RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.125e-6■■■□□ 19.1
PDCD4-204ENST00000462577 ZSWIM6Q9HCJ5 1215 aa8.03□□□□□ -1.12
PDCD4-204ENST00000462577 ZNF777Q9ULD5 760 aaPredicted RBP8.03□□□□□ -1.12
PDCD4-204ENST00000462577 CAMSAP1Q5T5Y3 1602 aa8.03□□□□□ -1.12
PDCD4-204ENST00000462577 PRDM15P57071 1507 aaPredicted RBP8.03□□□□□ -1.12
PDCD4-204ENST00000462577 SPAG9O60271 1321 aaKnown RBP8.03□□□□□ -1.12
PDCD4-204ENST00000462577 ZNF142P52746 1687 aaPredicted RBP8.02□□□□□ -1.13
PDCD4-204ENST00000462577 LARP6Q9BRS8 491 aaKnown RBP8.02□□□□□ -1.13
PDCD4-204ENST00000462577 FAM205CA6NFA0 338 aa8.01□□□□□ -1.13
PDCD4-204ENST00000462577 SLC34A2O95436 690 aa8.01□□□□□ -1.13
PDCD4-204ENST00000462577 KDM5DQ9BY66 1539 aa8□□□□□ -1.13
PDCD4-204ENST00000462577 CFAP65Q6ZU64 1925 aaKnown RBP8□□□□□ -1.13
PDCD4-204ENST00000462577 POTEB3A0JP26 581 aa8□□□□□ -1.13
PDCD4-204ENST00000462577 PPP1R15BQ5SWA1 713 aa8□□□□□ -1.13
PDCD4-204ENST00000462577 POTEBQ6S5H4 581 aa8□□□□□ -1.13
PDCD4-204ENST00000462577 PCDHGA4Q9Y5G9 962 aa8□□□□□ -1.13
PDCD4-204ENST00000462577 ERBINQ96RT1 1412 aa8□□□□□ -1.13
PDCD4-204ENST00000462577 VWDEQ8N2E2 1590 aa8□□□□□ -1.13
PDCD4-204ENST00000462577 PTPRMP28827 1452 aa8□□□□□ -1.13
PDCD4-204ENST00000462577 IQGAP3Q86VI3 1631 aa8□□□□□ -1.13
PDCD4-204ENST00000462577 TET3O43151 1660 aa7.99□□□□□ -1.13
PDCD4-204ENST00000462577 CDAN1Q8IWY9 1227 aa7.99□□□□□ -1.13
PDCD4-204ENST00000462577 HS3ST6Q96QI5 342 aa7.99□□□□□ -1.13
PDCD4-204ENST00000462577 MYO3AQ8NEV4 1616 aa7.99□□□□□ -1.13
PDCD4-204ENST00000462577 KDM5AP29375 1690 aaKnown RBP7.98□□□□□ -1.13
PDCD4-204ENST00000462577 DHX29Q7Z478 1369 aaKnown RBP7.98□□□□□ -1.13
PDCD4-204ENST00000462577 CNTLNQ9NXG0 1405 aa7.98□□□□□ -1.13
PDCD4-204ENST00000462577 KDM4FA0A1W2PPD8 638 aa7.98□□□□□ -1.13
PDCD4-204ENST00000462577 ERBB3P21860 1342 aa7.98□□□□□ -1.13
PDCD4-204ENST00000462577 ROCK1Q13464 1354 aa7.97□□□□□ -1.13
PDCD4-204ENST00000462577 NCOA1Q15788 1441 aa7.97□□□□□ -1.13
PDCD4-204ENST00000462577 NUDT7P0C024 238 aa7.97□□□□□ -1.13
PDCD4-204ENST00000462577 TSPY4P0CV99 314 aa7.97□□□□□ -1.13
PDCD4-204ENST00000462577 TSPY10P0CW01 314 aa7.97□□□□□ -1.13
PDCD4-204ENST00000462577 DDX27Q96GQ7 796 aaKnown RBP7.97□□□□□ -1.13
PDCD4-204ENST00000462577 ABCC3O15438 1527 aa7.97□□□□□ -1.13
PDCD4-204ENST00000462577 ANKRD30AQ9BXX3 1397 aa7.97□□□□□ -1.13
PDCD4-204ENST00000462577 PTPRKQ15262 1439 aa7.96□□□□□ -1.13
PDCD4-204ENST00000462577 E9PCH4 1651 aa7.96□□□□□ -1.13
PDCD4-204ENST00000462577 POLR1AO95602 1720 aaPredicted RBP7.96□□□□□ -1.14
PDCD4-204ENST00000462577 MFSD10Q14728 455 aa7.96□□□□□ -1.14
PDCD4-204ENST00000462577 PTCD2Q8WV60 388 aaKnown RBP7.96□□□□□ -1.14
PDCD4-204ENST00000462577 LMTK2Q8IWU2 1503 aa7.96□□□□□ -1.14
PDCD4-204ENST00000462577 KIF15Q9NS87 1388 aa7.96□□□□□ -1.14
PDCD4-204ENST00000462577 SPHKAPQ2M3C7 1700 aa7.95□□□□□ -1.14
PDCD4-204ENST00000462577 MYO5BQ9ULV0 1848 aa7.95□□□□□ -1.14
PDCD4-204ENST00000462577 UPF1Q92900 1129 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDCD4-204ENST00000462577 EFCAB6Q5THR3 1501 aa7.94□□□□□ -1.14
PDCD4-204ENST00000462577 SPATA31D1Q6ZQQ2 1576 aa7.94□□□□□ -1.14
PDCD4-204ENST00000462577 VARS2Q5ST30 1063 aaKnown RBP7.94□□□□□ -1.14
PDCD4-204ENST00000462577 MYT1LQ9UL68 1186 aa7.94□□□□□ -1.14
PDCD4-204ENST00000462577 UBR1Q8IWV7 1749 aa7.93□□□□□ -1.14
PDCD4-204ENST00000462577 STRCQ7RTU9 1775 aa7.93□□□□□ -1.14
PDCD4-204ENST00000462577 ARID4BQ4LE39 1312 aaPredicted RBP7.93□□□□□ -1.14
PDCD4-204ENST00000462577 NPATQ14207 1427 aa7.93□□□□□ -1.14
PDCD4-204ENST00000462577 PZPP20742 1482 aa7.93□□□□□ -1.14
PDCD4-204ENST00000462577 PIK3C2BO00750 1634 aa7.92□□□□□ -1.14
PDCD4-204ENST00000462577 ZNF316A6NFI3 1004 aaPredicted RBP7.92□□□□□ -1.14
PDCD4-204ENST00000462577 TBC1D12O60347 775 aa7.92□□□□□ -1.14
PDCD4-204ENST00000462577 OXER1Q8TDS5 423 aa7.92□□□□□ -1.14
PDCD4-204ENST00000462577 LHX6Q9UPM6 363 aa7.92□□□□□ -1.14
PDCD4-204ENST00000462577 ANKRD50Q9ULJ7 1429 aa7.92□□□□□ -1.14
PDCD4-204ENST00000462577 FAM50AQ14320 339 aaKnown RBP7.91□□□□□ -1.14
PDCD4-204ENST00000462577 TSHZ2Q9NRE2 1034 aa7.91□□□□□ -1.14
PDCD4-204ENST00000462577 CEP170BQ9Y4F5 1589 aaPredicted RBP7.91□□□□□ -1.14
PDCD4-204ENST00000462577 KIF1BO60333 1816 aa7.91□□□□□ -1.14
PDCD4-204ENST00000462577 RPRD2Q5VT52 1461 aaKnown RBP7.9□□□□□ -1.14
PDCD4-204ENST00000462577 LMTK3Q96Q04 1460 aa7.9□□□□□ -1.14
PDCD4-204ENST00000462577 HFM1A2PYH4 1435 aa7.9□□□□□ -1.14
PDCD4-204ENST00000462577 ARHGAP31Q2M1Z3 1444 aa7.9□□□□□ -1.14
PDCD4-204ENST00000462577 PPARGC1BQ86YN6 1023 aaKnown RBP7.9□□□□□ -1.14
PDCD4-204ENST00000462577 EMILIN3Q9NT22 766 aa7.9□□□□□ -1.14
PDCD4-204ENST00000462577 SYNMO15061 1565 aa7.89□□□□□ -1.15
PDCD4-204ENST00000462577 NAIPQ13075 1403 aa7.89□□□□□ -1.15
PDCD4-204ENST00000462577 KIF3BO15066 747 aa7.88□□□□□ -1.15
PDCD4-204ENST00000462577 ERVK-7P63135 1459 aa7.87□□□□□ -1.15
PDCD4-204ENST00000462577 ZMYM3Q14202 1370 aa7.87□□□□□ -1.15
PDCD4-204ENST00000462577 MLECQ14165 292 aa7.87□□□□□ -1.15
PDCD4-204ENST00000462577 ZNF687Q8N1G0 1237 aa7.87□□□□□ -1.15
PDCD4-204ENST00000462577 KRTAP3-3Q9BYR6 98 aa7.87□□□□□ -1.15
PDCD4-204ENST00000462577 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
PDCD4-204ENST00000462577 RRP7BPQ9NSQ0 103 aa7.87□□□□□ -1.15
PDCD4-204ENST00000462577 NLRP1Q9C000 1473 aa7.87□□□□□ -1.15
PDCD4-204ENST00000462577 IFT172Q9UG01 1749 aa7.86□□□□□ -1.15
PDCD4-204ENST00000462577 KANK1Q14678 1352 aa7.86□□□□□ -1.15
PDCD4-204ENST00000462577 MAP3K9P80192 1104 aa7.86□□□□□ -1.15
PDCD4-204ENST00000462577 PLCB2Q00722 1185 aa7.86□□□□□ -1.15
PDCD4-204ENST00000462577 CAMK2BQ13554 666 aa7.86□□□□□ -1.15
PDCD4-204ENST00000462577 CHIC2Q9UKJ5 165 aa7.86□□□□□ -1.15
PDCD4-204ENST00000462577 TMEM131LA2VDJ0 1609 aa7.85□□□□□ -1.15
PDCD4-204ENST00000462577 GGT6Q6P531 493 aa7.85□□□□□ -1.15
PDCD4-204ENST00000462577 ESF1Q9H501 851 aaKnown RBP7.85□□□□□ -1.15
PDCD4-204ENST00000462577 A2ML1A8K2U0 1454 aa7.85□□□□□ -1.15
PDCD4-204ENST00000462577 UHRF1BP1Q6BDS2 1440 aa7.85□□□□□ -1.15
PDCD4-204ENST00000462577 ADGRB3O60242 1522 aa7.84□□□□□ -1.15
PDCD4-204ENST00000462577 PLA2R1Q13018 1463 aa7.84□□□□□ -1.15
PDCD4-204ENST00000462577 EVI5O60447 810 aa7.84□□□□□ -1.15
PDCD4-204ENST00000462577 WDR70Q9NW82 654 aa7.84□□□□□ -1.15
PDCD4-204ENST00000462577 NOS1P29475 1434 aa7.84□□□□□ -1.15
PDCD4-204ENST00000462577 PPLO60437 1756 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms