RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 ADGRF5Q8IZF2 1346 aa32.11■■■□□ 2.73
TMEM56-203ENST00000456991 RGL3Q3MIN7 710 aa32.11■■■□□ 2.73
TMEM56-203ENST00000456991 FNBP4Q8N3X1 1017 aaPredicted RBP32.1■■■□□ 2.73
TMEM56-203ENST00000456991 TRPC5Q9UL62 973 aaPredicted RBP32.09■■■□□ 2.73
TMEM56-203ENST00000456991 CCDC144AA2RUR9 1427 aa32.09■■■□□ 2.73
TMEM56-203ENST00000456991 STK26Q9P289 416 aa32.08■■■□□ 2.73
TMEM56-203ENST00000456991 ANKRD30BQ9BXX2 1392 aa32.06■■■□□ 2.72
TMEM56-203ENST00000456991 FOXO3O43524 673 aa32.05■■■□□ 2.72
TMEM56-203ENST00000456991 MPHOSPH9Q99550 1183 aa32.05■■■□□ 2.72
TMEM56-203ENST00000456991 PPLO60437 1756 aa32.04■■■□□ 2.72
TMEM56-203ENST00000456991 WAPLQ7Z5K2 1190 aa32.04■■■□□ 2.72
TMEM56-203ENST00000456991 LRPPRCP42704 1394 aaKnown RBP32.02■■■□□ 2.72
TMEM56-203ENST00000456991 ABCC11Q96J66 1382 aa32.01■■■□□ 2.71
TMEM56-203ENST00000456991 SPATA31E1Q6ZUB1 1445 aa32■■■□□ 2.71
TMEM56-203ENST00000456991 CDC42BPGQ6DT37 1551 aa32■■■□□ 2.71
TMEM56-203ENST00000456991 NUTM2FA1L443 756 aa31.99■■■□□ 2.71
TMEM56-203ENST00000456991 XPCQ01831 940 aaPredicted RBP31.99■■■□□ 2.71
TMEM56-203ENST00000456991 TMEM132EQ6IEE7 984 aa31.99■■■□□ 2.71
TMEM56-203ENST00000456991 TECPR2O15040 1411 aa31.99■■■□□ 2.71
TMEM56-203ENST00000456991 ATAD2Q6PL18 1390 aa31.98■■■□□ 2.71
TMEM56-203ENST00000456991 MYOM2P54296 1465 aa31.97■■■□□ 2.71
TMEM56-203ENST00000456991 PXDNQ92626 1479 aa31.96■■■□□ 2.71
TMEM56-203ENST00000456991 ATRNO75882 1429 aa31.95■■■□□ 2.71
TMEM56-203ENST00000456991 COL22A1Q8NFW1 1626 aaPredicted RBP31.94■■■□□ 2.7
TMEM56-203ENST00000456991 PLEKHH1Q9ULM0 1364 aa31.92■■■□□ 2.7
TMEM56-203ENST00000456991 SIRT1Q96EB6 747 aa31.91■■■□□ 2.7
TMEM56-203ENST00000456991 ACIN1Q9UKV3 1341 aaKnown RBP31.9■■■□□ 2.7
TMEM56-203ENST00000456991 PIK3C2GO75747 1445 aa31.9■■■□□ 2.7
TMEM56-203ENST00000456991 BCL9LQ86UU0 1499 aa31.89■■■□□ 2.7
TMEM56-203ENST00000456991 YTHDC2Q9H6S0 1430 aaKnown RBP31.88■■■□□ 2.69
TMEM56-203ENST00000456991 GJD4Q96KN9 370 aaPredicted RBP31.87■■■□□ 2.69
TMEM56-203ENST00000456991 C14orf93Q9H972 538 aaKnown RBP31.87■■■□□ 2.69
TMEM56-203ENST00000456991 SPATA31A3Q5VYP0 1347 aa31.86■■■□□ 2.69
TMEM56-203ENST00000456991 KRT28Q7Z3Y7 464 aa31.85■■■□□ 2.69
TMEM56-203ENST00000456991 CCDC125Q86Z20 511 aa31.82■■■□□ 2.68
TMEM56-203ENST00000456991 UNC5CLQ8IV45 518 aa31.82■■■□□ 2.68
TMEM56-203ENST00000456991 DHX57Q6P158 1386 aaKnown RBP31.81■■■□□ 2.68
TMEM56-203ENST00000456991 PSME1Q06323 249 aa31.8■■■□□ 2.68
TMEM56-203ENST00000456991 CFAP70Q5T0N1 1121 aa31.8■■■□□ 2.68
TMEM56-203ENST00000456991 SRCAPQ6ZRS2 3230 aa31.8■■■□□ 2.68
TMEM56-203ENST00000456991 PHF8Q9UPP1 1060 aa31.79■■■□□ 2.68
TMEM56-203ENST00000456991 IFT172Q9UG01 1749 aa31.78■■■□□ 2.68
TMEM56-203ENST00000456991 KNDC1Q76NI1 1749 aa31.77■■■□□ 2.68
TMEM56-203ENST00000456991 HAP1P54257 671 aaPredicted RBP31.75■■■□□ 2.67
TMEM56-203ENST00000456991 ZRANB1Q9UGI0 708 aa31.75■■■□□ 2.67
TMEM56-203ENST00000456991 PRAM1Q96QH2 718 aa31.74■■■□□ 2.67
TMEM56-203ENST00000456991 SLIT2O94813 1529 aa31.73■■■□□ 2.67
TMEM56-203ENST00000456991 EP400Q96L91 3159 aa31.72■■■□□ 2.67
TMEM56-203ENST00000456991 FMN2Q9NZ56 1722 aa31.72■■■□□ 2.67
TMEM56-203ENST00000456991 SAFB2Q14151 953 aaKnown RBP eCLIP31.72■■■□□ 2.67
TMEM56-203ENST00000456991 NRXN1Q9ULB1 1477 aa31.72■■■□□ 2.67
TMEM56-203ENST00000456991 KIF1AQ12756 1690 aa31.71■■■□□ 2.67
TMEM56-203ENST00000456991 POGKQ9P215 609 aa31.71■■■□□ 2.67
TMEM56-203ENST00000456991 TNS3Q68CZ2 1445 aa31.69■■■□□ 2.66
TMEM56-203ENST00000456991 CABLES1Q8TDN4 633 aa31.69■■■□□ 2.66
TMEM56-203ENST00000456991 RALGAPBQ86X10 1494 aa31.69■■■□□ 2.66
TMEM56-203ENST00000456991 SBNO1A3KN83 1393 aa31.68■■■□□ 2.66
TMEM56-203ENST00000456991 LMOD2Q6P5Q4 547 aa31.68■■■□□ 2.66
TMEM56-203ENST00000456991 MARF1Q9Y4F3 1742 aaKnown RBP31.68■■■□□ 2.66
TMEM56-203ENST00000456991 PLEKHG5O94827 1062 aa31.66■■■□□ 2.66
TMEM56-203ENST00000456991 VPS72Q15906 364 aa31.65■■■□□ 2.66
TMEM56-203ENST00000456991 ARHGEF10O15013 1369 aa31.65■■■□□ 2.66
TMEM56-203ENST00000456991 SEPT12Q8IYM1 358 aa31.62■■■□□ 2.65
TMEM56-203ENST00000456991 PMFBP1Q8TBY8 1022 aa31.62■■■□□ 2.65
TMEM56-203ENST00000456991 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.61■■■□□ 2.65
TMEM56-203ENST00000456991 USP32Q8NFA0 1604 aa31.6■■■□□ 2.65
TMEM56-203ENST00000456991 ANKARQ7Z5J8 1434 aa31.6■■■□□ 2.65
TMEM56-203ENST00000456991 CCDC9Q9Y3X0 531 aaKnown RBP31.6■■■□□ 2.65
TMEM56-203ENST00000456991 GLI3P10071 1580 aa31.6■■■□□ 2.65
TMEM56-203ENST00000456991 TRAK1Q9UPV9 953 aa31.59■■■□□ 2.65
TMEM56-203ENST00000456991 BLMP54132 1417 aaPredicted RBP31.58■■■□□ 2.65
TMEM56-203ENST00000456991 RAB3GAP2Q9H2M9 1393 aa31.58■■■□□ 2.65
TMEM56-203ENST00000456991 ONECUT3O60422 494 aaPredicted RBP31.58■■■□□ 2.65
TMEM56-203ENST00000456991 DLC1Q96QB1 1528 aa31.58■■■□□ 2.65
TMEM56-203ENST00000456991 FAM83GA6ND36 823 aa31.57■■■□□ 2.64
TMEM56-203ENST00000456991 SF3B2Q13435 895 aaKnown RBP31.55■■■□□ 2.64
TMEM56-203ENST00000456991 HIRIP3Q9BW71 556 aaPredicted RBP31.55■■■□□ 2.64
TMEM56-203ENST00000456991 KDM2AQ9Y2K7 1162 aa31.54■■■□□ 2.64
TMEM56-203ENST00000456991 STAC3Q96MF2 364 aa31.53■■■□□ 2.64
TMEM56-203ENST00000456991 GPRASP1Q5JY77 1395 aa31.53■■■□□ 2.64
TMEM56-203ENST00000456991 KRT27Q7Z3Y8 459 aa31.52■■■□□ 2.64
TMEM56-203ENST00000456991 DCAF11Q8TEB1 546 aa31.52■■■□□ 2.64
TMEM56-203ENST00000456991 EIF3AQ14152 1382 aaKnown RBP31.52■■■□□ 2.64
TMEM56-203ENST00000456991 MINK1Q8N4C8 1332 aaPredicted RBP31.51■■■□□ 2.64
TMEM56-203ENST00000456991 RGPD8O14715 1765 aaPredicted RBP31.51■■■□□ 2.64
TMEM56-203ENST00000456991 DEFB132Q7Z7B7 95 aa31.5■■■□□ 2.63
TMEM56-203ENST00000456991 ADGRB1O14514 1584 aa31.49■■■□□ 2.63
TMEM56-203ENST00000456991 WASLO00401 505 aaPredicted RBP31.49■■■□□ 2.63
TMEM56-203ENST00000456991 BTG4Q9NY30 223 aa31.47■■■□□ 2.63
TMEM56-203ENST00000456991 PRR36Q9H6K5 1346 aa31.47■■■□□ 2.63
TMEM56-203ENST00000456991 A0A0G2JS52 829 aa31.46■■■□□ 2.63
TMEM56-203ENST00000456991 MYT1Q01538 1121 aa31.46■■■□□ 2.63
TMEM56-203ENST00000456991 ADGRB2O60241 1585 aa31.46■■■□□ 2.63
TMEM56-203ENST00000456991 NGDNQ8NEJ9 315 aaKnown RBP31.45■■■□□ 2.63
TMEM56-203ENST00000456991 NWD2Q9ULI1 1742 aa31.44■■■□□ 2.62
TMEM56-203ENST00000456991 FAM98CQ17RN3 349 aaKnown RBP31.42■■■□□ 2.62
TMEM56-203ENST00000456991 PAK3O75914 559 aaPredicted RBP31.41■■■□□ 2.62
TMEM56-203ENST00000456991 PLCH1Q4KWH8 1693 aa31.4■■■□□ 2.62
TMEM56-203ENST00000456991 TULP4Q9NRJ4 1543 aa31.39■■■□□ 2.62
TMEM56-203ENST00000456991 HRCP23327 699 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms