RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 ERC2O15083 957 aa14.28□□□□□ -0.12
SMARCAD1-204ENST00000457823 TPD52L1Q16890 204 aaPredicted RBP14.28□□□□□ -0.12
SMARCAD1-204ENST00000457823 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
SMARCAD1-204ENST00000457823 TPM3P06753 285 aa14.28□□□□□ -0.12
SMARCAD1-204ENST00000457823 SYNJ2O15056 1496 aa14.28□□□□□ -0.12
SMARCAD1-204ENST00000457823 VPS37DQ86XT2 251 aa14.28□□□□□ -0.12
SMARCAD1-204ENST00000457823 TSR2Q969E8 191 aaKnown RBP14.28□□□□□ -0.12
SMARCAD1-204ENST00000457823 NESP48681 1621 aa14.28□□□□□ -0.12
SMARCAD1-204ENST00000457823 CABP1Q9NZU7 370 aa14.27□□□□□ -0.12
SMARCAD1-204ENST00000457823 SMC3Q9UQE7 1217 aa14.27□□□□□ -0.12
SMARCAD1-204ENST00000457823 BCAR3O75815 825 aa14.27□□□□□ -0.13
SMARCAD1-204ENST00000457823 PDE4CQ08493 712 aa14.27□□□□□ -0.13
SMARCAD1-204ENST00000457823 PRXQ9BXM0 1461 aa14.27□□□□□ -0.13
SMARCAD1-204ENST00000457823 SCAPERQ9BY12 1400 aa14.27□□□□□ -0.13
SMARCAD1-204ENST00000457823 SURF6O75683 361 aaKnown RBP14.27□□□□□ -0.13
SMARCAD1-204ENST00000457823 TRIM29Q14134 588 aa14.27□□□□□ -0.13
SMARCAD1-204ENST00000457823 CCDC184Q52MB2 194 aa14.27□□□□□ -0.13
SMARCAD1-204ENST00000457823 ERICH3Q5RHP9 1530 aa14.26□□□□□ -0.13
SMARCAD1-204ENST00000457823 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
SMARCAD1-204ENST00000457823 BICD2Q8TD16 824 aa14.26□□□□□ -0.13
SMARCAD1-204ENST00000457823 NUCB2P80303 420 aa14.26□□□□□ -0.13
SMARCAD1-204ENST00000457823 TWISTNBQ3B726 338 aaPredicted RBP14.26□□□□□ -0.13
SMARCAD1-204ENST00000457823 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
SMARCAD1-204ENST00000457823 KIAA1107Q9UPP5 1409 aa14.26□□□□□ -0.13
SMARCAD1-204ENST00000457823 RAD21O60216 631 aa14.25□□□□□ -0.13
SMARCAD1-204ENST00000457823 CDC45O75419 566 aa14.25□□□□□ -0.13
SMARCAD1-204ENST00000457823 GNAI3P08754 354 aa14.25□□□□□ -0.13
SMARCAD1-204ENST00000457823 C9orf84Q5VXU9 1444 aa14.25□□□□□ -0.13
SMARCAD1-204ENST00000457823 CLASRPQ8N2M8 674 aaKnown RBP14.25□□□□□ -0.13
SMARCAD1-204ENST00000457823 ESCO1Q5FWF5 840 aa14.25□□□□□ -0.13
SMARCAD1-204ENST00000457823 GAS2L2Q8NHY3 880 aa14.25□□□□□ -0.13
SMARCAD1-204ENST00000457823 PDZRN3Q9UPQ7 1066 aa14.25□□□□□ -0.13
SMARCAD1-204ENST00000457823 RAPGEF3O95398 923 aa14.24□□□□□ -0.13
SMARCAD1-204ENST00000457823 SULT6B1Q6IMI4 303 aa14.24□□□□□ -0.13
SMARCAD1-204ENST00000457823 NOL10Q9BSC4 688 aaKnown RBP14.24□□□□□ -0.13
SMARCAD1-204ENST00000457823 PDE3AQ14432 1141 aa14.24□□□□□ -0.13
SMARCAD1-204ENST00000457823 NFKBIBQ15653 356 aa14.24□□□□□ -0.13
SMARCAD1-204ENST00000457823 CCDC30Q5VVM6 783 aa14.24□□□□□ -0.13
SMARCAD1-204ENST00000457823 CDK19Q9BWU1 502 aa14.24□□□□□ -0.13
SMARCAD1-204ENST00000457823 C1orf115Q9H7X2 142 aa14.24□□□□□ -0.13
SMARCAD1-204ENST00000457823 TSR1Q2NL82 804 aaKnown RBP14.23□□□□□ -0.13
SMARCAD1-204ENST00000457823 WASHC4Q2M389 1173 aa14.23□□□□□ -0.13
SMARCAD1-204ENST00000457823 NFXL1Q6ZNB6 911 aa14.23□□□□□ -0.13
SMARCAD1-204ENST00000457823 SLC52A1Q9NWF4 448 aa14.23□□□□□ -0.13
SMARCAD1-204ENST00000457823 AMOTL1Q8IY63 956 aa14.22□□□□□ -0.13
SMARCAD1-204ENST00000457823 TROQ12816 1431 aaPredicted RBP14.22□□□□□ -0.13
SMARCAD1-204ENST00000457823 DHX16O60231 1041 aaKnown RBP14.22□□□□□ -0.13
SMARCAD1-204ENST00000457823 FOSBP53539 338 aa14.22□□□□□ -0.13
SMARCAD1-204ENST00000457823 NOB1Q9ULX3 412 aaKnown RBP14.22□□□□□ -0.13
SMARCAD1-204ENST00000457823 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
SMARCAD1-204ENST00000457823 SLC4A2P04920 1241 aa14.21□□□□□ -0.13
SMARCAD1-204ENST00000457823 PROSER2Q86WR7 435 aaPredicted RBP14.21□□□□□ -0.13
SMARCAD1-204ENST00000457823 CCAR2Q8N163 923 aaKnown RBP14.21□□□□□ -0.13
SMARCAD1-204ENST00000457823 GPRASP1Q5JY77 1395 aa14.21□□□□□ -0.13
SMARCAD1-204ENST00000457823 RALYLQ86SE5 291 aaKnown RBP14.21□□□□□ -0.13
SMARCAD1-204ENST00000457823 SLC26A8Q96RN1 970 aa14.21□□□□□ -0.13
SMARCAD1-204ENST00000457823 CEP89Q96ST8 783 aa14.2□□□□□ -0.14
SMARCAD1-204ENST00000457823 PLEKHO1Q53GL0 409 aaPredicted RBP14.2□□□□□ -0.14
SMARCAD1-204ENST00000457823 AKNAQ7Z591 1439 aa14.2□□□□□ -0.14
SMARCAD1-204ENST00000457823 NEK4P51957 841 aa14.2□□□□□ -0.14
SMARCAD1-204ENST00000457823 FSD1Q9BTV5 496 aa14.19□□□□□ -0.14
SMARCAD1-204ENST00000457823 TPM1P09493 284 aa14.19□□□□□ -0.14
SMARCAD1-204ENST00000457823 HDGFL1Q5TGJ6 251 aa14.19□□□□□ -0.14
SMARCAD1-204ENST00000457823 GOLGA6L1Q8N7Z2 621 aa14.19□□□□□ -0.14
SMARCAD1-204ENST00000457823 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
SMARCAD1-204ENST00000457823 ERICH2A1L162 156 aa14.18□□□□□ -0.14
SMARCAD1-204ENST00000457823 ZNF592Q92610 1267 aa14.18□□□□□ -0.14
SMARCAD1-204ENST00000457823 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
SMARCAD1-204ENST00000457823 CNTROBQ8N137 903 aa14.18□□□□□ -0.14
SMARCAD1-204ENST00000457823 THEMISQ8N1K5 641 aaPredicted RBP14.18□□□□□ -0.14
SMARCAD1-204ENST00000457823 FBXW7Q969H0 707 aa14.18□□□□□ -0.14
SMARCAD1-204ENST00000457823 FAM177BA6PVY3 158 aa14.18□□□□□ -0.14
SMARCAD1-204ENST00000457823 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
SMARCAD1-204ENST00000457823 A0A0U1RQG5 324 aaPredicted RBP14.17□□□□□ -0.14
SMARCAD1-204ENST00000457823 GNAI2P04899 355 aa14.17□□□□□ -0.14
SMARCAD1-204ENST00000457823 CCDC73Q6ZRK6 1079 aa14.17□□□□□ -0.14
SMARCAD1-204ENST00000457823 TRIM34Q9BYJ4 488 aa14.17□□□□□ -0.14
SMARCAD1-204ENST00000457823 HSP90AA2PQ14568 343 aaPredicted RBP14.16□□□□□ -0.14
SMARCAD1-204ENST00000457823 ATF7IPQ6VMQ6 1270 aa14.16□□□□□ -0.14
SMARCAD1-204ENST00000457823 WDR63Q8IWG1 891 aa14.16□□□□□ -0.14
SMARCAD1-204ENST00000457823 SASS6Q6UVJ0 657 aa14.16□□□□□ -0.14
SMARCAD1-204ENST00000457823 GCC1Q96CN9 775 aa14.16□□□□□ -0.14
SMARCAD1-204ENST00000457823 SAFBQ15424 915 aaKnown RBP eCLIP14.16□□□□□ -0.14
SMARCAD1-204ENST00000457823 ZNF428Q96B54 188 aa14.16□□□□□ -0.14
SMARCAD1-204ENST00000457823 RRS1Q15050 365 aaKnown RBP14.15□□□□□ -0.14
SMARCAD1-204ENST00000457823 CCDC27Q2M243 656 aa14.15□□□□□ -0.14
SMARCAD1-204ENST00000457823 ANO8Q9HCE9 1232 aaPredicted RBP14.15□□□□□ -0.14
SMARCAD1-204ENST00000457823 TPM2P07951 284 aa14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 DNAJC2Q99543 621 aaKnown RBP14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 EFCAB5A4FU69 1503 aa14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 FYB1O15117 783 aa14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 RNF214Q8ND24 703 aa14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 RBM33Q96EV2 1170 aaKnown RBP14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 STRN4Q9NRL3 753 aa14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 PSMA5P28066 241 aa14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 ZNF530Q6P9A1 599 aaPredicted RBP14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 PCMTD1Q96MG8 357 aaPredicted RBP14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
SMARCAD1-204ENST00000457823 DAPK1P53355 1430 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms