RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 SOS2Q07890 1332 aaPredicted RBP12.98□□□□□ -0.33
PKP4-207ENST00000457109 FOXO3O43524 673 aa12.98□□□□□ -0.33
PKP4-207ENST00000457109 UPF1Q92900 1129 aaKnown RBP eCLIP12.98□□□□□ -0.33
PKP4-207ENST00000457109 USP21Q9UK80 565 aa12.98□□□□□ -0.33
PKP4-207ENST00000457109 HAP1P54257 671 aaPredicted RBP12.96□□□□□ -0.33
PKP4-207ENST00000457109 TRPC5Q9UL62 973 aaPredicted RBP12.96□□□□□ -0.33
PKP4-207ENST00000457109 SHPRHQ149N8 1683 aa12.96□□□□□ -0.34
PKP4-207ENST00000457109 DHX57Q6P158 1386 aaKnown RBP12.95□□□□□ -0.34
PKP4-207ENST00000457109 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
PKP4-207ENST00000457109 PSME1Q06323 249 aa12.95□□□□□ -0.34
PKP4-207ENST00000457109 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
PKP4-207ENST00000457109 POGKQ9P215 609 aa12.95□□□□□ -0.34
PKP4-207ENST00000457109 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
PKP4-207ENST00000457109 C14orf93Q9H972 538 aaKnown RBP12.94□□□□□ -0.34
PKP4-207ENST00000457109 CDK12Q9NYV4 1490 aaPredicted RBP12.92□□□□□ -0.34
PKP4-207ENST00000457109 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
PKP4-207ENST00000457109 SPATA31E1Q6ZUB1 1445 aa12.92□□□□□ -0.34
PKP4-207ENST00000457109 KRT28Q7Z3Y7 464 aa12.92□□□□□ -0.34
PKP4-207ENST00000457109 PRAG1Q86YV5 1406 aa12.92□□□□□ -0.34
PKP4-207ENST00000457109 FNBP4Q8N3X1 1017 aaPredicted RBP12.92□□□□□ -0.34
PKP4-207ENST00000457109 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
PKP4-207ENST00000457109 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
PKP4-207ENST00000457109 KDM2AQ9Y2K7 1162 aa12.91□□□□□ -0.34
PKP4-207ENST00000457109 YTHDC2Q9H6S0 1430 aaKnown RBP12.9□□□□□ -0.34
PKP4-207ENST00000457109 STAC3Q96MF2 364 aa12.9□□□□□ -0.34
PKP4-207ENST00000457109 PRAM1Q96QH2 718 aa12.9□□□□□ -0.34
PKP4-207ENST00000457109 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
PKP4-207ENST00000457109 NHSL1Q5SYE7 1610 aa12.89□□□□□ -0.35
PKP4-207ENST00000457109 NALCNQ8IZF0 1738 aa12.89□□□□□ -0.35
PKP4-207ENST00000457109 DCAF11Q8TEB1 546 aa12.89□□□□□ -0.35
PKP4-207ENST00000457109 TECPR2O15040 1411 aa12.88□□□□□ -0.35
PKP4-207ENST00000457109 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
PKP4-207ENST00000457109 RAB3GAP2Q9H2M9 1393 aa12.88□□□□□ -0.35
PKP4-207ENST00000457109 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
PKP4-207ENST00000457109 ATAD2Q6PL18 1390 aa12.87□□□□□ -0.35
PKP4-207ENST00000457109 PLEKHH1Q9ULM0 1364 aa12.87□□□□□ -0.35
PKP4-207ENST00000457109 TRAK1Q9UPV9 953 aa12.87□□□□□ -0.35
PKP4-207ENST00000457109 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
PKP4-207ENST00000457109 PPLO60437 1756 aa12.86□□□□□ -0.35
PKP4-207ENST00000457109 HRCP23327 699 aa12.86□□□□□ -0.35
PKP4-207ENST00000457109 GJD4Q96KN9 370 aaPredicted RBP12.86□□□□□ -0.35
PKP4-207ENST00000457109 UNC5CLQ8IV45 518 aa12.85□□□□□ -0.35
PKP4-207ENST00000457109 CCDC9Q9Y3X0 531 aaKnown RBP12.85□□□□□ -0.35
PKP4-207ENST00000457109 CDC42BPGQ6DT37 1551 aa12.85□□□□□ -0.35
PKP4-207ENST00000457109 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
PKP4-207ENST00000457109 PMFBP1Q8TBY8 1022 aa12.84□□□□□ -0.35
PKP4-207ENST00000457109 RGS12O14924 1447 aa12.83□□□□□ -0.36
PKP4-207ENST00000457109 EIF3AQ14152 1382 aaKnown RBP12.82□□□□□ -0.36
PKP4-207ENST00000457109 GPRASP1Q5JY77 1395 aa12.82□□□□□ -0.36
PKP4-207ENST00000457109 SETD1AO15047 1707 aaKnown RBP12.82□□□□□ -0.36
PKP4-207ENST00000457109 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
PKP4-207ENST00000457109 NGDNQ8NEJ9 315 aaKnown RBP12.82□□□□□ -0.36
PKP4-207ENST00000457109 HIRIP3Q9BW71 556 aaPredicted RBP12.82□□□□□ -0.36
PKP4-207ENST00000457109 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
PKP4-207ENST00000457109 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
PKP4-207ENST00000457109 MYOM2P54296 1465 aa12.81□□□□□ -0.36
PKP4-207ENST00000457109 PXDNQ92626 1479 aa12.81□□□□□ -0.36
PKP4-207ENST00000457109 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
PKP4-207ENST00000457109 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
PKP4-207ENST00000457109 ATRNO75882 1429 aa12.8□□□□□ -0.36
PKP4-207ENST00000457109 A0A0G2JS52 829 aa12.8□□□□□ -0.36
PKP4-207ENST00000457109 PAK3O75914 559 aaPredicted RBP12.8□□□□□ -0.36
PKP4-207ENST00000457109 MYT1Q01538 1121 aa12.8□□□□□ -0.36
PKP4-207ENST00000457109 LAMC1P11047 1609 aa12.8□□□□□ -0.36
PKP4-207ENST00000457109 SBNO1A3KN83 1393 aa12.8□□□□□ -0.36
PKP4-207ENST00000457109 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
PKP4-207ENST00000457109 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
PKP4-207ENST00000457109 BCL9LQ86UU0 1499 aa12.78□□□□□ -0.36
PKP4-207ENST00000457109 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
PKP4-207ENST00000457109 VPS72Q15906 364 aa12.77□□□□□ -0.37
PKP4-207ENST00000457109 ANKARQ7Z5J8 1434 aa12.77□□□□□ -0.37
PKP4-207ENST00000457109 SEPT12Q8IYM1 358 aa12.76□□□□□ -0.37
PKP4-207ENST00000457109 COL22A1Q8NFW1 1626 aaPredicted RBP12.76□□□□□ -0.37
PKP4-207ENST00000457109 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
PKP4-207ENST00000457109 KIF1AQ12756 1690 aa12.74□□□□□ -0.37
PKP4-207ENST00000457109 DLC1Q96QB1 1528 aa12.74□□□□□ -0.37
PKP4-207ENST00000457109 NUDT16Q96DE0 195 aaKnown RBP12.74□□□□□ -0.37
PKP4-207ENST00000457109 BTG4Q9NY30 223 aa12.74□□□□□ -0.37
PKP4-207ENST00000457109 KNDC1Q76NI1 1749 aa12.74□□□□□ -0.37
PKP4-207ENST00000457109 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
PKP4-207ENST00000457109 CDK19Q9BWU1 502 aa12.73□□□□□ -0.37
PKP4-207ENST00000457109 IFT172Q9UG01 1749 aa12.73□□□□□ -0.37
PKP4-207ENST00000457109 FMN2Q9NZ56 1722 aa12.72□□□□□ -0.37
PKP4-207ENST00000457109 PRDM11Q9NQV5 511 aa12.72□□□□□ -0.37
PKP4-207ENST00000457109 SLIT2O94813 1529 aa12.72□□□□□ -0.37
PKP4-207ENST00000457109 RALGAPBQ86X10 1494 aa12.72□□□□□ -0.37
PKP4-207ENST00000457109 ONECUT3O60422 494 aaPredicted RBP12.71□□□□□ -0.37
PKP4-207ENST00000457109 EVA1CP58658 441 aa12.71□□□□□ -0.37
PKP4-207ENST00000457109 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
PKP4-207ENST00000457109 PRR36Q9H6K5 1346 aa12.7□□□□□ -0.38
PKP4-207ENST00000457109 SRPK2P78362 688 aaKnown RBP12.7□□□□□ -0.38
PKP4-207ENST00000457109 FAM98CQ17RN3 349 aaKnown RBP12.7□□□□□ -0.38
PKP4-207ENST00000457109 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
PKP4-207ENST00000457109 BAG6P46379 1132 aa12.68□□□□□ -0.38
PKP4-207ENST00000457109 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
PKP4-207ENST00000457109 ABTB2Q8N961 1025 aa12.68□□□□□ -0.38
PKP4-207ENST00000457109 ADGRB1O14514 1584 aa12.68□□□□□ -0.38
PKP4-207ENST00000457109 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
PKP4-207ENST00000457109 STRN4Q9NRL3 753 aa12.67□□□□□ -0.38
PKP4-207ENST00000457109 TULP4Q9NRJ4 1543 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms