RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 C14orf37Q86TY3 774 aa9.38□□□□□ -0.91
SMARCC1-204ENST00000462198 TIAM1Q13009 1591 aa9.37□□□□□ -0.91
SMARCC1-204ENST00000462198 ABCC3O15438 1527 aa9.37□□□□□ -0.91
SMARCC1-204ENST00000462198 TET3O43151 1660 aa9.37□□□□□ -0.91
SMARCC1-204ENST00000462198 TSPY4P0CV99 314 aa9.37□□□□□ -0.91
SMARCC1-204ENST00000462198 TSPY10P0CW01 314 aa9.37□□□□□ -0.91
SMARCC1-204ENST00000462198 TSPYL2Q9H2G4 693 aaPredicted RBP9.37□□□□□ -0.91
SMARCC1-204ENST00000462198 ATF3P18847 181 aa9.36□□□□□ -0.91
SMARCC1-204ENST00000462198 CADPS2Q86UW7 1296 aa9.36□□□□□ -0.91
SMARCC1-204ENST00000462198 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
SMARCC1-204ENST00000462198 NKTRP30414 1462 aaKnown RBP9.35□□□□□ -0.91
SMARCC1-204ENST00000462198 AHDC1Q5TGY3 1603 aaPredicted RBP9.35□□□□□ -0.91
SMARCC1-204ENST00000462198 IDI1Q13907 227 aa9.35□□□□□ -0.91
SMARCC1-204ENST00000462198 TPRNQ4KMQ1 711 aa9.35□□□□□ -0.91
SMARCC1-204ENST00000462198 LRRC59Q96AG4 307 aaKnown RBP9.35□□□□□ -0.91
SMARCC1-204ENST00000462198 C19orf44Q9H6X5 657 aa9.35□□□□□ -0.91
SMARCC1-204ENST00000462198 TRPC6Q9Y210 931 aa9.35□□□□□ -0.91
SMARCC1-204ENST00000462198 COLQQ9Y215 455 aaPredicted RBP9.35□□□□□ -0.91
SMARCC1-204ENST00000462198 BRINP3Q76B58 766 aa9.34□□□□□ -0.91
SMARCC1-204ENST00000462198 KDM5AP29375 1690 aaKnown RBP9.34□□□□□ -0.91
SMARCC1-204ENST00000462198 CHD2O14647 1828 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-204ENST00000462198 ADAMTS2O95450 1211 aa9.33□□□□□ -0.92
SMARCC1-204ENST00000462198 MMRN1Q13201 1228 aa9.33□□□□□ -0.92
SMARCC1-204ENST00000462198 PIK3C2BO00750 1634 aa9.33□□□□□ -0.92
SMARCC1-204ENST00000462198 MTUS2Q5JR59 1369 aa9.33□□□□□ -0.92
SMARCC1-204ENST00000462198 CEP152O94986 1710 aa9.33□□□□□ -0.92
SMARCC1-204ENST00000462198 CCDC141Q6ZP82 1450 aa9.33□□□□□ -0.92
SMARCC1-204ENST00000462198 DIP2AQ14689 1571 aa9.33□□□□□ -0.92
SMARCC1-204ENST00000462198 NWD1Q149M9 1564 aa9.33□□□□□ -0.92
SMARCC1-204ENST00000462198 CEP162Q5TB80 1403 aa9.32□□□□□ -0.92
SMARCC1-204ENST00000462198 ST18O60284 1047 aa9.32□□□□□ -0.92
SMARCC1-204ENST00000462198 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.32□□□□□ -0.92
SMARCC1-204ENST00000462198 USP21Q9UK80 565 aa9.32□□□□□ -0.92
SMARCC1-204ENST00000462198 TRPC5Q9UL62 973 aaPredicted RBP9.32□□□□□ -0.92
SMARCC1-204ENST00000462198 NCOA3Q9Y6Q9 1424 aa9.31□□□□□ -0.92
SMARCC1-204ENST00000462198 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.31□□□□□ -0.92
SMARCC1-204ENST00000462198 SEC24BO95487 1268 aa9.31□□□□□ -0.92
SMARCC1-204ENST00000462198 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
SMARCC1-204ENST00000462198 FYCO1Q9BQS8 1478 aa9.31□□□□□ -0.92
SMARCC1-204ENST00000462198 EP400Q96L91 3159 aa9.3□□□□□ -0.92
SMARCC1-204ENST00000462198 TTLL13PA6NNM8 815 aa9.3□□□□□ -0.92
SMARCC1-204ENST00000462198 YY1P25490 414 aa9.3□□□□□ -0.92
SMARCC1-204ENST00000462198 IER5LQ5T953 404 aa9.3□□□□□ -0.92
SMARCC1-204ENST00000462198 DEFB132Q7Z7B7 95 aa9.3□□□□□ -0.92
SMARCC1-204ENST00000462198 EFCAB6Q5THR3 1501 aa9.3□□□□□ -0.92
SMARCC1-204ENST00000462198 SETD5Q9C0A6 1442 aa9.3□□□□□ -0.92
SMARCC1-204ENST00000462198 CAMSAP2Q08AD1 1489 aa9.29□□□□□ -0.92
SMARCC1-204ENST00000462198 SPNS2Q8IVW8 549 aa9.29□□□□□ -0.92
SMARCC1-204ENST00000462198 TBX22Q9Y458 520 aa9.29□□□□□ -0.92
SMARCC1-204ENST00000462198 LRP5O75197 1615 aa9.29□□□□□ -0.92
SMARCC1-204ENST00000462198 ARHGAP31Q2M1Z3 1444 aa9.29□□□□□ -0.92
SMARCC1-204ENST00000462198 MAP3K13O43283 966 aa9.28□□□□□ -0.92
SMARCC1-204ENST00000462198 DDX17Q92841 729 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-204ENST00000462198 MROH1Q8NDA8 1641 aa9.27□□□□□ -0.92
SMARCC1-204ENST00000462198 PSDA5PKW4 1024 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-204ENST00000462198 HRCP23327 699 aa9.27□□□□□ -0.93
SMARCC1-204ENST00000462198 HDGFP51858 240 aaKnown RBP9.27□□□□□ -0.93
SMARCC1-204ENST00000462198 FNBP4Q8N3X1 1017 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-204ENST00000462198 MAST1Q9Y2H9 1570 aa9.27□□□□□ -0.93
SMARCC1-204ENST00000462198 PNPLA6Q8IY17 1366 aa9.26□□□□□ -0.93
SMARCC1-204ENST00000462198 PPP1R15AO75807 674 aaPredicted RBP9.26□□□□□ -0.93
SMARCC1-204ENST00000462198 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
SMARCC1-204ENST00000462198 PAXIP1Q6ZW49 1069 aaPredicted RBP9.26□□□□□ -0.93
SMARCC1-204ENST00000462198 SLAIN1Q8ND83 568 aa9.26□□□□□ -0.93
SMARCC1-204ENST00000462198 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
SMARCC1-204ENST00000462198 EIF2AK4Q9P2K8 1649 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-204ENST00000462198 SPOCK2Q92563 424 aa9.25□□□□□ -0.93
SMARCC1-204ENST00000462198 PLEKHG1Q9ULL1 1385 aa9.24□□□□□ -0.93
SMARCC1-204ENST00000462198 ATRNO75882 1429 aa9.24□□□□□ -0.93
SMARCC1-204ENST00000462198 AMOTL2Q9Y2J4 779 aa9.24□□□□□ -0.93
SMARCC1-204ENST00000462198 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
SMARCC1-204ENST00000462198 ASXL1Q8IXJ9 1541 aa9.23□□□□□ -0.93
SMARCC1-204ENST00000462198 ECM2O94769 699 aaPredicted RBP9.23□□□□□ -0.93
SMARCC1-204ENST00000462198 GJD4Q96KN9 370 aaPredicted RBP9.23□□□□□ -0.93
SMARCC1-204ENST00000462198 TMEM121BQ9BXQ6 578 aaPredicted RBP9.23□□□□□ -0.93
SMARCC1-204ENST00000462198 SLC52A1Q9NWF4 448 aa9.23□□□□□ -0.93
SMARCC1-204ENST00000462198 NHSL1Q5SYE7 1610 aa9.23□□□□□ -0.93
SMARCC1-204ENST00000462198 TRIM35Q9UPQ4 493 aa9.22□□□□□ -0.93
SMARCC1-204ENST00000462198 CFAP44Q96MT7 982 aa9.21□□□□□ -0.94
SMARCC1-204ENST00000462198 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMARCC1-204ENST00000462198 RRP7BPQ9NSQ0 103 aa9.2□□□□□ -0.94
SMARCC1-204ENST00000462198 KANK1Q14678 1352 aa9.2□□□□□ -0.94
SMARCC1-204ENST00000462198 MST1RQ04912 1400 aa9.2□□□□□ -0.94
SMARCC1-204ENST00000462198 VPS8Q8N3P4 1428 aa9.2□□□□□ -0.94
SMARCC1-204ENST00000462198 RIMS2Q9UQ26 1411 aa9.2□□□□□ -0.94
SMARCC1-204ENST00000462198 MYO5BQ9ULV0 1848 aa9.19□□□□□ -0.94
SMARCC1-204ENST00000462198 SGIP1Q9BQI5 828 aa9.19□□□□□ -0.94
SMARCC1-204ENST00000462198 PIK3R4Q99570 1358 aa9.19□□□□□ -0.94
SMARCC1-204ENST00000462198 ZFYVE9O95405 1425 aa9.19□□□□□ -0.94
SMARCC1-204ENST00000462198 PTCH1Q13635 1447 aa9.19□□□□□ -0.94
SMARCC1-204ENST00000462198 BCL9LQ86UU0 1499 aa9.19□□□□□ -0.94
SMARCC1-204ENST00000462198 ADGRB3O60242 1522 aa9.19□□□□□ -0.94
SMARCC1-204ENST00000462198 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
SMARCC1-204ENST00000462198 DUOX2Q9NRD8 1548 aa9.19□□□□□ -0.94
SMARCC1-204ENST00000462198 DCCP43146 1447 aa9.18□□□□□ -0.94
SMARCC1-204ENST00000462198 ADAMTS13Q76LX8 1427 aa9.18□□□□□ -0.94
SMARCC1-204ENST00000462198 BRWD3Q6RI45 1802 aa9.17□□□□□ -0.94
SMARCC1-204ENST00000462198 NOS1P29475 1434 aa9.17□□□□□ -0.94
SMARCC1-204ENST00000462198 RGL2O15211 777 aa9.17□□□□□ -0.94
SMARCC1-204ENST00000462198 CHGAP10645 457 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms