RNA–Protein interactions for RNA: ENST00000460072.5

THUMPD2-203, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 3,148 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-203ENST00000460072 ITSN1Q15811 1721 aa10.82□□□□□ -0.68
THUMPD2-203ENST00000460072 RXRBP28702 533 aa10.82□□□□□ -0.68
THUMPD2-203ENST00000460072 SLIT2O94813 1529 aa10.81□□□□□ -0.68
THUMPD2-203ENST00000460072 RBM6P78332 1123 aaKnown RBP10.81□□□□□ -0.68
THUMPD2-203ENST00000460072 SIRT1Q96EB6 747 aa10.81□□□□□ -0.68
THUMPD2-203ENST00000460072 PIK3C2GO75747 1445 aa10.81□□□□□ -0.68
THUMPD2-203ENST00000460072 AFF2P51816 1311 aa10.8□□□□□ -0.68
THUMPD2-203ENST00000460072 FAM50AQ14320 339 aaKnown RBP10.8□□□□□ -0.68
THUMPD2-203ENST00000460072 FNBP4Q8N3X1 1017 aaPredicted RBP10.8□□□□□ -0.68
THUMPD2-203ENST00000460072 ROBO2Q9HCK4 1378 aa10.8□□□□□ -0.68
THUMPD2-203ENST00000460072 COL14A1Q05707 1796 aaKnown RBP10.8□□□□□ -0.68
THUMPD2-203ENST00000460072 LRPPRCP42704 1394 aaKnown RBP10.79□□□□□ -0.68
THUMPD2-203ENST00000460072 RGPD3A6NKT7 1758 aaPredicted RBP10.79□□□□□ -0.68
THUMPD2-203ENST00000460072 RGPD8O14715 1765 aaPredicted RBP10.79□□□□□ -0.68
THUMPD2-203ENST00000460072 RGPD4Q7Z3J3 1758 aa10.79□□□□□ -0.68
THUMPD2-203ENST00000460072 KIAA1210Q9ULL0 1709 aa10.79□□□□□ -0.68
THUMPD2-203ENST00000460072 ANKRD30BQ9BXX2 1392 aa10.79□□□□□ -0.68
THUMPD2-203ENST00000460072 THSD7AQ9UPZ6 1657 aa10.79□□□□□ -0.68
THUMPD2-203ENST00000460072 MEX3CQ5U5Q3 659 aaKnown RBP10.78□□□□□ -0.68
THUMPD2-203ENST00000460072 CCDC125Q86Z20 511 aa10.78□□□□□ -0.68
THUMPD2-203ENST00000460072 TOPAZ1Q8N9V7 1692 aa10.78□□□□□ -0.68
THUMPD2-203ENST00000460072 ABCC11Q96J66 1382 aa10.78□□□□□ -0.68
THUMPD2-203ENST00000460072 TNS1Q9HBL0 1735 aaKnown RBP10.78□□□□□ -0.68
THUMPD2-203ENST00000460072 ANKARQ7Z5J8 1434 aa10.78□□□□□ -0.68
THUMPD2-203ENST00000460072 CCDC144AA2RUR9 1427 aa10.77□□□□□ -0.68
THUMPD2-203ENST00000460072 VGFO15240 615 aaPredicted RBP10.77□□□□□ -0.69
THUMPD2-203ENST00000460072 BCL9LQ86UU0 1499 aa10.77□□□□□ -0.69
THUMPD2-203ENST00000460072 FOXD1Q16676 465 aa10.77□□□□□ -0.69
THUMPD2-203ENST00000460072 BCANQ96GW7 911 aa10.76□□□□□ -0.69
THUMPD2-203ENST00000460072 RREB1Q92766 1687 aa10.75□□□□□ -0.69
THUMPD2-203ENST00000460072 SBNO1A3KN83 1393 aa10.75□□□□□ -0.69
THUMPD2-203ENST00000460072 RBM33Q96EV2 1170 aaKnown RBP10.75□□□□□ -0.69
THUMPD2-203ENST00000460072 NGLY1Q96IV0 654 aa10.75□□□□□ -0.69
THUMPD2-203ENST00000460072 PHRF1Q9P1Y6 1649 aaKnown RBP10.75□□□□□ -0.69
THUMPD2-203ENST00000460072 TRPC5Q9UL62 973 aaPredicted RBP10.74□□□□□ -0.69
THUMPD2-203ENST00000460072 NPHP3Q7Z494 1330 aa10.74□□□□□ -0.69
THUMPD2-203ENST00000460072 ADGRB1O14514 1584 aa10.74□□□□□ -0.69
THUMPD2-203ENST00000460072 C14orf37Q86TY3 774 aa10.73□□□□□ -0.69
THUMPD2-203ENST00000460072 ARHGEF28Q8N1W1 1705 aaKnown RBP10.73□□□□□ -0.69
THUMPD2-203ENST00000460072 WNK3Q9BYP7 1800 aa10.73□□□□□ -0.69
THUMPD2-203ENST00000460072 DISP2A7MBM2 1401 aa10.72□□□□□ -0.69
THUMPD2-203ENST00000460072 TNS3Q68CZ2 1445 aa10.72□□□□□ -0.69
THUMPD2-203ENST00000460072 RALGAPBQ86X10 1494 aa10.71□□□□□ -0.69
THUMPD2-203ENST00000460072 BLMP54132 1417 aaPredicted RBP10.71□□□□□ -0.69
THUMPD2-203ENST00000460072 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.7
THUMPD2-203ENST00000460072 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.7
THUMPD2-203ENST00000460072 TULP4Q9NRJ4 1543 aa10.7□□□□□ -0.7
THUMPD2-203ENST00000460072 EIF3AQ14152 1382 aaKnown RBP10.7□□□□□ -0.7
THUMPD2-203ENST00000460072 QTRT2Q9H974 415 aaKnown RBP10.7□□□□□ -0.7
THUMPD2-203ENST00000460072 TRIM52Q96A61 297 aa10.68□□□□□ -0.7
THUMPD2-203ENST00000460072 ARHGEF10O15013 1369 aa10.68□□□□□ -0.7
THUMPD2-203ENST00000460072 ATP7BP35670 1465 aa10.68□□□□□ -0.7
THUMPD2-203ENST00000460072 ONECUT3O60422 494 aaPredicted RBP10.67□□□□□ -0.7
THUMPD2-203ENST00000460072 PARP4Q9UKK3 1724 aaKnown RBP10.67□□□□□ -0.7
THUMPD2-203ENST00000460072 USP54Q70EL1 1684 aa10.67□□□□□ -0.7
THUMPD2-203ENST00000460072 SPATA31A3Q5VYP0 1347 aa10.67□□□□□ -0.7
THUMPD2-203ENST00000460072 HRCP23327 699 aa10.67□□□□□ -0.7
THUMPD2-203ENST00000460072 ZNF326Q5BKZ1 582 aaKnown RBP10.67□□□□□ -0.7
THUMPD2-203ENST00000460072 LMO7Q8WWI1 1683 aa10.67□□□□□ -0.7
THUMPD2-203ENST00000460072 SENP3Q9H4L4 574 aaPredicted RBP10.67□□□□□ -0.7
THUMPD2-203ENST00000460072 USP21Q9UK80 565 aa10.66□□□□□ -0.7
THUMPD2-203ENST00000460072 NUP188Q5SRE5 1749 aa10.66□□□□□ -0.7
THUMPD2-203ENST00000460072 NUTM2DQ5VT03 806 aaPredicted RBP10.65□□□□□ -0.7
THUMPD2-203ENST00000460072 C8orf37Q96NL8 207 aa10.65□□□□□ -0.7
THUMPD2-203ENST00000460072 STAC3Q96MF2 364 aa10.64□□□□□ -0.71
THUMPD2-203ENST00000460072 NRKQ7Z2Y5 1582 aa10.64□□□□□ -0.71
THUMPD2-203ENST00000460072 NUTM2BA6NNL0 878 aaPredicted RBP10.63□□□□□ -0.71
THUMPD2-203ENST00000460072 NUTM2EB1AL46 878 aaPredicted RBP10.63□□□□□ -0.71
THUMPD2-203ENST00000460072 NUTM2AQ8IVF1 878 aaPredicted RBP10.63□□□□□ -0.71
THUMPD2-203ENST00000460072 PEAK1Q9H792 1746 aa10.63□□□□□ -0.71
THUMPD2-203ENST00000460072 VPS72Q15906 364 aa10.63□□□□□ -0.71
THUMPD2-203ENST00000460072 ABCC6O95255 1503 aa10.63□□□□□ -0.71
THUMPD2-203ENST00000460072 GJD4Q96KN9 370 aaPredicted RBP10.62□□□□□ -0.71
THUMPD2-203ENST00000460072 ORAI2Q96SN7 254 aa10.62□□□□□ -0.71
THUMPD2-203ENST00000460072 UNC5CLQ8IV45 518 aa10.62□□□□□ -0.71
THUMPD2-203ENST00000460072 C14orf93Q9H972 538 aaKnown RBP10.62□□□□□ -0.71
THUMPD2-203ENST00000460072 ADGRF5Q8IZF2 1346 aa10.61□□□□□ -0.71
THUMPD2-203ENST00000460072 BRD4O60885 1362 aaPredicted RBP10.6□□□□□ -0.71
THUMPD2-203ENST00000460072 DHX57Q6P158 1386 aaKnown RBP10.6□□□□□ -0.71
THUMPD2-203ENST00000460072 PARD3Q8TEW0 1356 aa10.6□□□□□ -0.71
THUMPD2-203ENST00000460072 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
THUMPD2-203ENST00000460072 SBF2Q86WG5 1849 aa10.6□□□□□ -0.71
THUMPD2-203ENST00000460072 PLEKHH1Q9ULM0 1364 aa10.6□□□□□ -0.71
THUMPD2-203ENST00000460072 PSME1Q06323 249 aa10.59□□□□□ -0.71
THUMPD2-203ENST00000460072 ZRANB1Q9UGI0 708 aa10.59□□□□□ -0.71
THUMPD2-203ENST00000460072 COL24A1Q17RW2 1714 aa10.58□□□□□ -0.71
THUMPD2-203ENST00000460072 DDX17Q92841 729 aaKnown RBP10.58□□□□□ -0.72
THUMPD2-203ENST00000460072 AKAP12Q02952 1782 aa10.58□□□□□ -0.72
THUMPD2-203ENST00000460072 CASZ1Q86V15 1759 aa10.58□□□□□ -0.72
THUMPD2-203ENST00000460072 QSER1Q2KHR3 1735 aa10.58□□□□□ -0.72
THUMPD2-203ENST00000460072 SLC4A1APQ9BWU0 796 aaKnown RBP10.58□□□□□ -0.72
THUMPD2-203ENST00000460072 TRPM1Q7Z4N2 1603 aa10.57□□□□□ -0.72
THUMPD2-203ENST00000460072 COL18A1P39060 1754 aa10.57□□□□□ -0.72
THUMPD2-203ENST00000460072 SLIT3O75094 1523 aa10.56□□□□□ -0.72
THUMPD2-203ENST00000460072 POLR3AO14802 1390 aaPredicted RBP10.55□□□□□ -0.72
THUMPD2-203ENST00000460072 ADAMTS2O95450 1211 aa10.55□□□□□ -0.72
THUMPD2-203ENST00000460072 ESCO1Q5FWF5 840 aa10.55□□□□□ -0.72
THUMPD2-203ENST00000460072 LRRC37A3O60309 1634 aa10.54□□□□□ -0.72
THUMPD2-203ENST00000460072 MPHOSPH9Q99550 1183 aa10.54□□□□□ -0.72
THUMPD2-203ENST00000460072 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms