1-210ENST00000464012 USP21Q9UK80 565 aa27.88■■■□□ 2.05
CCHCR1-210ENST00000464012 CDK12Q9NYV4 1490 aaPredicted RBP27.88■■■□□ 2.05
CCHCR1-210ENST00000464012 PRR36Q9H6K5 1346 aa27.88■■■□□ 2.05
CCHCR1-210ENST00000464012 PLEKHG5O94827 1062 aa27.87■■■□□ 2.05
CCHCR1-210ENST00000464012 PSME1Q06323 249 aa27.87■■■□□ 2.05
CCHCR1-210ENST00000464012 NBPF1Q3BBV0 1214 aa27.86■■■□□ 2.05
CCHCR1-210ENST00000464012 LMOD2Q6P5Q4 547 aa27.85■■■□□ 2.05
CCHCR1-210ENST00000464012 RGS12O14924 1447 aa27.84■■■□□ 2.05
CCHCR1-210ENST00000464012 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
CCHCR1-210ENST00000464012 SBNO1A3KN83 1393 aa27.84■■■□□ 2.05
CCHCR1-210ENST00000464012 RBM6P78332 1123 aaKnown RBP27.83■■■□□ 2.05
CCHCR1-210ENST00000464012 L3MBTL2Q969R5 705 aa27.83■■■□□ 2.05
CCHCR1-210ENST00000464012 TRPM1Q7Z4N2 1603 aa27.82■■■□□ 2.04
CCHCR1-210ENST00000464012 QRICH2Q9H0J4 1663 aa27.82■■■□□ 2.04
CCHCR1-210ENST00000464012 HAP1P54257 671 aaPredicted RBP27.82■■■□□ 2.04
CCHCR1-210ENST00000464012 ATP7BP35670 1465 aa27.82■■■□□ 2.04
CCHCR1-210ENST00000464012 ALS2Q96Q42 1657 aa27.81■■■□□ 2.04
CCHCR1-210ENST00000464012 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.81■■■□□ 2.04
CCHCR1-210ENST00000464012 FNBP4Q8N3X1 1017 aaPredicted RBP27.81■■■□□ 2.04
CCHCR1-210ENST00000464012 TOPAZ1Q8N9V7 1692 aa27.81■■■□□ 2.04
CCHCR1-210ENST00000464012 TRPC5Q9UL62 973 aaPredicted RBP27.8■■■□□ 2.04
CCHCR1-210ENST00000464012 PLCH1Q4KWH8 1693 aa27.79■■■□□ 2.04
CCHCR1-210ENST00000464012 ATRNO75882 1429 aa27.79■■■□□ 2.04
CCHCR1-210ENST00000464012 ARHGEF10O15013 1369 aa27.79■■■□□ 2.04
CCHCR1-210ENST00000464012 GPRASP1Q5JY77 1395 aa27.79■■■□□ 2.04
CCHCR1-210ENST00000464012 CABLES1Q8TDN4 633 aa27.79■■■□□ 2.04
CCHCR1-210ENST00000464012 BCL9LQ86UU0 1499 aa27.77■■■□□ 2.04
CCHCR1-210ENST00000464012 NGDNQ8NEJ9 315 aaKnown RBP27.76■■■□□ 2.03
CCHCR1-210ENST00000464012 NUDT16Q96DE0 195 aaKnown RBP27.75■■■□□ 2.03
CCHCR1-210ENST00000464012 CDK19Q9BWU1 502 aa27.75■■■□□ 2.03
CCHCR1-210ENST00000464012 CRYBG1Q9Y4K1 1723 aa27.72■■■□□ 2.03
CCHCR1-210ENST00000464012 SLIT2O94813 1529 aa27.72■■■□□ 2.03
CCHCR1-210ENST00000464012 CENPJQ9HC77 1338 aaPredicted RBP27.72■■■□□ 2.03
CCHCR1-210ENST00000464012 NWD2Q9ULI1 1742 aa27.72■■■□□ 2.03
CCHCR1-210ENST00000464012 PAK3O75914 559 aaPredicted RBP27.71■■■□□ 2.03
CCHCR1-210ENST00000464012 UPF1Q92900 1129 aaKnown RBP eCLIP27.71■■■□□ 2.03
CCHCR1-210ENST00000464012 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
CCHCR1-210ENST00000464012 UNC5CLQ8IV45 518 aa27.67■■■□□ 2.02
CCHCR1-210ENST00000464012 ROCK2O75116 1388 aaKnown RBP27.67■■■□□ 2.02
CCHCR1-210ENST00000464012 GLI3P10071 1580 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms