RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 DLC1Q96QB1 1528 aa27.05■■□□□ 1.92
LMNB1-204ENST00000463908 PIP4K2BP78356 416 aa27.04■■□□□ 1.92
LMNB1-204ENST00000463908 ROCK2O75116 1388 aaKnown RBP27.03■■□□□ 1.92
LMNB1-204ENST00000463908 ADGRL3Q9HAR2 1447 aa27.02■■□□□ 1.92
LMNB1-204ENST00000463908 SAFB2Q14151 953 aaKnown RBP eCLIP27.02■■□□□ 1.92
LMNB1-204ENST00000463908 POGKQ9P215 609 aa27.02■■□□□ 1.92
LMNB1-204ENST00000463908 GPRASP1Q5JY77 1395 aa27.01■■□□□ 1.91
LMNB1-204ENST00000463908 SIPA1L2Q9P2F8 1722 aaPredicted RBP27■■□□□ 1.91
LMNB1-204ENST00000463908 ATF3P18847 181 aa26.99■■□□□ 1.91
LMNB1-204ENST00000463908 CADPS2Q86UW7 1296 aa26.99■■□□□ 1.91
LMNB1-204ENST00000463908 RALGAPBQ86X10 1494 aa26.99■■□□□ 1.91
LMNB1-204ENST00000463908 SLAIN2Q9P270 581 aa26.98■■□□□ 1.91
LMNB1-204ENST00000463908 NALCNQ8IZF0 1738 aa26.97■■□□□ 1.91
LMNB1-204ENST00000463908 CARD11Q9BXL7 1154 aa26.97■■□□□ 1.91
LMNB1-204ENST00000463908 DCCP43146 1447 aa26.95■■□□□ 1.9
LMNB1-204ENST00000463908 ARHGEF28Q8N1W1 1705 aaKnown RBP26.93■■□□□ 1.9
LMNB1-204ENST00000463908 MINK1Q8N4C8 1332 aaPredicted RBP26.92■■□□□ 1.9
LMNB1-204ENST00000463908 HIRIP3Q9BW71 556 aaPredicted RBP26.91■■□□□ 1.9
LMNB1-204ENST00000463908 MST1RQ04912 1400 aa26.9■■□□□ 1.9
LMNB1-204ENST00000463908 CENPJQ9HC77 1338 aaPredicted RBP26.9■■□□□ 1.9
LMNB1-204ENST00000463908 CDC42BPGQ6DT37 1551 aa26.85■■□□□ 1.89
LMNB1-204ENST00000463908 NUTM2FA1L443 756 aa26.85■■□□□ 1.89
LMNB1-204ENST00000463908 WASLO00401 505 aaPredicted RBP26.84■■□□□ 1.89
LMNB1-204ENST00000463908 C1orf167Q5SNV9 1468 aa26.84■■□□□ 1.89
LMNB1-204ENST00000463908 BRINP3Q76B58 766 aa26.83■■□□□ 1.89
LMNB1-204ENST00000463908 ORAI2Q96SN7 254 aa26.83■■□□□ 1.89
LMNB1-204ENST00000463908 ADGRB2O60241 1585 aa26.81■■□□□ 1.88
LMNB1-204ENST00000463908 CDK19Q9BWU1 502 aa26.81■■□□□ 1.88
LMNB1-204ENST00000463908 EIF3AQ14152 1382 aaKnown RBP26.8■■□□□ 1.88
LMNB1-204ENST00000463908 PHF23Q9BUL5 403 aaPredicted RBP26.79■■□□□ 1.88
LMNB1-204ENST00000463908 ST20-MTHFSA0A0A6YYL1 179 aa26.78■■□□□ 1.88
LMNB1-204ENST00000463908 ROBO1Q9Y6N7 1651 aa26.78■■□□□ 1.88
LMNB1-204ENST00000463908 FMN2Q9NZ56 1722 aa26.77■■□□□ 1.88
LMNB1-204ENST00000463908 PRR36Q9H6K5 1346 aa26.77■■□□□ 1.88
LMNB1-204ENST00000463908 ESCO1Q5FWF5 840 aa26.76■■□□□ 1.87
LMNB1-204ENST00000463908 QRICH2Q9H0J4 1663 aa26.76■■□□□ 1.87
LMNB1-204ENST00000463908 USP47Q96K76 1375 aa26.75■■□□□ 1.87
LMNB1-204ENST00000463908 TESK2Q96S53 571 aa26.75■■□□□ 1.87
LMNB1-204ENST00000463908 DDX17Q92841 729 aaKnown RBP26.73■■□□□ 1.87
LMNB1-204ENST00000463908 NUDT16Q96DE0 195 aaKnown RBP26.72■■□□□ 1.87
LMNB1-204ENST00000463908 CABP2Q9NPB3 220 aa26.72■■□□□ 1.87
LMNB1-204ENST00000463908 USP32Q8NFA0 1604 aa26.72■■□□□ 1.87
LMNB1-204ENST00000463908 SBNO2Q9Y2G9 1366 aa26.71■■□□□ 1.87
LMNB1-204ENST00000463908 ANKARQ7Z5J8 1434 aa26.71■■□□□ 1.87
LMNB1-204ENST00000463908 TULP4Q9NRJ4 1543 aa26.7■■□□□ 1.87
LMNB1-204ENST00000463908 EVC2Q86UK5 1308 aa26.69■■□□□ 1.86
LMNB1-204ENST00000463908 SRPK2P78362 688 aaKnown RBP26.68■■□□□ 1.86
LMNB1-204ENST00000463908 PHF8Q9UPP1 1060 aa26.68■■□□□ 1.86
LMNB1-204ENST00000463908 RGPD8O14715 1765 aaPredicted RBP26.68■■□□□ 1.86
LMNB1-204ENST00000463908 FOXO3O43524 673 aa26.67■■□□□ 1.86
LMNB1-204ENST00000463908 PMFBP1Q8TBY8 1022 aa26.66■■□□□ 1.86
LMNB1-204ENST00000463908 CCDC61Q9Y6R9 512 aa26.65■■□□□ 1.86
LMNB1-204ENST00000463908 ATP7BP35670 1465 aa26.65■■□□□ 1.86
LMNB1-204ENST00000463908 HSPA5P11021 654 aaKnown RBP26.64■■□□□ 1.86
LMNB1-204ENST00000463908 EIF4G2P78344 907 aaKnown RBP eCLIP26.64■■□□□ 1.865e-6■■□□□ 14.3
LMNB1-204ENST00000463908 AHDC1Q5TGY3 1603 aaPredicted RBP26.63■■□□□ 1.85
LMNB1-204ENST00000463908 SOS2Q07890 1332 aaPredicted RBP26.62■■□□□ 1.85
LMNB1-204ENST00000463908 PLEKHG3A1L390 1219 aa26.61■■□□□ 1.85
LMNB1-204ENST00000463908 XPCQ01831 940 aaPredicted RBP26.6■■□□□ 1.85
LMNB1-204ENST00000463908 NHSL1Q5SYE7 1610 aa26.6■■□□□ 1.85
LMNB1-204ENST00000463908 SLC24A1O60721 1099 aa26.59■■□□□ 1.85
LMNB1-204ENST00000463908 CABP1Q9NZU7 370 aa26.59■■□□□ 1.85
LMNB1-204ENST00000463908 NPHP3Q7Z494 1330 aa26.59■■□□□ 1.85
LMNB1-204ENST00000463908 PHLPP1O60346 1717 aa26.59■■□□□ 1.85
LMNB1-204ENST00000463908 COL16A1Q07092 1604 aaPredicted RBP26.57■■□□□ 1.84
LMNB1-204ENST00000463908 KRT28Q7Z3Y7 464 aa26.57■■□□□ 1.84
LMNB1-204ENST00000463908 PUS7Q96PZ0 661 aaKnown RBP26.57■■□□□ 1.84
LMNB1-204ENST00000463908 TMF1P82094 1093 aa26.56■■□□□ 1.84
LMNB1-204ENST00000463908 RGS17Q9UGC6 210 aaPredicted RBP26.56■■□□□ 1.84
LMNB1-204ENST00000463908 PXDNQ92626 1479 aa26.55■■□□□ 1.84
LMNB1-204ENST00000463908 KIF1AQ12756 1690 aa26.55■■□□□ 1.84
LMNB1-204ENST00000463908 PSME1Q06323 249 aa26.55■■□□□ 1.84
LMNB1-204ENST00000463908 NGDNQ8NEJ9 315 aaKnown RBP26.55■■□□□ 1.84
LMNB1-204ENST00000463908 LRRC59Q96AG4 307 aaKnown RBP26.55■■□□□ 1.84
LMNB1-204ENST00000463908 PPIP5K1Q6PFW1 1433 aa26.55■■□□□ 1.84
LMNB1-204ENST00000463908 ACEP12821 1306 aa26.54■■□□□ 1.84
LMNB1-204ENST00000463908 TOPAZ1Q8N9V7 1692 aa26.54■■□□□ 1.84
LMNB1-204ENST00000463908 POLR3AO14802 1390 aaPredicted RBP26.53■■□□□ 1.84
LMNB1-204ENST00000463908 ATAD2Q6PL18 1390 aa26.52■■□□□ 1.84
LMNB1-204ENST00000463908 ITSN1Q15811 1721 aa26.5■■□□□ 1.83
LMNB1-204ENST00000463908 C11orf95C9JLR9 678 aaPredicted RBP26.49■■□□□ 1.83
LMNB1-204ENST00000463908 SLC12A5Q9H2X9 1139 aa26.49■■□□□ 1.83
LMNB1-204ENST00000463908 JCADQ9P266 1359 aa26.48■■□□□ 1.83
LMNB1-204ENST00000463908 SPATA31A3Q5VYP0 1347 aa26.47■■□□□ 1.83
LMNB1-204ENST00000463908 ZEB1P37275 1124 aaPredicted RBP26.47■■□□□ 1.83
LMNB1-204ENST00000463908 TMC1Q8TDI8 760 aa26.46■■□□□ 1.83
LMNB1-204ENST00000463908 SBNO1A3KN83 1393 aa26.45■■□□□ 1.82
LMNB1-204ENST00000463908 CDCA8Q53HL2 280 aa26.44■■□□□ 1.82
LMNB1-204ENST00000463908 PNPLA6Q8IY17 1366 aa26.44■■□□□ 1.82
LMNB1-204ENST00000463908 CPSF1Q10570 1443 aaKnown RBP26.42■■□□□ 1.82
LMNB1-204ENST00000463908 ZNF692Q9BU19 519 aaPredicted RBP26.42■■□□□ 1.82
LMNB1-204ENST00000463908 CD163L1Q9NR16 1453 aa26.42■■□□□ 1.82
LMNB1-204ENST00000463908 TRPM3Q9HCF6 1732 aaPredicted RBP26.39■■□□□ 1.82
LMNB1-204ENST00000463908 PAK3O75914 559 aaPredicted RBP26.39■■□□□ 1.82
LMNB1-204ENST00000463908 TNS3Q68CZ2 1445 aa26.39■■□□□ 1.81
LMNB1-204ENST00000463908 SSH2Q76I76 1423 aa26.39■■□□□ 1.81
LMNB1-204ENST00000463908 POTEAQ6S8J7 498 aa26.38■■□□□ 1.81
LMNB1-204ENST00000463908 USP6P35125 1406 aa26.38■■□□□ 1.81
LMNB1-204ENST00000463908 LMOD2Q6P5Q4 547 aa26.37■■□□□ 1.81
LMNB1-204ENST00000463908 SHPRHQ149N8 1683 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms