RNA–Protein interactions for RNA: ENST00000460215.5

SCMH1-212, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-212ENST00000460215 BRWD3Q6RI45 1802 aa13.39□□□□□ -0.27
SCMH1-212ENST00000460215 R3HDM1Q15032 1099 aaKnown RBP13.39□□□□□ -0.27
SCMH1-212ENST00000460215 MARF1Q9Y4F3 1742 aaKnown RBP13.39□□□□□ -0.27
SCMH1-212ENST00000460215 IFFO2Q5TF58 517 aa13.37□□□□□ -0.27
SCMH1-212ENST00000460215 SLIT2O94813 1529 aa13.37□□□□□ -0.27
SCMH1-212ENST00000460215 NPHP3Q7Z494 1330 aa13.37□□□□□ -0.27
SCMH1-212ENST00000460215 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
SCMH1-212ENST00000460215 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
SCMH1-212ENST00000460215 PXDNQ92626 1479 aa13.35□□□□□ -0.27
SCMH1-212ENST00000460215 VPS8Q8N3P4 1428 aa13.34□□□□□ -0.27
SCMH1-212ENST00000460215 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
SCMH1-212ENST00000460215 ADGRL2O95490 1459 aa13.34□□□□□ -0.27
SCMH1-212ENST00000460215 E9PCH4 1651 aa13.34□□□□□ -0.27
SCMH1-212ENST00000460215 EN1Q05925 392 aaPredicted RBP13.33□□□□□ -0.28
SCMH1-212ENST00000460215 IQGAP3Q86VI3 1631 aa13.32□□□□□ -0.28
SCMH1-212ENST00000460215 A0A0G2JS52 829 aa13.32□□□□□ -0.28
SCMH1-212ENST00000460215 MYT1Q01538 1121 aa13.32□□□□□ -0.28
SCMH1-212ENST00000460215 CCDC9Q9Y3X0 531 aaKnown RBP13.32□□□□□ -0.28
SCMH1-212ENST00000460215 VPS72Q15906 364 aa13.31□□□□□ -0.28
SCMH1-212ENST00000460215 ZNF326Q5BKZ1 582 aaKnown RBP13.31□□□□□ -0.28
SCMH1-212ENST00000460215 ESCO1Q5FWF5 840 aa13.31□□□□□ -0.28
SCMH1-212ENST00000460215 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
SCMH1-212ENST00000460215 FOXO3O43524 673 aa13.3□□□□□ -0.28
SCMH1-212ENST00000460215 USP32Q8NFA0 1604 aa13.29□□□□□ -0.28
SCMH1-212ENST00000460215 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
SCMH1-212ENST00000460215 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
SCMH1-212ENST00000460215 ONECUT3O60422 494 aaPredicted RBP13.29□□□□□ -0.28
SCMH1-212ENST00000460215 HAP1P54257 671 aaPredicted RBP13.27□□□□□ -0.29
SCMH1-212ENST00000460215 LRPPRCP42704 1394 aaKnown RBP13.27□□□□□ -0.29
SCMH1-212ENST00000460215 DISP2A7MBM2 1401 aa13.27□□□□□ -0.29
SCMH1-212ENST00000460215 RGPD1P0DJD0 1748 aa13.27□□□□□ -0.29
SCMH1-212ENST00000460215 CDC42BPGQ6DT37 1551 aa13.25□□□□□ -0.29
SCMH1-212ENST00000460215 PPP1R1BQ9UD71 204 aaPredicted RBP13.25□□□□□ -0.29
SCMH1-212ENST00000460215 HFM1A2PYH4 1435 aa13.24□□□□□ -0.29
SCMH1-212ENST00000460215 SPATA31A3Q5VYP0 1347 aa13.24□□□□□ -0.29
SCMH1-212ENST00000460215 EZH2Q15910 746 aaKnown RBP13.24□□□□□ -0.29
SCMH1-212ENST00000460215 PLCH1Q4KWH8 1693 aa13.24□□□□□ -0.29
SCMH1-212ENST00000460215 NEXMIFQ5QGS0 1516 aa13.23□□□□□ -0.29
SCMH1-212ENST00000460215 PRAG1Q86YV5 1406 aa13.23□□□□□ -0.29
SCMH1-212ENST00000460215 NWD2Q9ULI1 1742 aa13.23□□□□□ -0.29
SCMH1-212ENST00000460215 FAM98CQ17RN3 349 aaKnown RBP13.23□□□□□ -0.29
SCMH1-212ENST00000460215 FAM182BQ5T319 152 aa13.23□□□□□ -0.29
SCMH1-212ENST00000460215 ADGRB2O60241 1585 aa13.23□□□□□ -0.29
SCMH1-212ENST00000460215 NINLQ9Y2I6 1382 aa13.22□□□□□ -0.29
SCMH1-212ENST00000460215 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
SCMH1-212ENST00000460215 ZNF784Q8NCA9 323 aaPredicted RBP13.22□□□□□ -0.29
SCMH1-212ENST00000460215 TNS1Q9HBL0 1735 aaKnown RBP13.22□□□□□ -0.29
SCMH1-212ENST00000460215 NUTM2FA1L443 756 aa13.21□□□□□ -0.29
SCMH1-212ENST00000460215 CCDC144AA2RUR9 1427 aa13.21□□□□□ -0.3
SCMH1-212ENST00000460215 APLP2Q06481 763 aa13.2□□□□□ -0.3
SCMH1-212ENST00000460215 FAM50AQ14320 339 aaKnown RBP13.2□□□□□ -0.3
SCMH1-212ENST00000460215 CABLES1Q8TDN4 633 aa13.2□□□□□ -0.3
SCMH1-212ENST00000460215 CAMKK2Q96RR4 588 aa13.2□□□□□ -0.3
SCMH1-212ENST00000460215 NUP155O75694 1391 aa13.2□□□□□ -0.3
SCMH1-212ENST00000460215 SPON1Q9HCB6 807 aa13.19□□□□□ -0.3
SCMH1-212ENST00000460215 NAIPQ13075 1403 aa13.18□□□□□ -0.3
SCMH1-212ENST00000460215 TNS3Q68CZ2 1445 aa13.18□□□□□ -0.3
SCMH1-212ENST00000460215 PARD3Q8TEW0 1356 aa13.18□□□□□ -0.3
SCMH1-212ENST00000460215 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
SCMH1-212ENST00000460215 KRT28Q7Z3Y7 464 aa13.17□□□□□ -0.3
SCMH1-212ENST00000460215 CAMTA1Q9Y6Y1 1673 aa13.17□□□□□ -0.3
SCMH1-212ENST00000460215 TRIM37O94972 964 aa13.16□□□□□ -0.3
SCMH1-212ENST00000460215 KIF1AQ12756 1690 aa13.15□□□□□ -0.3
SCMH1-212ENST00000460215 FAM83GA6ND36 823 aa13.15□□□□□ -0.3
SCMH1-212ENST00000460215 KCNQ2O43526 872 aa13.15□□□□□ -0.3
SCMH1-212ENST00000460215 APBA3O96018 575 aa13.15□□□□□ -0.3
SCMH1-212ENST00000460215 NBPF8Q3BBV2 869 aa13.15□□□□□ -0.3
SCMH1-212ENST00000460215 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
SCMH1-212ENST00000460215 NRAPQ86VF7 1730 aa13.14□□□□□ -0.31
SCMH1-212ENST00000460215 ABCA3Q99758 1704 aa13.14□□□□□ -0.31
SCMH1-212ENST00000460215 LMOD2Q6P5Q4 547 aa13.14□□□□□ -0.31
SCMH1-212ENST00000460215 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
SCMH1-212ENST00000460215 THSD7AQ9UPZ6 1657 aa13.13□□□□□ -0.31
SCMH1-212ENST00000460215 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
SCMH1-212ENST00000460215 BTG4Q9NY30 223 aa13.13□□□□□ -0.31
SCMH1-212ENST00000460215 RREB1Q92766 1687 aa13.12□□□□□ -0.31
SCMH1-212ENST00000460215 ARHGEF10O15013 1369 aa13.12□□□□□ -0.31
SCMH1-212ENST00000460215 PSME1Q06323 249 aa13.12□□□□□ -0.31
SCMH1-212ENST00000460215 FAM196AQ6ZSG2 479 aa13.12□□□□□ -0.31
SCMH1-212ENST00000460215 NUP188Q5SRE5 1749 aa13.12□□□□□ -0.31
SCMH1-212ENST00000460215 SPATA31A5Q5VU36 1347 aa13.12□□□□□ -0.31
SCMH1-212ENST00000460215 SPATA31A7Q8IWB4 1347 aa13.12□□□□□ -0.31
SCMH1-212ENST00000460215 WAPLQ7Z5K2 1190 aa13.1□□□□□ -0.31
SCMH1-212ENST00000460215 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
SCMH1-212ENST00000460215 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
SCMH1-212ENST00000460215 ROCK1Q13464 1354 aa13.09□□□□□ -0.31
SCMH1-212ENST00000460215 CEP350Q5VT06 3117 aa13.08□□□□□ -0.32
SCMH1-212ENST00000460215 STK26Q9P289 416 aa13.08□□□□□ -0.32
SCMH1-212ENST00000460215 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
SCMH1-212ENST00000460215 COL14A1Q05707 1796 aaKnown RBP13.07□□□□□ -0.32
SCMH1-212ENST00000460215 RRBP1Q9P2E9 1410 aaKnown RBP13.07□□□□□ -0.32
SCMH1-212ENST00000460215 KIF1BO60333 1816 aa13.07□□□□□ -0.32
SCMH1-212ENST00000460215 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
SCMH1-212ENST00000460215 PLEKHH1Q9ULM0 1364 aa13.07□□□□□ -0.32
SCMH1-212ENST00000460215 TECPR2O15040 1411 aa13.06□□□□□ -0.32
SCMH1-212ENST00000460215 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
SCMH1-212ENST00000460215 SPATA31A1Q5TZJ5 1347 aa13.04□□□□□ -0.32
SCMH1-212ENST00000460215 RPGRIP1LQ68CZ1 1315 aa13.04□□□□□ -0.32
SCMH1-212ENST00000460215 GIGYF1O75420 1035 aaPredicted RBP13.03□□□□□ -0.32
SCMH1-212ENST00000460215 UTRNP46939 3433 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms