RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 WAPLQ7Z5K2 1190 aa17.65■□□□□ 0.42
PDGFB-204ENST00000455790 PNPLA6Q8IY17 1366 aa17.65■□□□□ 0.42
PDGFB-204ENST00000455790 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
PDGFB-204ENST00000455790 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
PDGFB-204ENST00000455790 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
PDGFB-204ENST00000455790 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
PDGFB-204ENST00000455790 MEX3CQ5U5Q3 659 aaKnown RBP17.63■□□□□ 0.41
PDGFB-204ENST00000455790 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
PDGFB-204ENST00000455790 LRRC59Q96AG4 307 aaKnown RBP17.61■□□□□ 0.41
PDGFB-204ENST00000455790 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
PDGFB-204ENST00000455790 SOS2Q07890 1332 aaPredicted RBP17.6■□□□□ 0.41
PDGFB-204ENST00000455790 NUTM2FA1L443 756 aa17.59■□□□□ 0.41
PDGFB-204ENST00000455790 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.4
PDGFB-204ENST00000455790 ADGRB1O14514 1584 aa17.57■□□□□ 0.4
PDGFB-204ENST00000455790 HRCP23327 699 aa17.57■□□□□ 0.4
PDGFB-204ENST00000455790 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
PDGFB-204ENST00000455790 PXDNQ92626 1479 aa17.56■□□□□ 0.4
PDGFB-204ENST00000455790 DHX57Q6P158 1386 aaKnown RBP17.55■□□□□ 0.4
PDGFB-204ENST00000455790 AFF2P51816 1311 aa17.55■□□□□ 0.4
PDGFB-204ENST00000455790 XPCQ01831 940 aaPredicted RBP17.55■□□□□ 0.4
PDGFB-204ENST00000455790 ZNF772Q68DY9 489 aaPredicted RBP17.55■□□□□ 0.4
PDGFB-204ENST00000455790 DLC1Q96QB1 1528 aa17.53■□□□□ 0.4
PDGFB-204ENST00000455790 SAFB2Q14151 953 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDGFB-204ENST00000455790 C8orf37Q96NL8 207 aa17.53■□□□□ 0.4
PDGFB-204ENST00000455790 PRAM1Q96QH2 718 aa17.53■□□□□ 0.4
PDGFB-204ENST00000455790 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
PDGFB-204ENST00000455790 COL22A1Q8NFW1 1626 aaPredicted RBP17.53■□□□□ 0.4
PDGFB-204ENST00000455790 NPHP3Q7Z494 1330 aa17.52■□□□□ 0.4
PDGFB-204ENST00000455790 FOXO3O43524 673 aa17.52■□□□□ 0.4
PDGFB-204ENST00000455790 ADAMTS2O95450 1211 aa17.52■□□□□ 0.4
PDGFB-204ENST00000455790 DCAF11Q8TEB1 546 aa17.52■□□□□ 0.4
PDGFB-204ENST00000455790 SIRT1Q96EB6 747 aa17.52■□□□□ 0.4
PDGFB-204ENST00000455790 KIF1AQ12756 1690 aa17.49■□□□□ 0.39
PDGFB-204ENST00000455790 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
PDGFB-204ENST00000455790 RGPD8O14715 1765 aaPredicted RBP17.48■□□□□ 0.39
PDGFB-204ENST00000455790 USP32Q8NFA0 1604 aa17.47■□□□□ 0.39
PDGFB-204ENST00000455790 TRAK1Q9UPV9 953 aa17.47■□□□□ 0.39
PDGFB-204ENST00000455790 RXRBP28702 533 aa17.46■□□□□ 0.39
PDGFB-204ENST00000455790 POGKQ9P215 609 aa17.46■□□□□ 0.39
PDGFB-204ENST00000455790 NGLY1Q96IV0 654 aa17.45■□□□□ 0.38
PDGFB-204ENST00000455790 HIRIP3Q9BW71 556 aaPredicted RBP17.45■□□□□ 0.38
PDGFB-204ENST00000455790 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
PDGFB-204ENST00000455790 RGS12O14924 1447 aa17.44■□□□□ 0.38
PDGFB-204ENST00000455790 PHF8Q9UPP1 1060 aa17.43■□□□□ 0.38
PDGFB-204ENST00000455790 ARHGEF28Q8N1W1 1705 aaKnown RBP17.43■□□□□ 0.38
PDGFB-204ENST00000455790 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
PDGFB-204ENST00000455790 MINK1Q8N4C8 1332 aaPredicted RBP17.43■□□□□ 0.38
PDGFB-204ENST00000455790 ANKARQ7Z5J8 1434 aa17.42■□□□□ 0.38
PDGFB-204ENST00000455790 KRT28Q7Z3Y7 464 aa17.42■□□□□ 0.38
PDGFB-204ENST00000455790 QTRT2Q9H974 415 aaKnown RBP17.42■□□□□ 0.38
PDGFB-204ENST00000455790 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
PDGFB-204ENST00000455790 STAC3Q96MF2 364 aa17.41■□□□□ 0.38
PDGFB-204ENST00000455790 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
PDGFB-204ENST00000455790 FNBP4Q8N3X1 1017 aaPredicted RBP17.4■□□□□ 0.38
PDGFB-204ENST00000455790 USP21Q9UK80 565 aa17.4■□□□□ 0.38
PDGFB-204ENST00000455790 MARF1Q9Y4F3 1742 aaKnown RBP17.4■□□□□ 0.38
PDGFB-204ENST00000455790 TULP4Q9NRJ4 1543 aa17.4■□□□□ 0.38
PDGFB-204ENST00000455790 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
PDGFB-204ENST00000455790 PMFBP1Q8TBY8 1022 aa17.39■□□□□ 0.37
PDGFB-204ENST00000455790 ATRNO75882 1429 aa17.38■□□□□ 0.37
PDGFB-204ENST00000455790 BCL9LQ86UU0 1499 aa17.37■□□□□ 0.37
PDGFB-204ENST00000455790 SBNO1A3KN83 1393 aa17.37■□□□□ 0.37
PDGFB-204ENST00000455790 ABCA3Q99758 1704 aa17.36■□□□□ 0.37
PDGFB-204ENST00000455790 KIAA1210Q9ULL0 1709 aa17.36■□□□□ 0.37
PDGFB-204ENST00000455790 WASLO00401 505 aaPredicted RBP17.36■□□□□ 0.37
PDGFB-204ENST00000455790 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
PDGFB-204ENST00000455790 UPF1Q92900 1129 aaKnown RBP eCLIP17.36■□□□□ 0.37
PDGFB-204ENST00000455790 TRPM3Q9HCF6 1732 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-204ENST00000455790 CABLES1Q8TDN4 633 aa17.35■□□□□ 0.37
PDGFB-204ENST00000455790 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-204ENST00000455790 EIF3AQ14152 1382 aaKnown RBP17.35■□□□□ 0.37
PDGFB-204ENST00000455790 ATP7BP35670 1465 aa17.35■□□□□ 0.37
PDGFB-204ENST00000455790 NBPF1Q3BBV0 1214 aa17.34■□□□□ 0.37
PDGFB-204ENST00000455790 SLIT2O94813 1529 aa17.33■□□□□ 0.37
PDGFB-204ENST00000455790 PSME1Q06323 249 aa17.33■□□□□ 0.36
PDGFB-204ENST00000455790 ARHGEF10O15013 1369 aa17.32■□□□□ 0.36
PDGFB-204ENST00000455790 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
PDGFB-204ENST00000455790 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.31■□□□□ 0.36
PDGFB-204ENST00000455790 SIN3AQ96ST3 1273 aa17.31■□□□□ 0.36
PDGFB-204ENST00000455790 ALS2Q96Q42 1657 aa17.31■□□□□ 0.36
PDGFB-204ENST00000455790 L3MBTL2Q969R5 705 aa17.3■□□□□ 0.36
PDGFB-204ENST00000455790 EP400Q96L91 3159 aa17.3■□□□□ 0.36
PDGFB-204ENST00000455790 PLCH1Q4KWH8 1693 aa17.29■□□□□ 0.36
PDGFB-204ENST00000455790 GLI3P10071 1580 aa17.29■□□□□ 0.36
PDGFB-204ENST00000455790 ITSN1Q15811 1721 aa17.29■□□□□ 0.36
PDGFB-204ENST00000455790 TOPAZ1Q8N9V7 1692 aa17.29■□□□□ 0.36
PDGFB-204ENST00000455790 GPRASP1Q5JY77 1395 aa17.28■□□□□ 0.36
PDGFB-204ENST00000455790 HAP1P54257 671 aaPredicted RBP17.28■□□□□ 0.36
PDGFB-204ENST00000455790 NUDT16Q96DE0 195 aaKnown RBP17.28■□□□□ 0.36
PDGFB-204ENST00000455790 RALGAPBQ86X10 1494 aa17.28■□□□□ 0.36
PDGFB-204ENST00000455790 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
PDGFB-204ENST00000455790 CDK19Q9BWU1 502 aa17.27■□□□□ 0.36
PDGFB-204ENST00000455790 NGDNQ8NEJ9 315 aaKnown RBP17.26■□□□□ 0.35
PDGFB-204ENST00000455790 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
PDGFB-204ENST00000455790 CRYBG1Q9Y4K1 1723 aa17.26■□□□□ 0.35
PDGFB-204ENST00000455790 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
PDGFB-204ENST00000455790 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
PDGFB-204ENST00000455790 ATAD2Q6PL18 1390 aa17.24■□□□□ 0.35
PDGFB-204ENST00000455790 NWD2Q9ULI1 1742 aa17.24■□□□□ 0.35
PDGFB-204ENST00000455790 CENPJQ9HC77 1338 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms