RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	SOS2	Q07890	1332 aa	Predicted RBP	18.72	■□□□□ 0.59
FDPS-204	ENST00000461507	MEX3C	Q5U5Q3	659 aa	Known RBP	18.69	■□□□□ 0.58
FDPS-204	ENST00000461507	ZNF772	Q68DY9	489 aa	Predicted RBP	18.69	■□□□□ 0.58
FDPS-204	ENST00000461507	DDX17	Q92841	729 aa	Known RBP	18.69	■□□□□ 0.58
FDPS-204	ENST00000461507	PXDN	Q92626	1479 aa		18.69	■□□□□ 0.58
FDPS-204	ENST00000461507	ORAI2	Q96SN7	254 aa		18.68	■□□□□ 0.58
FDPS-204	ENST00000461507	C14orf93	Q9H972	538 aa	Known RBP	18.68	■□□□□ 0.58
FDPS-204	ENST00000461507	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.68	■□□□□ 0.58
FDPS-204	ENST00000461507	KIF1A	Q12756	1690 aa		18.68	■□□□□ 0.58
FDPS-204	ENST00000461507	DLC1	Q96QB1	1528 aa		18.68	■□□□□ 0.58
FDPS-204	ENST00000461507	PLEKHH1	Q9ULM0	1364 aa		18.68	■□□□□ 0.58
FDPS-204	ENST00000461507	HRC	P23327	699 aa		18.67	■□□□□ 0.58
FDPS-204	ENST00000461507	SIRT1	Q96EB6	747 aa		18.67	■□□□□ 0.58
FDPS-204	ENST00000461507	ADGRB1	O14514	1584 aa		18.67	■□□□□ 0.58
FDPS-204	ENST00000461507	TMEM132E	Q6IEE7	984 aa		18.65	■□□□□ 0.58
FDPS-204	ENST00000461507	ADGRB2	O60241	1585 aa		18.64	■□□□□ 0.58
FDPS-204	ENST00000461507	WAPL	Q7Z5K2	1190 aa		18.64	■□□□□ 0.57
FDPS-204	ENST00000461507	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.63	■□□□□ 0.57
FDPS-204	ENST00000461507	NUTM2E	B1AL46	878 aa	Predicted RBP	18.63	■□□□□ 0.57
FDPS-204	ENST00000461507	TRIM26	Q12899	539 aa	Predicted RBP	18.63	■□□□□ 0.57
FDPS-204	ENST00000461507	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.63	■□□□□ 0.57
FDPS-204	ENST00000461507	STK26	Q9P289	416 aa		18.63	■□□□□ 0.57
FDPS-204	ENST00000461507	NPHP3	Q7Z494	1330 aa		18.63	■□□□□ 0.57
FDPS-204	ENST00000461507	MARF1	Q9Y4F3	1742 aa	Known RBP	18.63	■□□□□ 0.57
FDPS-204	ENST00000461507	AFF2	P51816	1311 aa		18.62	■□□□□ 0.57
FDPS-204	ENST00000461507	DHX57	Q6P158	1386 aa	Known RBP	18.62	■□□□□ 0.57
FDPS-204	ENST00000461507	RGPD8	O14715	1765 aa	Predicted RBP	18.6	■□□□□ 0.57
FDPS-204	ENST00000461507	CFAP70	Q5T0N1	1121 aa		18.6	■□□□□ 0.57
FDPS-204	ENST00000461507	ESCO1	Q5FWF5	840 aa		18.59	■□□□□ 0.57
FDPS-204	ENST00000461507	USP32	Q8NFA0	1604 aa		18.58	■□□□□ 0.56
FDPS-204	ENST00000461507	RXRB	P28702	533 aa		18.56	■□□□□ 0.56
FDPS-204	ENST00000461507	STAC3	Q96MF2	364 aa		18.56	■□□□□ 0.56
FDPS-204	ENST00000461507	ANKAR	Q7Z5J8	1434 aa		18.56	■□□□□ 0.56
FDPS-204	ENST00000461507	C8orf37	Q96NL8	207 aa		18.55	■□□□□ 0.56
FDPS-204	ENST00000461507	RGS12	O14924	1447 aa		18.55	■□□□□ 0.56
FDPS-204	ENST00000461507	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.54	■□□□□ 0.56
FDPS-204	ENST00000461507	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.54	■□□□□ 0.56
FDPS-204	ENST00000461507	FOXO3	O43524	673 aa		18.54	■□□□□ 0.56
FDPS-204	ENST00000461507	KIAA1210	Q9ULL0	1709 aa		18.53	■□□□□ 0.56
FDPS-204	ENST00000461507	ABCA3	Q99758	1704 aa		18.52	■□□□□ 0.56
FDPS-204	ENST00000461507	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.52	■□□□□ 0.56
FDPS-204	ENST00000461507	PRAM1	Q96QH2	718 aa		18.52	■□□□□ 0.56
FDPS-204	ENST00000461507	ATRN	O75882	1429 aa		18.51	■□□□□ 0.55
FDPS-204	ENST00000461507	NUTM2F	A1L443	756 aa		18.51	■□□□□ 0.55
FDPS-204	ENST00000461507	ADAMTS2	O95450	1211 aa		18.51	■□□□□ 0.55
FDPS-204	ENST00000461507	RBM6	P78332	1123 aa	Known RBP	18.51	■□□□□ 0.55
FDPS-204	ENST00000461507	SPATA31A3	Q5VYP0	1347 aa		18.5	■□□□□ 0.55
FDPS-204	ENST00000461507	TNS3	Q68CZ2	1445 aa		18.5	■□□□□ 0.55
FDPS-204	ENST00000461507	TRPM3	Q9HCF6	1732 aa	Predicted RBP	18.5	■□□□□ 0.55
FDPS-204	ENST00000461507	NGLY1	Q96IV0	654 aa		18.5	■□□□□ 0.55
FDPS-204	ENST00000461507	TULP4	Q9NRJ4	1543 aa		18.49	■□□□□ 0.55
FDPS-204	ENST00000461507	XPC	Q01831	940 aa	Predicted RBP	18.49	■□□□□ 0.55
FDPS-204	ENST00000461507	DCAF11	Q8TEB1	546 aa		18.49	■□□□□ 0.55
FDPS-204	ENST00000461507	QTRT2	Q9H974	415 aa	Known RBP	18.49	■□□□□ 0.55
FDPS-204	ENST00000461507	BCL9L	Q86UU0	1499 aa		18.48	■□□□□ 0.55
FDPS-204	ENST00000461507	SBNO1	A3KN83	1393 aa		18.48	■□□□□ 0.55
FDPS-204	ENST00000461507	EIF3A	Q14152	1382 aa	Known RBP	18.48	■□□□□ 0.55
FDPS-204	ENST00000461507	PHF8	Q9UPP1	1060 aa		18.48	■□□□□ 0.55
FDPS-204	ENST00000461507	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.47	■□□□□ 0.55
FDPS-204	ENST00000461507	ITSN1	Q15811	1721 aa		18.46	■□□□□ 0.55
FDPS-204	ENST00000461507	SLIT2	O94813	1529 aa		18.46	■□□□□ 0.55
FDPS-204	ENST00000461507	USP21	Q9UK80	565 aa		18.46	■□□□□ 0.55
FDPS-204	ENST00000461507	ALS2	Q96Q42	1657 aa		18.46	■□□□□ 0.55
FDPS-204	ENST00000461507	KRT28	Q7Z3Y7	464 aa		18.45	■□□□□ 0.54
FDPS-204	ENST00000461507	POGK	Q9P215	609 aa		18.45	■□□□□ 0.54
FDPS-204	ENST00000461507	TRPC5	Q9UL62	973 aa	Predicted RBP	18.45	■□□□□ 0.54
FDPS-204	ENST00000461507	NWD2	Q9ULI1	1742 aa		18.44	■□□□□ 0.54
FDPS-204	ENST00000461507	SAFB2	Q14151	953 aa	Known RBP eCLIP	18.44	■□□□□ 0.54
FDPS-204	ENST00000461507	KDM2A	Q9Y2K7	1162 aa		18.44	■□□□□ 0.54
FDPS-204	ENST00000461507	PLCH1	Q4KWH8	1693 aa		18.44	■□□□□ 0.54
FDPS-204	ENST00000461507	PCGF6	Q9BYE7	350 aa		18.43	■□□□□ 0.54
FDPS-204	ENST00000461507	TRAK1	Q9UPV9	953 aa		18.43	■□□□□ 0.54
FDPS-204	ENST00000461507	CRYBG1	Q9Y4K1	1723 aa		18.43	■□□□□ 0.54
FDPS-204	ENST00000461507	ARHGEF10	O15013	1369 aa		18.42	■□□□□ 0.54
FDPS-204	ENST00000461507	TOPAZ1	Q8N9V7	1692 aa		18.42	■□□□□ 0.54
FDPS-204	ENST00000461507	ATP7B	P35670	1465 aa		18.42	■□□□□ 0.54
FDPS-204	ENST00000461507	PRR36	Q9H6K5	1346 aa		18.42	■□□□□ 0.54
FDPS-204	ENST00000461507	PSME1	Q06323	249 aa		18.41	■□□□□ 0.54
FDPS-204	ENST00000461507	GLI3	P10071	1580 aa		18.41	■□□□□ 0.54
FDPS-204	ENST00000461507	WASL	O00401	505 aa	Predicted RBP	18.39	■□□□□ 0.53
FDPS-204	ENST00000461507	MINK1	Q8N4C8	1332 aa	Predicted RBP	18.39	■□□□□ 0.53
FDPS-204	ENST00000461507	HIRIP3	Q9BW71	556 aa	Predicted RBP	18.38	■□□□□ 0.53
FDPS-204	ENST00000461507	NRAP	Q86VF7	1730 aa		18.37	■□□□□ 0.53
FDPS-204	ENST00000461507	NEUROD1	Q13562	356 aa		18.37	■□□□□ 0.53
FDPS-204	ENST00000461507	ATAD2	Q6PL18	1390 aa		18.37	■□□□□ 0.53
FDPS-204	ENST00000461507	RALGAPB	Q86X10	1494 aa		18.36	■□□□□ 0.53
FDPS-204	ENST00000461507	UNC5CL	Q8IV45	518 aa		18.35	■□□□□ 0.53
FDPS-204	ENST00000461507	PMFBP1	Q8TBY8	1022 aa		18.35	■□□□□ 0.53
FDPS-204	ENST00000461507	GPRASP1	Q5JY77	1395 aa		18.34	■□□□□ 0.53
FDPS-204	ENST00000461507	GJD4	Q96KN9	370 aa	Predicted RBP	18.34	■□□□□ 0.53
FDPS-204	ENST00000461507	COL14A1	Q05707	1796 aa	Known RBP	18.34	■□□□□ 0.53
FDPS-204	ENST00000461507	SIN3A	Q96ST3	1273 aa		18.33	■□□□□ 0.52
FDPS-204	ENST00000461507	BRWD3	Q6RI45	1802 aa		18.32	■□□□□ 0.52
FDPS-204	ENST00000461507	TRPM1	Q7Z4N2	1603 aa		18.31	■□□□□ 0.52
FDPS-204	ENST00000461507	PHRF1	Q9P1Y6	1649 aa	Known RBP	18.31	■□□□□ 0.52
FDPS-204	ENST00000461507	CABLES1	Q8TDN4	633 aa		18.31	■□□□□ 0.52
FDPS-204	ENST00000461507	QRICH2	Q9H0J4	1663 aa		18.31	■□□□□ 0.52
FDPS-204	ENST00000461507	POLR3A	O14802	1390 aa	Predicted RBP	18.3	■□□□□ 0.52
FDPS-204	ENST00000461507	VPS72	Q15906	364 aa		18.29	■□□□□ 0.52
FDPS-204	ENST00000461507	NUDT16	Q96DE0	195 aa	Known RBP	18.29	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms